FFCP PHASE1:Hg19::chr1:8926369..8926385,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:8926369..8926385,-
|short_description=p12@ENO1
|description=CAGE_peak_12_at_ENO1_5end
|association_with_transcript=109bp_to_BC021166_5end
|EntrezGene=2023...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2023 | |EntrezGene=2023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3350 | |HGNC=3350 | ||
|TSSclassifier=strong | |||
|UniProt=P06733 | |UniProt=P06733 | ||
|association_with_transcript=109bp_to_BC021166_5end | |||
|cluster_id=chr1:8926369..8926385,- | |||
|description=CAGE_peak_12_at_ENO1_5end | |||
|id=chr1:8926369..8926385,- | |||
|ontology_enrichment_celltype=CL:0000548!3.57e-18!679;CL:0000004!3.57e-18!679;CL:0000255!3.57e-18!679;CL:0000012!9.80e-18!682;CL:0000003!2.89e-16!722;CL:0000144!1.37e-11!625;CL:0000055!9.22e-11!180;CL:0002371!3.46e-10!591;CL:0002321!5.49e-08!248;CL:0000220!6.31e-08!246;CL:0000393!3.00e-07!60;CL:0000211!3.00e-07!60;CL:0000359!5.45e-07!32;CL:0000183!6.10e-07!59;CL:0000680!6.27e-07!57;CL:0000056!6.27e-07!57;CL:0000355!6.27e-07!57;CL:0000222!6.97e-07!119;CL:0000063!7.10e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.96e-09;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.95e-09,32;CL:0000393,2.42e-09,61;CL:0000211,2.42e-09,61;CL:0000680,6.06e-09,58;CL:0000056,6.06e-09,58;CL:0000355,6.06e-09,58;CL:0000187,1.91e-08,55;CL:0000222,1.93e-08,121;CL:0002321,2.59e-07,250;CL:0000192,4.22e-07,43;CL:0000514,4.22e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!2.27e-09!42;UBERON:0003509!2.27e-09!42;UBERON:0004572!2.27e-09!42;UBERON:0004573!2.16e-07!33;UBERON:0004571!2.16e-07!33;UBERON:0001737!6.24e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.07e-10;9!UBERON:0001557;1.07e-10;9!UBERON:0001637;1.33e-08;42!UBERON:0003509;1.33e-08;42!UBERON:0004572;1.33e-08;42!UBERON:0004573;6.47e-08;33!UBERON:0004571;6.47e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.26e-11,42;UBERON:0003509,2.26e-11,42;UBERON:0004572,2.26e-11,42;UBERON:0007503,4.12e-11,78;UBERON:0001737,4.27e-11,9;UBERON:0002329,4.76e-09,71;UBERON:0003059,4.76e-09,71;UBERON:0007282,4.76e-09,71;UBERON:0004290,4.76e-09,71;UBERON:0009618,4.76e-09,71;UBERON:0003077,8.68e-09,72;UBERON:0007285,8.68e-09,72;UBERON:0007524,1.55e-08,73;UBERON:0004573,2.23e-08,33;UBERON:0004571,2.23e-08,33;UBERON:0001134,7.94e-08,62;UBERON:0002036,7.94e-08,62;UBERON:0003082,7.94e-08,62;UBERON:0004872,9.53e-08,83;UBERON:0000486,1.23e-07,83;UBERON:0002385,2.50e-07,64;UBERON:0001015,2.50e-07,64;UBERON:0000383,2.50e-07,64;UBERON:0003914,3.46e-07,117 | |||
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|phase1_expression=0.908391896352783,3.42560838225573,0.140954404095971,0,0.893922188854576,8.72338524100369,0,0,0.261185628199839,0.737201809504527,9.76921635161399,0,0,1.23766352960047,1.65698687863958,2.6893005858071,2.41077811209591,2.92124036154949,2.92759679274304,0.492484232307152,2.44800829493104,0.940364164434263,0.286235987131057,1.50561867580173,0.87879847716362,0.840547463227464,0.492603536699674,0.708397031823113,0.393364276848904,0,0,8.27479102031034,2.409647350226,2.58827807