FFCP PHASE1:Hg19::chr3:113344781..113344796,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:113344781..113344796,+
|short_description=p3@SIDT1
|description=CAGE_peak_3_at_SIDT1_5end
|association_with_transcript=20bp_to_ENST00000498152_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54847 | |EntrezGene=54847 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25967 | |HGNC=25967 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_ENST00000498152_5end | |||
|cluster_id=chr3:113344781..113344796,+ | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_3_at_SIDT1_5end | |||
|id=chr3:113344781..113344796,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.06e-37!172;CL:0000566!2.06e-37!172;CL:0000738!2.27e-35!140;CL:0000988!8.74e-34!182;CL:0002032!2.99e-32!165;CL:0000837!2.99e-32!165;CL:0000557!3.86e-31!71;CL:0002087!1.22e-29!119;CL:0002031!6.06e-29!124;CL:0000763!7.86e-29!112;CL:0000049!7.86e-29!112;CL:0000839!1.79e-28!70;CL:0000766!3.34e-28!76;CL:0002057!6.94e-27!42;CL:0002009!1.48e-26!65;CL:0002194!2.75e-26!63;CL:0000576!2.75e-26!63;CL:0000040!2.75e-26!63;CL:0000559!2.75e-26!63;CL:0000860!2.65e-24!45;CL:0000236!5.76e-12!14;CL:0002393!3.90e-08!9;CL:0002397!3.90e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.64e-28;13!CL:0000945;1.90e-14;24!CL:0000784;5.97e-13;3!CL:0002619;1.84e-11;3!CL:0000766;1.33e-10;69!CL:0000473;1.64e-09;39!CL:0000234;1.64e-09;39!CL:0000576;1.88e-09;48!CL:0000860;4.55e-08;33!CL:0002057;4.55e-08;33!CL:0000097;1.54e-07;5!CL:0000738;1.60e-07;136!CL:0000763;2.84e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.47e-29,168;CL:0000988,3.29e-27,177;CL:0000738,1.18e-26,136;CL:0000236,2.54e-26,14;CL:0002032,6.17e-24,161;CL:0000837,6.17e-24,161;CL:0002031,9.19e-22,120;CL:0000766,1.74e-20,72;CL:0000557,3.41e-20,67;CL:0002087,1.77e-19,115;CL:0000763,5.62e-19,108;CL:0000049,5.62e-19,108;CL:0000839,1.69e-18,66;CL:0002194,7.44e-15,59;CL:0000576,7.44e-15,59;CL:0000040,7.44e-15,59;CL:0000559,7.44e-15,59;CL:0000945,1.89e-14,24;CL:0000826,1.89e-14,24;CL:0002009,3.08e-14,61;CL:0000784,5.99e-13,3;CL:0002619,1.62e-11,3;CL:0000473,3.30e-11,48;CL:0000234,3.30e-11,48;CL:0000860,2.06e-09,42;CL:0002057,2.06e-09,42;CL:0000134,8.65e-09,354;CL:0002320,1.95e-08,361;CL:0000097,1.37e-07,5;CL:0002028,1.37e-07,5;CL:0000219,3.35e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.89e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.79e-23,98;UBERON:0003061,2.79e-23,98;UBERON:0002193,3.60e-22,108;UBERON:0002405,2.34e-19,93;UBERON:0002371,4.54e-19,76;UBERON:0001474,2.81e-17,82;UBERON:0004765,2.93e-15,90;UBERON:0001434,3.39e-13,100;UBERON:0003081,2.50e-09,203;UBERON:0002384,5.88e-08,371;UBERON:0002204,2.75e-07,167 | |||
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| ||
|short_description=p3@SIDT1 | |||
}} | }} |
Latest revision as of 15:55, 19 September 2015
Short description: | p3@SIDT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SIDT1_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 20bp_to_ENST00000498152_5end |
EntrezGene: | SIDT1 |
HGNC: | 25967 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.79e-23 | 98 |
blood island | 2.79e-23 | 98 |
hemolymphoid system | 3.60e-22 | 108 |
immune system | 2.34e-19 | 93 |
bone marrow | 4.54e-19 | 76 |
bone element | 2.81e-17 | 82 |
skeletal element | 2.93e-15 | 90 |
skeletal system | 3.39e-13 | 100 |
lateral plate mesoderm | 2.50e-09 | 203 |
connective tissue | 5.88e-08 | 371 |
musculoskeletal system | 2.75e-07 | 167 |