FFCP PHASE1:Hg19::chr6:71377567..71377632,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60682 | |EntrezGene=60682 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19651 | |HGNC=19651 | ||
|TSSclassifier=strong | |||
|UniProt=E7ETU6 | |UniProt=E7ETU6 | ||
|association_with_transcript=0bp_to_ENST00000422334_5end | |association_with_transcript=0bp_to_ENST00000422334_5end | ||
|cluster_id=chr6:71377567..71377632,+ | |||
|description=CAGE_peak_1_at_SMAP1_5end | |description=CAGE_peak_1_at_SMAP1_5end | ||
|id=chr6:71377567..71377632,+ | |id=chr6:71377567..71377632,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.77e-30!140;CL:0000766!5.97e-27!76;CL:0002087!1.04e-24!119;CL:0002031!1.51e-24!124;CL:0002057!1.35e-23!42;CL:0000557!2.31e-23!71;CL:0000839!1.05e-22!70;CL:0002194!5.13e-22!63;CL:0000576!5.13e-22!63;CL:0000040!5.13e-22!63;CL:0000559!5.13e-22!63;CL:0002009!6.73e-22!65;CL:0000860!1.71e-19!45;CL:0000037!2.25e-18!172;CL:0000566!2.25e-18!172;CL:0002032!2.78e-18!165;CL:0000837!2.78e-18!165;CL:0000988!1.07e-15!182;CL:0000763!2.96e-14!112;CL:0000049!2.96e-14!112 | |ontology_enrichment_celltype=CL:0000738!4.77e-30!140;CL:0000766!5.97e-27!76;CL:0002087!1.04e-24!119;CL:0002031!1.51e-24!124;CL:0002057!1.35e-23!42;CL:0000557!2.31e-23!71;CL:0000839!1.05e-22!70;CL:0002194!5.13e-22!63;CL:0000576!5.13e-22!63;CL:0000040!5.13e-22!63;CL:0000559!5.13e-22!63;CL:0002009!6.73e-22!65;CL:0000860!1.71e-19!45;CL:0000037!2.25e-18!172;CL:0000566!2.25e-18!172;CL:0002032!2.78e-18!165;CL:0000837!2.78e-18!165;CL:0000988!1.07e-15!182;CL:0000763!2.96e-14!112;CL:0000049!2.96e-14!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.51e-17;33!CL:0002057;2.51e-17;33!CL:0000473;2.18e-16;39!CL:0000234;2.18e-16;39!CL:0000576;1.47e-15;48!CL:0000766;1.74e-13;69!CL:0002087;1.70e-08;104!CL:0000738;1.40e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.05e-32,136;CL:0000766,2.44e-30,72;CL:0002087,5.00e-27,115;CL:0002031,8.64e-27,120;CL:0000557,1.40e-26,67;CL:0000839,6.90e-26,66;CL:0000473,1.48e-25,48;CL:0000234,1.48e-25,48;CL:0002194,2.19e-25,59;CL:0000576,2.19e-25,59;CL:0000040,2.19e-25,59;CL:0000559,2.19e-25,59;CL:0002009,3.55e-25,61;CL:0000860,1.35e-23,42;CL:0002057,1.35e-23,42;CL:0000037,7.12e-20,168;CL:0002032,8.13e-20,161;CL:0000837,8.13e-20,161;CL:0000988,1.42e-17,177;CL:0000763,6.50e-16,108;CL:0000049,6.50e-16,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.78e-17;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.90e-19!102;UBERON:0003061!2.90e-19!102;UBERON:0002371!2.63e-18!80;UBERON:0004765!6.86e-18!101;UBERON:0001434!6.86e-18!101;UBERON:0001474!7.18e-18!86;UBERON:0002193!1.04e-15!112;UBERON:0002405!2.18e-11!115;UBERON:0007023!7.15e-09!115;UBERON:0002204!3.44e-08!167 | |ontology_enrichment_uberon=UBERON:0002390!2.90e-19!102;UBERON:0003061!2.90e-19!102;UBERON:0002371!2.63e-18!80;UBERON:0004765!6.86e-18!101;UBERON:0001434!6.86e-18!101;UBERON:0001474!7.18e-18!86;UBERON:0002193!1.04e-15!112;UBERON:0002405!2.18e-11!115;UBERON:0007023!7.15e-09!115;UBERON:0002204!3.44e-08!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.96e-21,98;UBERON:0003061,1.96e-21,98;UBERON:0002371,8.74e-21,76;UBERON:0001474,3.47e-20,82;UBERON:0001434,1.69e-19,100;UBERON:0004765,2.86e-19,90;UBERON:0002405,1.23e-17,93;UBERON:0002193,1.75e-17,108;UBERON:0002204,8.87e-09,167;UBERON:0007023,1.26e-08,114 | |||
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| ||
|short_description=p1@SMAP1 | |short_description=p1@SMAP1 | ||
}} | }} |
Latest revision as of 15:42, 19 September 2015
Short description: | p1@SMAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SMAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000422334_5end |
EntrezGene: | SMAP1 |
HGNC: | 19651 |
UniProt: | E7ETU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.05e-32 | 136 |
myeloid leukocyte | 2.44e-30 | 72 |
nongranular leukocyte | 5.00e-27 | 115 |
hematopoietic lineage restricted progenitor cell | 8.64e-27 | 120 |
granulocyte monocyte progenitor cell | 1.40e-26 | 67 |
myeloid lineage restricted progenitor cell | 6.90e-26 | 66 |
defensive cell | 1.48e-25 | 48 |
phagocyte | 1.48e-25 | 48 |
monopoietic cell | 2.19e-25 | 59 |
monocyte | 2.19e-25 | 59 |
monoblast | 2.19e-25 | 59 |
promonocyte | 2.19e-25 | 59 |
macrophage dendritic cell progenitor | 3.55e-25 | 61 |
classical monocyte | 1.35e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.35e-23 | 42 |
hematopoietic stem cell | 7.12e-20 | 168 |
hematopoietic oligopotent progenitor cell | 8.13e-20 | 161 |
hematopoietic multipotent progenitor cell | 8.13e-20 | 161 |
hematopoietic cell | 1.42e-17 | 177 |
myeloid cell | 6.50e-16 | 108 |
common myeloid progenitor | 6.50e-16 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.96e-21 | 98 |
blood island | 1.96e-21 | 98 |
bone marrow | 8.74e-21 | 76 |
bone element | 3.47e-20 | 82 |
skeletal system | 1.69e-19 | 100 |
skeletal element | 2.86e-19 | 90 |
immune system | 1.23e-17 | 93 |
hemolymphoid system | 1.75e-17 | 108 |
musculoskeletal system | 8.87e-09 | 167 |
adult organism | 1.26e-08 | 114 |