116751,0.154934401160603,0.142169232487422,0.880801318004542,0.553995408531877,0.200544447470142,0,0,0,0,0.436194716338694,0,0,0.464858073811369,0.822335776043652,1.23882548358041,0.575384784644301,0.512321413058201,0.47296445977717,0.689491361473237,0,0,1.12945403725563,0.272906150057846,0,1.22433556948361,0,0.639337125799041,0.989553900560148,0.199463657621632,0.426224750532694,0.580418477257168,0,0,0,0,0.65156653411535,0,0,0.316462387440884,0.211255286311942,1.06302149982522,0.628975936525128,0.673971786878971,0.300353785683013,0.16072558669708,0.285012743741249,0.59675003159727,0.547992461293902,0,0,0,0.426730222566507,0,0.574752439954483,0,0.954053754535364,0,0,0,0,0,0.526768169550154,0,0,0.411202997999018,0.334372990781356,0.32592226663359,0.473447805734733,1.94826728407911,0.222820913770347,0,0.443067789167242,0.270803863765016,1.0247305578054,1.69077151827842,0.657751618414705,1.38175008892924,0,0.444859689486181,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0,0.821127996921047,0,0.267440195783507,0.144824403882799,0,0,1.15076305659177,0.722878304769133,0,1.88300474649071,1.5905718941022,1.45990461090791,0.472674085820339,0.886917589850256,0.351339142772504,0,0.364295288292542,1.48313777113772,0.649094787309367,1.21890816109487,1.59549552622638,0,0,0,0.596287222100115,0.860234595106124,1.04142150482278,0.56530794192401,2.93649605346934,4.12677062910101,0.835979866147242,0.258416759169329,0,0,0.805658634218294,0,0.488124115096339,1.10298924103761,2.43042584364528,0.357198913136319,0.22452937262617,0.225222960966644,0,0.949265659568129,1.28241220751285,0,0,0,0.496971951695318,0.633152558322899,0.264818361626438,1.14734648299525,0.709336764396714,2.24271040056923,2.1349799145941,2.22000793575444,0,1.48181739276657,1.79808093424805,0.151357427644931,0.576175924479999,0.234321431833797,0.624320153660641,0,0.747243402759005,1.17434498643765,1.29498355494505,1.96631129383148,0,2.7023549808589,0.103325781175765,0,0.741800787835671,0,0.718618141816238,0.841680569770331,0.750711119231785,0,0.438977620880838,0.612975591598039,0.300476117813194,2.1552114800404,2.15267562826634,0.85422955527427,0,0.900273288253207,0.309157587715317,2.06112432036503,0.558350568994769,0,1.07180705677318,2.52433774244115,0,0.484938170456436,0.355009592516614,0.806016785821122,0.508681776931463,0.193260853163297,0.272746120590835,0.860413786167011,0.731842236777572,0.265059536642971,2.44007280025989,1.45125477021519,1.7662459561294,0.72995471815166,0,1.28648187638577,2.76269842704961,0.464367928031979,0.721879481669586,2.83936320095625,3.37169380156203,2.41011029883482,4.19117096383097,2.39667388501647,3.32178866755535,2.83145747136345,4.12065076763227,1.92373578473195,0,0,0,1.47008711385542,0,0,0,0.882926198829301,0.122988438543114,0.857839051492628,0.439001141634502,0,1.10581869652794,0.555530670951178,0.325808305310325,1.03993478527958,0,0.463721619900307,0,0.433099343283221,1.38895653772983,0.761016608938393,3.95102198979638,3.43394464837949,0.492434012174795,0,0.594524649154913,0.93733833986777,0.16798212819886,0.567100388969546,0.179117045405697,1.16253575405585,1.53353071