FFCP PHASE1:Hg19::chr1:87794768..87794789,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8543 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6644 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000495705_5end | |||
|cluster_id=chr1:87794768..87794789,+ | |||
|description=CAGE_peak_10_at_LMO4_5end | |||
|id=chr1:87794768..87794789,+ | |||
|ontology_enrichment_celltype=CL:0000136!4.60e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.15e-14;13!CL:0002615;1.52e-07;3!CL:0002541;2.51e-07;3!CL:0002521;3.56e-07;3!CL:0002334;3.62e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.13e-16,15;CL:0002615,1.61e-07,3;CL:0002541,2.77e-07,3;CL:0002521,3.83e-07,3;CL:0002334,5.00e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;6.10e-09;6!UBERON:0002358;6.10e-09;6!UBERON:0003684;6.10e-09;6!UBERON:0001178;6.10e-09;6!UBERON:0004457;6.98e-08;9!UBERON:0000042;6.98e-08;9!UBERON:0003124;2.51e-07;3!UBERON:0000920;2.51e-07;3!UBERON:0002190;3.56e-07;3!UBERON:0002072;7.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.81e-09,6;UBERON:0002358,8.81e-09,6;UBERON:0003684,8.81e-09,6;UBERON:0001178,8.81e-09,6;UBERON:0000920,2.77e-07,3;UBERON:0002190,3.83e-07,3;UBERON:0002072,6.57e-07,5 | |||
|phase1_expression=1.2717486548939,1.71280419112787,3.66481450649525,3.00219895059391,3.5756887554183,2.61701557230111,5.06599756336621,4.42203911398782,1.30592814099919,0,0,0,0.263766978228454,0.37129905888014,0,0.672325146451775,0.602694528023977,0,0,0,0.204000691244253,0.313454721478088,0,0.273748850145768,0,0,0.0821005894499457,0,0,0.383829398097213,0.154816123316076,0,0.30120591877825,0.739508020333575,0.0774672005803016,0.142169232487422,0,0,0,0,0.223915474239924,0.647787332037959,0.257575567634187,1.16318591023652,0.377875943688809,0.485168122375632,0.464858073811369,1.6446715520873,1.23882548358041,0.863077176966451,0.768482119587302,0,1.03423704220986,0,0,0.376484679085209,0.818718450173537,0.224723484445085,1.53041946185451,1.28371610830437,0.639337125799041,1.31940520074686,1.59570926097305,0.852449501065388,0.290209238628584,0.56738522469114,0.622822248995575,0.251248665256743,1.0429658368404,0.217188844705117,1.21079900526674,1.47311054395026,0.949387162322653,0.633765858935825,0.850417199860174,0.209658645508376,0.22465726229299,0.300353785683013,0.16072558669708,0.285012743741249,0.19891667719909,0.730656615058536,0,0,0.889509253863555,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0.557052284425868,0,0.221533894583621,0.270803863765016,0.25618263945135,0.390178042679635,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.383587685530591,2.89151321907653,0,3.0417768981773,1.5905718941022,0,0.283604451492204,0.221729397462564,0.263504357079378,0.589405839739707,0.364295288292542,0,0.649094787309367,0.174129737299267,0.132957960518865,0.238490624305342,0,0.74291500265913,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0.81014194788176,0.17859945656816,0.22452937262617,0,0,0,0,0,3.87780264148325,0,0.496971951695318,1.2663051166458,0.132409180813219,1.14734648299525,1.41867352879343,1.12135520028461,1.06748995729705,0.49333509683432,0,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0.624320153660641,0,0.298897361103602,0.704606991862589,0.161872944368132,0,0,0.245668634623536,0.103325781175765,2.37600571456411,2.96720315134268,0,0.718618141816238,0,0,0,0.877955241761676,1.22595118319608,1.50238058906597,0,0,0,0.211931901159562,0.300091096084402,0.515262646192195,0,0.558350568994769,0,0.389748020644795,0,0.184099797284599,1.13152239773168,0,0.302256294682921,0,0.386521706326594,0.272746120590835,0,0.487894824518382,0.132529768321485,0,0.310983165046111,0.252320850875628,0,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0,0.134831308160164,0.196221465125346,0,0.738155454624648,0,0,1.47008711385542,0,0,1.18157981336281,0,0,0,0.439001141634502,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0.288732895522148,0,0.190254152234598,0,0,0.246217006087397,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0,0,0,0,0.352193736052904,4.56121854189699,2.88239906833923,3.28230326908588,0.380987365753014,0.763976851116555,0,1.71072446022705,0.102827492703324,0,0.571652865261156,0.112131084345361,0.43596006883328,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0.266422179016099,0,0,0.823240336780769,0,0,0,1.20575750823834,0,1.59956785891291,1.2162378064119,0,0,0.479249710983165,0,0,0.289562613335158,0,0,0.448340575974109,0,0,0.256686072559497,1.52456774533478,1.30139853857622,0,0.335032530668698,0.637938751653163,0,0,2.07207756718018,0,0,0,0.415941723061614,0.535286966391485,0,0.234282829985426,0.300946099727719,4.5481500811197,5.17365356462525,0,0.553107505625109,0.347534457872331,0.195801157462741,0,0.206768026122887,0.431428401637234,0.106727557803444,1.21251028578504,0,0.907170879989041,3.96972492510043,0.153461973288062,1.12264037773229,2.81906128362542,0.511707249066704,1.12597744800525,0,0.616838775210622,1.42049380250502,1.31403449622095,2.59627214591811,0.929683027679674,0.483437798366489,0.601519410909855,1.84161977871793,0.34444334449382,0.546273504020151,1.83574180943194,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0.824328093181778,0.0915694648183434,0.165018999841176,0,0,4.82051789532479,1.64340221096607,0.308097234229289,0.460511024178389,0.413509717453592,0.322260734604821,0.290033387828457,0.340906509664404,0.445160178233687,1.4875642382488,0.960950336825531,0,1.4162089319777,5.11330104227014,1.25924938732256,0,0.308033580176089,0.532306030317022,0,0,0.286249773483982,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0,0.487426979262569,0,0.682499557039929,1.97967604735198,0,1.10273068709225,0,0.438450885253763,0,0.655894752046633,0,0,0.281695602532241,0,0,0,0.709522128141196,0.844430541190656,1.64647446479951,0,0,0.0962221127255121,0,0,0.753150406214233,0,0,0,0.229723400206959,0,0.764637207142375,0.569647187174163,0,0.822724546172388,0,0,0,0,0,0,0,0,0.142283686696828,0.159426272728822,0,0,0,0,0.5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| |||
|short_description=p10@LMO4 | |||
}} |
Latest revision as of 15:22, 19 September 2015
Short description: | p10@LMO4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LMO4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000495705_5end |
EntrezGene: | LMO4 |
HGNC: | 6644 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.13e-16 | 15 |
adipocyte of omentum tissue | 1.61e-07 | 3 |
chorionic membrane mesenchymal stem cell | 2.77e-07 | 3 |
subcutaneous fat cell | 3.83e-07 | 3 |
preadipocyte | 5.00e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.81e-09 | 6 |
peritoneum | 8.81e-09 | 6 |
abdominal cavity | 8.81e-09 | 6 |
visceral peritoneum | 8.81e-09 | 6 |
egg chorion | 2.77e-07 | 3 |
subcutaneous adipose tissue | 3.83e-07 | 3 |
hypodermis | 6.57e-07 | 5 |