FFCP PHASE1:Hg19::chr12:57984965..57985059,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:57984965..57985059,+
|short_description=p1@PIP4K2C
|description=CAGE_peak_1_at_PIP4K2C_5end
|association_with_transcript=0bp_to_ENST00000354947,ENST000004...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79837 | |EntrezGene=79837 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23786 | |HGNC=23786 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TBX8,B3KQV3,F8VU68,F8VVB2,B4DY44,F8VNT5 | |UniProt=Q8TBX8,B3KQV3,F8VU68,F8VVB2,B4DY44,F8VNT5 | ||
|association_with_transcript=0bp_to_ENST00000354947,ENST00000436866,ENST00000540759,ENST00000550095,ENST00000550360,ENST00000550465,ENST00000551772_5end | |||
|cluster_id=chr12:57984965..57985059,+ | |||
|description=CAGE_peak_1_at_PIP4K2C_5end | |||
|id=chr12:57984965..57985059,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.95e-25!254;CL:0002076!5.14e-12!43;CL:0000223!1.95e-09!59;CL:0002077!9.27e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.15e-10;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.22e-25,253;CL:0002076,9.14e-13,42;CL:0000223,6.01e-10,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.11e-15!106;DOID:0050687!1.30e-14!143;DOID:14566!3.77e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.11e-15,106;DOID:0050687,1.30e-14,143;DOID:14566,3.75e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004121!5.25e-16!169;UBERON:0000924!5.57e-16!173;UBERON:0006601!5.57e-16!173;UBERON:0007023!1.32e-14!115;UBERON:0000064!3.18e-14!219;UBERON:0000033!6.48e-14!123;UBERON:0000153!5.48e-13!129;UBERON:0007811!5.48e-13!129;UBERON:0001049!1.43e-12!57;UBERON:0005068!1.43e-12!57;UBERON:0006241!1.43e-12!57;UBERON:0007135!1.43e-12!57;UBERON:0000955!2.44e-12!69;UBERON:0006238!2.44e-12!69;UBERON:0003075!5.37e-12!86;UBERON:0007284!5.37e-12!86;UBERON:0002616!5.94e-12!59;UBERON:0002346!7.72e-12!90;UBERON:0005743!1.22e-11!86;UBERON:0001017!1.22e-11!82;UBERON:0004119!1.28e-11!169;UBERON:0000925!1.28e-11!169;UBERON:0006595!1.28e-11!169;UBERON:0003080!1.42e-11!42;UBERON:0003056!1.58e-11!61;UBERON:0002780!1.85e-11!41;UBERON:0001890!1.85e-11!41;UBERON:0006240!1.85e-11!41;UBERON:0000073!1.86e-11!94;UBERON:0001016!1.86e-11!94;UBERON:0000464!4.67e-10!104;UBERON:0000481!6.39e-10!347;UBERON:0000062!1.21e-09!511;UBERON:0001893!2.79e-09!34;UBERON:0001004!2.99e-09!72;UBERON:0002619!7.52e-09!22;UBERON:0001869!8.78e-09!32;UBERON:0002791!8.95e-09!33;UBERON:0000466!1.11e-08!126;UBERON:0002020!1.95e-08!34;UBERON:0003528!1.95e-08!34;UBERON:0000475!2.23e-08!365;UBERON:0001950!2.32e-08!20;UBERON:0008947!2.37e-08!38;UBERON:0003258!2.37e-08!38;UBERON:0004921!2.63e-08!129;UBERON:0004185!2.63e-08!129;UBERON:0000077!5.24e-08!130;UBERON:0000065!5.90e-08!53;UBERON:0001007!7.29e-08!155;UBERON:0001555!7.29e-08!155;UBERON:0007026!7.29e-08!155;UBERON:0001041!1