FFCP PHASE1:Hg19::chr1:8877735..8877760,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:8877735..8877760,- to FFCP PHASE1:Hg19::chr1:8877735..8877760,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=473 | |EntrezGene=473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9965 | |HGNC=9965 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P2R6 | |UniProt=Q9P2R6 | ||
|association_with_transcript=-33bp_to_ENST00000400908_5end | |||
|cluster_id=chr1:8877735..8877760,- | |||
|description=CAGE_peak_8_at_RERE_5end | |||
|id=chr1:8877735..8877760,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!2.68e-07!22;DOID:2994!2.68e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.27e-07;22!DOID:2994;3.27e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.37e-07,22;DOID:2994,1.37e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.05e-21!57;UBERON:0005068!3.05e-21!57;UBERON:0006241!3.05e-21!57;UBERON:0007135!3.05e-21!57;UBERON:0002346!3.60e-21!90;UBERON:0003075!1.18e-19!86;UBERON:0007284!1.18e-19!86;UBERON:0000073!4.36e-19!94;UBERON:0001016!4.36e-19!94;UBERON:0005743!1.68e-18!86;UBERON:0001017!1.82e-18!82;UBERON:0002616!8.22e-18!59;UBERON:0000955!1.13e-16!69;UBERON:0006238!1.13e-16!69;UBERON:0007023!1.77e-16!115;UBERON:0003080!2.21e-15!42;UBERON:0002780!4.10e-15!41;UBERON:0001890!4.10e-15!41;UBERON:0006240!4.10e-15!41;UBERON:0000924!6.63e-15!173;UBERON:0006601!6.63e-15!173;UBERON:0003056!1.13e-14!61;UBERON:0004121!1.02e-13!169;UBERON:0002020!7.76e-13!34;UBERON:0003528!7.76e-13!34;UBERON:0001893!8.72e-13!34;UBERON:0000153!1.77e-12!129;UBERON:0007811!1.77e-12!129;UBERON:0002791!2.01e-12!33;UBERON:0000033!4.49e-12!123;UBERON:0001869!6.93e-12!32;UBERON:0000025!2.31e-10!194;UBERON:0004111!6.28e-10!241;UBERON:0000956!3.11e-09!25;UBERON:0000203!3.11e-09!25;UBERON:0002619!4.97e-09!22;UBERON:0000483!1.80e-08!309;UBERON:0000477!1.88e-08!286;UBERON:0000119!3.38e-08!312;UBERON:0001950!4.49e-08!20;UBERON:0000064!6.89e-08!219;UBERON:0000481!1.78e-07!347;UBERON:0003076!3.98e-07!15;UBERON:0003057!3.98e-07!15;UBERON:0000475!4.36e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;3.81e-11;49!UBERON:0002780;5.99e-11;41!UBERON:0001890;5.99e-11;41!UBERON:0000073;8.61e-11;53!UBERON:0002616;8.61e-11;53!UBERON:0001893;2.05e-10;34!UBERON:0002791;2.10e-10;32!UBERON:0003528;2.78e-10;34!UBERON:0002020;2.78e-10;34!UBERON:0001869;2.80e-10;32!UBERON:0000956;1.07e-08;25!UBERON:0000203;1.07e-08;25!UBERON:0002619;1.63e-08;22!UBERON:0001016;7.09e-08;83!UBERON:0001950;1.48e-07;20!UBERON:0000955;1.60e-07;68!UBERON:0001017;7.53e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.22e-21,86;UBERON:0001049,4.68e-21,56;UBERON:0005068,4.68e-21,56;UBERON:0006241,4.68e-21,56;UBERON:0007135,4.68e-21,56;UBERON:0003075,4.52e-20,82;UBERON:0007284,4.52e-20,82;UBERON:0000073,1.38e-19,53;UBERON:0002616,1.38e-19,53;UBERON:0001016,1.13e-18,89;UBERON:0001017,5.43e-18,81;UBERON:0007023,7.48e-17,114;UBERON:0000955,3.93e-16,68;UBERON:0006238,3.93e-16,68;UBERON:0002780,4.86e-15,41;UBERON:0001890,4.86e-15,41;UBERON:0003080,4.86e-15,41;UBERON:0006240,4.86e-15,41;UBERON:0010371,1.12e-14,104;UBERON:0003056,1.14e-14,61;UBERON:0004121,6.60e-14,171;UBERON:0000924,6.60e-14,171;UBERON:0006601,6.60e-14,171;UBERON:0003528,5.88e-13,34;UBERON:0002020,5.88e-13,34;UBERON:0001893,6.62e-13,34;UBERON:0010314,4.15e-12,132;UBERON:0002791,5.04e-12,32;UBERON:0001869,5.58e-12,32;UBERON:0011216,6.04e-12,223;UBERON:0000025,2.35e-10,192;UBERON:0004111,1.02e-09,240;UBERON:0000956,2.99e-09,25;UBERON:0000203,2.99e-09,25;UBERON:0002619,4.96e-09,22;UBERON:0001950,4.74e-08,20;UBERON:0000483,9.21e-08,306;UBERON:0000119,1.71e-07,309;UBERON:0003076,2.65e-07,15;UBERON:0003057,2.65e-07,15 | |||
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| ||
|short_description=p8@RERE | |||
}} | }} |
Latest revision as of 15:39, 19 September 2015
Short description: | p8@RERE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RERE_5end |
Coexpression cluster: | NA |
Association with transcript: | -33bp_to_ENST00000400908_5end |
EntrezGene: | RERE |
HGNC: | 9965 |
UniProt: | Q9P2R6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.37e-07 | 22 |
germ cell cancer | 1.37e-07 | 22 |