666084,0,0,0,0.288239906833923,0,0.063497894292169,1.14596527667483,0,3.4214489204541,1.13110241973656,0.300343057843917,0.285826432630578,0.112131084345361,0.87192013766656,0.22001485746285,0.517086863031111,0,1.690605505112,0,0,0.771622122786426,1.41849132023278,1.0656887160644,0.142977993658148,0,1.64648067356154,0.977208552881205,1.42156779497018,3.16780749173372,0.602878754119172,0,0.499864955910285,1.2162378064119,1.00451418286425,2.10833939483032,0.718874566474748,0,0,1.01346914667305,1.43833425785268,0.179060963239896,1.00876629594175,0,0,0.256686072559497,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0.36807447515742,2.00068208423871,2.71265023699736,1.24782516918484,1.96271887676878,0.473107245101804,0.35142424497814,0,0,2.0694614258501,0,1.10621501125022,0.60818530127658,0.195801157462741,1.37257369524342,0,0.647142602455851,0.106727557803444,0.303127571446259,0,1.5119514666484,0,0.767309866440312,2.24528075546459,0,0,0.160853921143607,1.48418066444991,2.7757744884478,1.06537035187876,0.0821271560138091,1.55776328755086,3.48631135379878,0.483437798366489,3.40860999515584,0.0920809889358963,0.68888668898764,1.0925470080403,0.786746489756545,0,0.693138033939733,0,0,0.527758144464379,2.27466768141793,1.36074964221213,1.0795795805107,0,0,2.50844886927427,0,2.49322802678617,1.34324852833307,0,0,1.28225062558195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| ||
|short_description=p12@ENO1 | |||
}} | }} |
Latest revision as of 15:53, 19 September 2015
Short description: | p12@ENO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ENO1_5end |
Coexpression cluster: | NA |
Association with transcript: | 109bp_to_BC021166_5end |
EntrezGene: | ENO1 |
HGNC: | 3350 |
UniProt: | P06733 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.95e-09 | 32 |
electrically responsive cell | 2.42e-09 | 61 |
electrically active cell | 2.42e-09 | 61 |
muscle precursor cell | 6.06e-09 | 58 |
myoblast | 6.06e-09 | 58 |
multi-potent skeletal muscle stem cell | 6.06e-09 | 58 |
muscle cell | 1.91e-08 | 55 |
mesodermal cell | 1.93e-08 | 121 |
embryonic cell | 2.59e-07 | 250 |
smooth muscle cell | 4.22e-07 | 43 |
smooth muscle myoblast | 4.22e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
artery | 2.26e-11 | 42 |
arterial blood vessel | 2.26e-11 | 42 |
arterial system | 2.26e-11 | 42 |
epithelial vesicle | 4.12e-11 | 78 |
larynx | 4.27e-11 | 9 |
somite | 4.76e-09 | 71 |
presomitic mesoderm | 4.76e-09 | 71 |
presumptive segmental plate | 4.76e-09 | 71 |
dermomyotome | 4.76e-09 | 71 |
trunk paraxial mesoderm | 4.76e-09 | 71 |
paraxial mesoderm | 8.68e-09 | 72 |
presumptive paraxial mesoderm | 8.68e-09 | 72 |
dense mesenchyme tissue | 1.55e-08 | 73 |
systemic artery | 2.23e-08 | 33 |
systemic arterial system | 2.23e-08 | 33 |
skeletal muscle tissue | 7.94e-08 | 62 |
striated muscle tissue | 7.94e-08 | 62 |
myotome | 7.94e-08 | 62 |
splanchnic layer of lateral plate mesoderm | 9.53e-08 | 83 |
multilaminar epithelium | 1.23e-07 | 83 |
muscle tissue | 2.50e-07 | 64 |
musculature | 2.50e-07 | 64 |
musculature of body | 2.50e-07 | 64 |
epithelial tube | 3.46e-07 | 117 |