FFCP PHASE1:Hg19::chr1:8934931..8934947,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:8934931..8934947,-
|short_description=p4@ENO1
|description=CAGE_peak_4_at_ENO1_5end
|association_with_transcript=28bp_to_ENST00000463324_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2023 | |EntrezGene=2023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3350 | |HGNC=3350 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENST00000463324_5end | |||
|cluster_id=chr1:8934931..8934947,- | |||
|coexpression_cluster_id=C3324 | |||
|description=CAGE_peak_4_at_ENO1_5end | |||
|id=chr1:8934931..8934947,- | |||
|ontology_enrichment_celltype=CL:0000548!2.28e-17!679;CL:0000004!2.28e-17!679;CL:0000255!2.28e-17!679;CL:0000012!1.03e-16!682;CL:0002321!1.55e-13!248;CL:0000220!3.53e-13!246;CL:0000055!1.75e-11!180;CL:0000144!2.82e-11!625;CL:0000003!5.84e-11!722;CL:0000066!1.48e-10!254;CL:0002371!1.80e-10!591;CL:0000222!1.53e-09!119;CL:0000063!9.12e-09!578;CL:0000393!2.82e-07!60;CL:0000211!2.82e-07!60;CL:0000680!7.90e-07!57;CL:0000056!7.90e-07!57;CL:0000355!7.90e-07!57 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.97e-13,250;CL:0000222,4.04e-10,121;CL:0000066,1.97e-09,253;CL:0000393,2.13e-07,61;CL:0000211,2.13e-07,61;CL:0000680,6.08e-07,58;CL:0000056,6.08e-07,58;CL:0000355,6.08e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.64e-09!118;UBERON:0001637!3.86e-09!42;UBERON:0003509!3.86e-09!42;UBERON:0004572!3.86e-09!42;UBERON:0000490!2.13e-08!138;UBERON:0005256!1.09e-07!143;UBERON:0001981!1.30e-07!60;UBERON:0007500!1.30e-07!60;UBERON:0004537!1.30e-07!60;UBERON:0006965!1.30e-07!60;UBERON:0004290!1.68e-07!70;UBERON:0004872!3.23e-07!84;UBERON:0000914!5.31e-07!83;UBERON:0002329!5.31e-07!83;UBERON:0003077!5.31e-07!83;UBERON:0003059!5.31e-07!83;UBERON:0007282!5.31e-07!83;UBERON:0009618!5.31e-07!83;UBERON:0007285!5.31e-07!83;UBERON:0000486!7.70e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.73e-07;42!UBERON:0003509;9.73e-07;42!UBERON:0004572;9.73e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,6.48e-10,148;UBERON:0003914,9.68e-10,117;UBERON:0001637,2.62e-09,42;UBERON:0003509,2.62e-09,42;UBERON:0004572,2.62e-09,42;UBERON:0007503,4.86e-09,78;UBERON:0007500,5.87e-08,59;UBERON:0001981,5.87e-08,59;UBERON:0004537,5.87e-08,59;UBERON:0006965,5.87e-08,59;UBERON:0007524,1.05e-07,73;UBERON:0002329,1.05e-07,71;UBERON:0003059,1.05e-07,71;UBERON:0007282,1.05e-07,71;UBERON:0004290,1.05e-07,71;UBERON:0009618,1.05e-07,71;UBERON:0003077,1.12e-07,72;UBERON:0007285,1.12e-07,72;UBERON:0004872,1.17e-07,83;UBERON:0005256,2.29e-07,122;UBERON:0000486,8.87e-07,83 | |||
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| ||
|short_description=p4@ENO1 | |||
}} | }} |
Latest revision as of 15:55, 19 September 2015
Short description: | p4@ENO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENO1_5end |
Coexpression cluster: | C3324_Smooth_Tracheal_mucinous_Bronchial_chronic_iPS_testicular |
Association with transcript: | 28bp_to_ENST00000463324_5end |
EntrezGene: | ENO1 |
HGNC: | 3350 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.97e-13 | 250 |
mesodermal cell | 4.04e-10 | 121 |
epithelial cell | 1.97e-09 | 253 |
electrically responsive cell | 2.13e-07 | 61 |
electrically active cell | 2.13e-07 | 61 |
muscle precursor cell | 6.08e-07 | 58 |
myoblast | 6.08e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.08e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 6.48e-10 | 148 |
epithelial tube | 9.68e-10 | 117 |
artery | 2.62e-09 | 42 |
arterial blood vessel | 2.62e-09 | 42 |
arterial system | 2.62e-09 | 42 |
epithelial vesicle | 4.86e-09 | 78 |
epithelial tube open at both ends | 5.87e-08 | 59 |
blood vessel | 5.87e-08 | 59 |
blood vasculature | 5.87e-08 | 59 |
vascular cord | 5.87e-08 | 59 |
dense mesenchyme tissue | 1.05e-07 | 73 |
somite | 1.05e-07 | 71 |
presomitic mesoderm | 1.05e-07 | 71 |
presumptive segmental plate | 1.05e-07 | 71 |
dermomyotome | 1.05e-07 | 71 |
trunk paraxial mesoderm | 1.05e-07 | 71 |
paraxial mesoderm | 1.12e-07 | 72 |
presumptive paraxial mesoderm | 1.12e-07 | 72 |
splanchnic layer of lateral plate mesoderm | 1.17e-07 | 83 |
trunk mesenchyme | 2.29e-07 | 122 |
multilaminar epithelium | 8.87e-07 | 83 |