.78e-07!98;UBERON:0005178!2.26e-07!34;UBERON:0002224!2.26e-07!34;UBERON:0005157!3.01e-07!51;UBERON:0005153!3.79e-07!37;UBERON:0000063!5.35e-07!97;UBERON:0000956!6.27e-07!25;UBERON:0000203!6.27e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.43e-09;22!UBERON:0001950;2.67e-08;20!UBERON:0002780;2.90e-08;41!UBERON:0001890;2.90e-08;41!UBERON:0004807;3.20e-08;22!UBERON:0001893;4.04e-08;34!UBERON:0001869;6.06e-08;32!UBERON:0002791;1.15e-07;32!UBERON:0000073;2.70e-07;53!UBERON:0002616;2.70e-07;53!UBERON:0003528;2.98e-07;34!UBERON:0002020;2.98e-07;34!UBERON:0005911;5.84e-07;36!UBERON:0000956;7.33e-07;25!UBERON:0000203;7.33e-07;25!UBERON:0000072;7.61e-07;37!UBERON:0000065;7.95e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,3.43e-17,223;UBERON:0004121,1.01e-14,171;UBERON:0000924,1.01e-14,171;UBERON:0006601,1.01e-14,171;UBERON:0010371,2.72e-14,104;UBERON:0007023,3.26e-14,114;UBERON:0000073,1.64e-12,53;UBERON:0002616,1.64e-12,53;UBERON:0001049,1.92e-12,56;UBERON:0005068,1.92e-12,56;UBERON:0006241,1.92e-12,56;UBERON:0007135,1.92e-12,56;UBERON:0000955,3.34e-12,68;UBERON:0006238,3.34e-12,68;UBERON:0003056,1.19e-11,61;UBERON:0001017,1.69e-11,81;UBERON:0002780,1.85e-11,41;UBERON:0001890,1.85e-11,41;UBERON:0003080,1.85e-11,41;UBERON:0006240,1.85e-11,41;UBERON:0001016,2.75e-11,89;UBERON:0003075,5.96e-11,82;UBERON:0007284,5.96e-11,82;UBERON:0002346,8.31e-11,86;UBERON:0004119,3.19e-10,160;UBERON:0000925,3.19e-10,160;UBERON:0006595,3.19e-10,160;UBERON:0001893,2.79e-09,34;UBERON:0002619,7.52e-09,22;UBERON:0001869,8.78e-09,32;UBERON:0002791,1.57e-08,32;UBERON:0001004,1.61e-08,74;UBERON:0003528,1.95e-08,34;UBERON:0002020,1.95e-08,34;UBERON:0001950,2.32e-08,20;UBERON:0008947,2.37e-08,38;UBERON:0003258,2.37e-08,38;UBERON:0004921,1.62e-07,118;UBERON:0005177,1.97e-07,101;UBERON:0000065,2.08e-07,54;UBERON:0005178,2.93e-07,34;UBERON:0002224,2.93e-07,34;UBERON:0005153,3.79e-07,37;UBERON:0001007,5.73e-07,145;UBERON:0001555,5.73e-07,145;UBERON:0007026,5.73e-07,145;UBERON:0000956,6.27e-07,25;UBERON:0000203,6.27e-07,25 | |||
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| ||
|short_description=p1@PIP4K2C | |||
}} | }} |
Latest revision as of 15:28, 19 September 2015
Short description: | p1@PIP4K2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PIP4K2C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000354947, ENST00000436866, ENST00000540759, ENST00000550095, ENST00000550360, ENST00000550465, ENST00000551772_5end |
EntrezGene: | PIP4K2C |
HGNC: | 23786 |
UniProt: | Q8TBX8B3KQV3F8VU68F8VVB2B4DY44F8VNT5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.22e-25 | 253 |
endo-epithelial cell | 9.14e-13 | 42 |
endodermal cell | 6.01e-10 | 58 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.11e-15 | 106 |
cell type cancer | 1.30e-14 | 143 |
disease of cellular proliferation | 3.75e-07 | 239 |