FFCP PHASE1:Hg19::chr15:89402148..89402159,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=176 | |EntrezGene=176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=319 | |HGNC=319 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-147bp_to_ENST00000560601_5end | |association_with_transcript=-147bp_to_ENST00000560601_5end | ||
|cluster_id=chr15:89402148..89402159,+ | |||
|coexpression_cluster_id=C243 | |coexpression_cluster_id=C243 | ||
|description=CAGE_peak_6_at_ACAN_5end | |description=CAGE_peak_6_at_ACAN_5end | ||
|id=chr15:89402148..89402159,+ | |id=chr15:89402148..89402159,+ | ||
|ontology_enrichment_celltype=CL:0000153;2.81e-98;9!CL:0000447;2.81e-98;9!CL:0000138;4.33e-66;6!CL:0000327;3.54e-59;15!CL:0000214;7.69e-34;3!CL:0000499;6.90e-32;28!CL:0000151;2.98e-19;36!CL:0002615;1.53e-09;3 | |ontology_enrichment_celltype=CL:0000153!1.98e-23!9;CL:0000447!1.98e-23!9;CL:0002620!3.46e-18!23;CL:0000667!3.53e-16!6;CL:0000058!3.53e-16!6;CL:0000138!3.53e-16!6;CL:0000327!7.49e-15!14;CL:0000057!1.26e-13!75;CL:0000499!9.20e-13!27;CL:0000055!2.99e-10!180;CL:0000214!5.94e-09!3;CL:0000135!1.60e-08!3;CL:0000386!1.60e-08!3;CL:0000388!1.60e-08!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000153;2.81e-98;9!CL:0000447;2.81e-98;9!CL:0000138;4.33e-66;6!CL:0000327;3.54e-59;15!CL:0000214;7.69e-34;3!CL:0000499;6.90e-32;28!CL:0000151;2.98e-19;36!CL:0002615;1.53e-09;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000153,2.38e-98,9;CL:0000447,2.38e-98,9;CL:0000058,5.13e-66,6;CL:0000138,5.13e-66,6;CL:0000327,3.20e-59,15;CL:0000214,5.51e-34,3;CL:0000499,6.54e-32,28;CL:0000151,6.90e-25,36;CL:0002615,1.81e-09,3 | ||
|ontology_enrichment_uberon=UBERON:0006915;7.69e-34;3!UBERON:0007616;7.69e-34;3!UBERON:0002217;7.69e-34;3!UBERON:0002018;7.69e-34;3!UBERON:0004457;2.47e-25;9!UBERON:0000042;2.47e-25;9!UBERON:0004905;2.20e-13;8!UBERON:0000982;2.20e-13;8!UBERON:0004770;2.20e-13;8!UBERON:0000486;3.01e-09;12 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:4235!6.38e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!7.99e-10!40;UBERON:0006915!5.94e-09!3;UBERON:0002018!5.94e-09!3;UBERON:0002217!5.94e-09!3;UBERON:0007616!5.94e-09!3;UBERON:0002199!1.44e-08!45;UBERON:0002416!1.44e-08!45;UBERON:0000043!1.60e-08!3;UBERON:0004457!5.16e-08!12;UBERON:0000042!5.16e-08!12;UBERON:0002079!3.57e-07!1;UBERON:0002135!7.57e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;7.69e-34;3!UBERON:0007616;7.69e-34;3!UBERON:0002217;7.69e-34;3!UBERON:0002018;7.69e-34;3!UBERON:0004457;2.47e-25;9!UBERON:0000042;2.47e-25;9!UBERON:0004905;2.20e-13;8!UBERON:0000982;2.20e-13;8!UBERON:0004770;2.20e-13;8!UBERON:0000486;3.01e-09;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,5.51e-34,3;UBERON:0007616,5.51e-34,3;UBERON:0002217,5.51e-34,3;UBERON:0002018,5.51e-34,3;UBERON:0004457,3.29e-19,12;UBERON:0000042,3.29e-19,12;UBERON:0004905,1.94e-13,8;UBERON:0000982,1.94e-13,8;UBERON:0004770,1.94e-13,8 | |||
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|short_description=p6@ACAN | |short_description=p6@ACAN | ||
}} | }} |
Latest revision as of 15:46, 19 September 2015
Short description: | p6@ACAN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ACAN_5end |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | -147bp_to_ENST00000560601_5end |
EntrezGene: | ACAN |
HGNC: | 319 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.38e-98 | 9 |
carbohydrate secreting cell | 2.38e-98 | 9 |
chondroblast | 5.13e-66 | 6 |
chondrocyte | 5.13e-66 | 6 |
extracellular matrix secreting cell | 3.20e-59 | 15 |
synovial cell | 5.51e-34 | 3 |
stromal cell | 6.54e-32 | 28 |
secretory cell | 6.90e-25 | 36 |
adipocyte of omentum tissue | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 5.51e-34 | 3 |
layer of synovial tissue | 5.51e-34 | 3 |
synovial joint | 5.51e-34 | 3 |
synovial membrane of synovial joint | 5.51e-34 | 3 |
cavity lining | 3.29e-19 | 12 |
serous membrane | 3.29e-19 | 12 |
articulation | 1.94e-13 | 8 |
skeletal joint | 1.94e-13 | 8 |
articular system | 1.94e-13 | 8 |