FFCP PHASE1:Hg19::chr19:52264153..52264175,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2358 | |EntrezGene=2358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3827 | |HGNC=3827 | ||
|TSSclassifier=strong | |||
|UniProt=P25090 | |UniProt=P25090 | ||
|association_with_transcript=-7bp_to_ENST00000340023_5end | |association_with_transcript=-7bp_to_ENST00000340023_5end | ||
|cluster_id=chr19:52264153..52264175,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_4_at_FPR2_5end | |description=CAGE_peak_4_at_FPR2_5end | ||
|id=chr19:52264153..52264175,+ | |id=chr19:52264153..52264175,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.91e-68!42;CL:0000766!1.02e-63!76;CL:0000860!2.51e-62!45;CL:0002194!2.43e-60!63;CL:0000576!2.43e-60!63;CL:0000040!2.43e-60!63;CL:0000559!2.43e-60!63;CL:0002009!5.75e-58!65;CL:0000839!1.27e-52!70;CL:0000557!1.21e-51!71;CL:0000763!1.42e-46!112;CL:0000049!1.42e-46!112;CL:0000738!1.76e-34!140;CL:0002087!7.11e-33!119;CL:0000037!1.01e-30!172;CL:0000566!1.01e-30!172;CL:0002032!1.99e-29!165;CL:0000837!1.99e-29!165;CL:0000988!7.36e-28!182;CL:0002031!4.94e-27!124;CL:0002393!6.06e-14!9;CL:0002397!6.06e-14!9;CL:0000094!6.15e-10!8;CL:0000134!3.65e-08!358;CL:0002320!1.18e-07!365;CL:0000081!7.51e-07!11 | |ontology_enrichment_celltype=CL:0002057!6.91e-68!42;CL:0000766!1.02e-63!76;CL:0000860!2.51e-62!45;CL:0002194!2.43e-60!63;CL:0000576!2.43e-60!63;CL:0000040!2.43e-60!63;CL:0000559!2.43e-60!63;CL:0002009!5.75e-58!65;CL:0000839!1.27e-52!70;CL:0000557!1.21e-51!71;CL:0000763!1.42e-46!112;CL:0000049!1.42e-46!112;CL:0000738!1.76e-34!140;CL:0002087!7.11e-33!119;CL:0000037!1.01e-30!172;CL:0000566!1.01e-30!172;CL:0002032!1.99e-29!165;CL:0000837!1.99e-29!165;CL:0000988!7.36e-28!182;CL:0002031!4.94e-27!124;CL:0002393!6.06e-14!9;CL:0002397!6.06e-14!9;CL:0000094!6.15e-10!8;CL:0000134!3.65e-08!358;CL:0002320!1.18e-07!365;CL:0000081!7.51e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.47e-95;33!CL:0002057;3.47e-95;33!CL:0000576;3.40e-80;48!CL:0000473;2.24e-79;39!CL:0000234;2.24e-79;39!CL:0000766;3.55e-52;69!CL:0000763;4.91e-23;100!CL:0002087;1.09e-17;104!CL:0000738;1.40e-14;136!CL:0002393;9.88e-13;6!CL:0002397;9.88e-13;6!CL:0000775;5.86e-11;3!CL:0000875;1.14e-09;3!CL:0002619;1.14e-09;3!CL:0002396;1.14e-09;3!CL:0000988;1.57e-07;177!CL:0000094;6.40e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.58e-124,42;CL:0002057,2.58e-124,42;CL:0000473,7.88e-124,48;CL:0000234,7.88e-124,48;CL:0002194,7.87e-111,59;CL:0000576,7.87e-111,59;CL:0000040,7.87e-111,59;CL:0000559,7.87e-111,59;CL:0002009,6.89e-107,61;CL:0000766,8.60e-107,72;CL:0000839,4.63e-98,66;CL:0000557,1.88e-96,67;CL:0000763,1.36e-67,108;CL:0000049,1.36e-67,108;CL:0002087,8.15e-52,115;CL:0000738,2.43e-51,136;CL:0002031,3.34e-49,120;CL:0002032,1.42e-41,161;CL:0000837,1.42e-41,161;CL:0000037,2.34e-39,168;CL:0000988,9.21e-37,177;CL:0002393,1.98e-20,9;CL:0002397,1.98e-20,9;CL:0000134,2.63e-13,354;CL:0002320,8.11e-13,361;CL:0000219,4.23e-11,386;CL:0000775,5.14e-11,3;CL