FFCP PHASE1:Hg19::chr1:89357240..89357257,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:89357240..89357257,- to FFCP PHASE1:Hg19::chr1:89357240..89357257,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2959 | |EntrezGene=2959 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4648 | |HGNC=4648 | ||
|TSSclassifier=strong | |||
|UniProt=B1APE2 | |UniProt=B1APE2 | ||
|association_with_transcript=14bp_to_ENST00000418217_5end | |||
|cluster_id=chr1:89357240..89357257,- | |||
|coexpression_cluster_id=C4003 | |||
|description=CAGE_peak_1_at_GTF2B_5end | |||
|id=chr1:89357240..89357257,- | |||
|ontology_enrichment_celltype=CL:0000037!1.47e-57!172;CL:0000566!1.47e-57!172;CL:0000738!4.54e-54!140;CL:0002032!1.54e-53!165;CL:0000837!1.54e-53!165;CL:0000988!4.03e-52!182;CL:0002031!4.54e-48!124;CL:0002087!2.96e-45!119;CL:0000763!2.94e-32!112;CL:0000049!2.94e-32!112;CL:0000766!1.37e-30!76;CL:0000839!3.16e-27!70;CL:0000557!1.14e-26!71;CL:0002009!3.89e-25!65;CL:0002057!3.60e-24!42;CL:0002194!5.68e-24!63;CL:0000576!5.68e-24!63;CL:0000040!5.68e-24!63;CL:0000559!5.68e-24!63;CL:0000860!7.22e-23!45;CL:0000134!5.51e-20!358;CL:0002320!6.10e-19!365;CL:0000542!1.32e-18!53;CL:0000051!1.32e-18!53;CL:0000838!2.65e-18!52;CL:0000219!2.89e-14!390;CL:0000084!6.63e-10!25;CL:0000827!6.63e-10!25;CL:0000791!1.13e-09!18;CL:0000789!1.13e-09!18;CL:0002420!1.13e-09!18;CL:0002419!1.13e-09!18;CL:0000790!1.13e-09!18;CL:0000048!9.15e-09!430;CL:0000723!2.73e-08!436;CL:0000945!4.83e-08!24;CL:0000826!4.83e-08!24;CL:0000034!1.23e-07!444;CL:0000236!5.39e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.18e-19;33!CL:0002057;2.18e-19;33!CL:0000473;2.84e-16;39!CL:0000234;2.84e-16;39!CL:0000576;5.60e-16;48!CL:0000766;9.35e-14;69!CL:0002087;9.98e-14;104!CL:0000738;6.16e-12;136!CL:0000542;3.16e-11;53!CL:0000763;2.64e-10;100!CL:0000084;7.05e-10;25!CL:0000791;1.13e-09;18!CL:0000789;1.13e-09;18!CL:0002419;1.13e-09;18!CL:0000988;1.50e-09;177!CL:0000945;4.66e-08;24!CL:0000219;2.26e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.52e-59,168;CL:0000738,9.38e-56,136;CL:0002032,6.15e-55,161;CL:0000837,6.15e-55,161;CL:0000988,1.89e-54,177;CL:0002031,8.62e-50,120;CL:0002087,5.88e-47,115;CL:0000763,1.37e-33,108;CL:0000049,1.37e-33,108;CL:0000766,1.85e-32,72;CL:0000839,4.81e-29,66;CL:0000557,1.98e-28,67;CL:0002009,5.95e-27,61;CL:0002194,9.21e-26,59;CL:0000576,9.21e-26,59;CL:0000040,9.21e-26,59;CL:0000559,9.21e-26,59;CL:0000473,3.57e-24,48;CL:0000234,3.57e-24,48;CL:0000860,3.60e-24,42;CL:0002057,3.60e-24,42;CL:0000134,1.94e-20,354;CL:0002320,2.26e-19,361;CL:0000542,1.32e-18,53;CL:0000051,1.32e-18,53;CL:0000838,2.65e-18,52;CL:0000219,1.30e-14,386;CL:0000084,6.63e-10,25;CL:0000827,6.63e-10,25;CL:0000791,1.13e-09,18;CL:0000789,1.13e-09,18;CL:0002420,1.13e-09,18;CL:0002419,1.13e-09,18;CL:0000790,1.13e-09,18;CL:0000048,7.75e-09,427;CL:0000723,2.33e-08,433;CL:0000945,4.83e-08,24;CL:0000826,4.83e-08,24;CL:0000034,1.06e-07,441;CL:0000236,5.39e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;1.11e-17;42!CL:0000051;3.16e-11;53!CL:0000790;1.13e-09;18!CL:0000049;1.75e-09;108 | |||
|ontology_enrichment_disease=DOID:2531!9.68e-07!51;DOID:0060083!9.68e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,9.68e-07,51;DOID:0060083,9.68e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.27e-31!102;UBERON:0003061!1.27e-31!102;UBERON:0002193!5.42e-26!112;UBERON:0001474!3.40e-24!86;UBERON:0002371!4.30e-24!80;UBERON:0004765!2.66e-18!101;UBERON:0001434!2.66e-18!101;UBERON:0002384!3.26e-18!375;UBERON:0002405!3.30e-15!115;UBERON:0000178!1.63e-07!15;UBERON:0000179!1.63e-07!15;UBERON:0000463!1.63e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.63e-07;15!UBERON:0000179;1.63e-07;15!UBERON:0000463;1.63e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.63e-33,98;UBERON:0003061,4.63e-33,98;UBERON:0002193,4.35e-27,108;UBERON:0001474,1.59e-25,82;UBERON:0002371,1.63e-25,76;UBERON:0004765,1.63e-23,90;UBERON:0002405,7.79e-21,93;UBERON:0001434,7.19e-19,100;UBERON:0002384,1.26e-18,371;UBERON:0000178,1.63e-07,15;UBERON:0000179,1.63e-07,15;UBERON:0000463,1.63e-07,15 | |||
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|short_description=p1@GTF2B | |||
}} | }} |
Latest revision as of 16:00, 19 September 2015
Short description: | p1@GTF2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GTF2B_5end |
Coexpression cluster: | C4003_CD14_CD4_immature_CD8_Natural_Neutrophils_CD19 |
Association with transcript: | 14bp_to_ENST00000418217_5end |
EntrezGene: | GTF2B |
HGNC: | 4648 |
UniProt: | B1APE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.63e-33 | 98 |
blood island | 4.63e-33 | 98 |
hemolymphoid system | 4.35e-27 | 108 |
bone element | 1.59e-25 | 82 |
bone marrow | 1.63e-25 | 76 |
skeletal element | 1.63e-23 | 90 |
immune system | 7.79e-21 | 93 |
skeletal system | 7.19e-19 | 100 |
connective tissue | 1.26e-18 | 371 |
blood | 1.63e-07 | 15 |
haemolymphatic fluid | 1.63e-07 | 15 |
organism substance | 1.63e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 9.68e-07 | 51 |
immune system cancer | 9.68e-07 | 51 |