FFCP PHASE1:Hg19::chrX:13707235..13707286,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9367 | |EntrezGene=9367 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9792 | |HGNC=9792 | ||
|TSSclassifier=strong | |||
|UniProt=P51151 | |UniProt=P51151 | ||
|association_with_transcript=0bp_to_ENST00000464506,NM_001195328,NM_004251_5end | |association_with_transcript=0bp_to_ENST00000464506,NM_001195328,NM_004251_5end | ||
|cluster_id=chrX:13707235..13707286,+ | |||
|coexpression_cluster_id=C61 | |coexpression_cluster_id=C61 | ||
|description=CAGE_peak_1_at_RAB9A_5end | |description=CAGE_peak_1_at_RAB9A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002009!1.63e-21!65;CL:0002194!1.88e-20!63;CL:0000576!1.88e-20!63;CL:0000040!1.88e-20!63;CL:0000559!1.88e-20!63;CL:0000557!2.30e-20!71;CL:0000860!6.90e-20!45;CL:0002057!2.17e-19!42;CL:0000839!9.49e-19!70;CL:0000766!1.42e-15!76;CL:0002031!5.75e-15!124;CL:0002087!6.31e-14!119;CL:0000738!3.91e-13!140 | |ontology_enrichment_celltype=CL:0002009!1.63e-21!65;CL:0002194!1.88e-20!63;CL:0000576!1.88e-20!63;CL:0000040!1.88e-20!63;CL:0000559!1.88e-20!63;CL:0000557!2.30e-20!71;CL:0000860!6.90e-20!45;CL:0002057!2.17e-19!42;CL:0000839!9.49e-19!70;CL:0000766!1.42e-15!76;CL:0002031!5.75e-15!124;CL:0002087!6.31e-14!119;CL:0000738!3.91e-13!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.06e-17;33!CL:0002057;5.06e-17;33!CL:0000473;1.73e-16;39!CL:0000234;1.73e-16;39!CL:0000576;1.65e-12;48!CL:0000766;4.11e-08;69 | |ontology_enrichment_celltype_v019=CL:0000860;5.06e-17;33!CL:0002057;5.06e-17;33!CL:0000473;1.73e-16;39!CL:0000234;1.73e-16;39!CL:0000576;1.65e-12;48!CL:0000766;4.11e-08;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.10e-22,48;CL:0000234,3.10e-22,48;CL:0002009,2.33e-21,61;CL:0002194,2.72e-20,59;CL:0000576,2.72e-20,59;CL:0000040,2.72e-20,59;CL:0000559,2.72e-20,59;CL:0000557,3.93e-20,67;CL:0000860,2.17e-19,42;CL:0002057,2.17e-19,42;CL:0000839,1.72e-18,66;CL:0000766,3.09e-15,72;CL:0002031,1.55e-14,120;CL:0002087,1.67e-13,115;CL:0000738,1.05e-12,136 | |||
|ontology_enrichment_development_v019=CL:0002057;2.13e-14;42 | |ontology_enrichment_development_v019=CL:0002057;2.13e-14;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.89e-18!80;UBERON:0001474!1.37e-14!86;UBERON:0004765!1.68e-14!101;UBERON:0001434!1.68e-14!101;UBERON:0002390!7.90e-14!102;UBERON:0003061!7.90e-14!102;UBERON:0002193!1.28e-11!112;UBERON:0002405!2.49e-09!115;UBERON:0002204!4.99e-08!167;UBERON:0000062!2.16e-07!511 | |ontology_enrichment_uberon=UBERON:0002371!8.89e-18!80;UBERON:0001474!1.37e-14!86;UBERON:0004765!1.68e-14!101;UBERON:0001434!1.68e-14!101;UBERON:0002390!7.90e-14!102;UBERON:0003061!7.90e-14!102;UBERON:0002193!1.28e-11!112;UBERON:0002405!2.49e-09!115;UBERON:0002204!4.99e-08!167;UBERON:0000062!2.16e-07!511 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.88e-17,76;UBERON:0004765,6.78e-15,90;UBERON:0001474,3.25e-14,82;UBERON:0001434,3.53e-14,100;UBERON:0002390,2.01e-13,98;UBERON:0003061,2.01e-13,98;UBERON:0002405,1.03e-12,93;UBERON:0002193,3.30e-11,108;UBERON:0002204,4.99e-08,167 | |||
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|short_description=p1@RAB9A | |short_description=p1@RAB9A | ||
}} | }} |
Latest revision as of 15:58, 19 September 2015
Short description: | p1@RAB9A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAB9A_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | 0bp_to_ENST00000464506, NM_001195328, NM_004251_5end |
EntrezGene: | RAB9A |
HGNC: | 9792 |
UniProt: | P51151 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.10e-22 | 48 |
phagocyte | 3.10e-22 | 48 |
macrophage dendritic cell progenitor | 2.33e-21 | 61 |
monopoietic cell | 2.72e-20 | 59 |
monocyte | 2.72e-20 | 59 |
monoblast | 2.72e-20 | 59 |
promonocyte | 2.72e-20 | 59 |
granulocyte monocyte progenitor cell | 3.93e-20 | 67 |
classical monocyte | 2.17e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.17e-19 | 42 |
myeloid lineage restricted progenitor cell | 1.72e-18 | 66 |
myeloid leukocyte | 3.09e-15 | 72 |
hematopoietic lineage restricted progenitor cell | 1.55e-14 | 120 |
nongranular leukocyte | 1.67e-13 | 115 |
leukocyte | 1.05e-12 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.88e-17 | 76 |
skeletal element | 6.78e-15 | 90 |
bone element | 3.25e-14 | 82 |
skeletal system | 3.53e-14 | 100 |
hematopoietic system | 2.01e-13 | 98 |
blood island | 2.01e-13 | 98 |
immune system | 1.03e-12 | 93 |
hemolymphoid system | 3.30e-11 | 108 |
musculoskeletal system | 4.99e-08 | 167 |