:0000048,1.15e-09,427;CL:0000875,1.29e-09,3;CL:0002396,1.29e-09,3;CL:0002619,1.37e-09,3;CL:0000723,2.29e-09,433;CL:0000034,5.58e-09,441;CL:0000094,5.65e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.55e-89;42!CL:0000049;4.74e-21;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.49e-57!102;UBERON:0003061!1.49e-57!102;UBERON:0002193!1.58e-50!112;UBERON:0002371!1.02e-45!80;UBERON:0001474!2.44e-41!86;UBERON:0002405!2.60e-36!115;UBERON:0004765!4.75e-34!101;UBERON:0001434!4.75e-34!101;UBERON:0003081!3.16e-21!216;UBERON:0002204!1.10e-16!167;UBERON:0000178!1.23e-11!15;UBERON:0000179!1.23e-11!15;UBERON:0000463!1.23e-11!15;UBERON:0007023!4.10e-09!115;UBERON:0000926!1.73e-07!448;UBERON:0004120!1.73e-07!448;UBERON:0006603!1.73e-07!448;UBERON:0002384!5.71e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.05e-12;15!UBERON:0000179;2.05e-12;15!UBERON:0000463;2.05e-12;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.79e-92,98;UBERON:0003061,2.79e-92,98;UBERON:0002371,7.62e-84,76;UBERON:0002193,1.09e-82,108;UBERON:0001474,5.86e-77,82;UBERON:0002405,1.20e-69,93;UBERON:0004765,3.45e-69,90;UBERON:0001434,3.30e-61,100;UBERON:0003081,4.03e-40,203;UBERON:0002204,1.36e-35,167;UBERON:0000926,1.60e-22,315;UBERON:0004120,1.60e-22,315;UBERON:0006603,1.60e-22,315;UBERON:0000178,1.97e-12,15;UBERON:0000179,1.97e-12,15;UBERON:0000463,1.97e-12,15;UBERON:0002384,3.76e-12,371;UBERON:0000923,1.55e-07,560;UBERON:0010316,1.55e-07,560;UBERON:0005291,1.55e-07,560;UBERON:0006598,1.55e-07,560;UBERON:0010317,1.55e-07,560;UBERON:0002532,1.55e-07,560;UBERON:0002050,2.17e-07,564;UBERON:0005423,8.51e-07,581 | |||
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|short_description=p4@FPR2 | |short_description=p4@FPR2 | ||
}} | }} |
Latest revision as of 16:00, 19 September 2015
Short description: | p4@FPR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FPR2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -7bp_to_ENST00000340023_5end |
EntrezGene: | FPR2 |
HGNC: | 3827 |
UniProt: | P25090 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.79e-92 | 98 |
blood island | 2.79e-92 | 98 |
bone marrow | 7.62e-84 | 76 |
hemolymphoid system | 1.09e-82 | 108 |
bone element | 5.86e-77 | 82 |
immune system | 1.20e-69 | 93 |
skeletal element | 3.45e-69 | 90 |
skeletal system | 3.30e-61 | 100 |
lateral plate mesoderm | 4.03e-40 | 203 |
musculoskeletal system | 1.36e-35 | 167 |
mesoderm | 1.60e-22 | 315 |
mesoderm-derived structure | 1.60e-22 | 315 |
presumptive mesoderm | 1.60e-22 | 315 |
blood | 1.97e-12 | 15 |
haemolymphatic fluid | 1.97e-12 | 15 |
organism substance | 1.97e-12 | 15 |
connective tissue | 3.76e-12 | 371 |
germ layer | 1.55e-07 | 560 |
germ layer / neural crest | 1.55e-07 | 560 |
embryonic tissue | 1.55e-07 | 560 |
presumptive structure | 1.55e-07 | 560 |
germ layer / neural crest derived structure | 1.55e-07 | 560 |
epiblast (generic) | 1.55e-07 | 560 |
embryonic structure | 2.17e-07 | 564 |
developing anatomical structure | 8.51e-07 | 581 |