FFCP PHASE1:Hg19::chr18:43913919..43913967,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=494470 | |EntrezGene=494470 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31696 | |HGNC=31696 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZSG1,B3KVD1 | |UniProt=Q6ZSG1,B3KVD1 | ||
|association_with_transcript=-219bp_to_ENST00000269439,ENST00000543885,NM_152470,uc002lbz.2,uc002lca.1,uc002lcb.1,uc010dnn.1_5end | |association_with_transcript=-219bp_to_ENST00000269439,ENST00000543885,NM_152470,uc002lbz.2,uc002lca.1,uc002lcb.1,uc010dnn.1_5end | ||
|cluster_id=chr18:43913919..43913967,+ | |||
|coexpression_cluster_id=C1799 | |coexpression_cluster_id=C1799 | ||
|description=CAGE_peak_2_at_RNF165_5end | |description=CAGE_peak_2_at_RNF165_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;8.52e-07;6 | |ontology_enrichment_disease_v019=DOID:169;8.52e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:169,8.96e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.98e-25!82;UBERON:0005743!1.29e-23!86;UBERON:0000073!1.37e-23!94;UBERON:0001016!1.37e-23!94;UBERON:0000955!6.60e-22!69;UBERON:0006238!6.60e-22!69;UBERON:0001049!4.77e-21!57;UBERON:0005068!4.77e-21!57;UBERON:0006241!4.77e-21!57;UBERON:0007135!4.77e-21!57;UBERON:0007023!6.42e-21!115;UBERON:0002616!8.62e-20!59;UBERON:0003075!4.14e-17!86;UBERON:0007284!4.14e-17!86;UBERON:0003080!4.15e-17!42;UBERON:0002346!5.56e-17!90;UBERON:0002780!6.84e-17!41;UBERON:0001890!6.84e-17!41;UBERON:0006240!6.84e-17!41;UBERON:0000924!4.63e-15!173;UBERON:0006601!4.63e-15!173;UBERON:0004121!5.94e-15!169;UBERON:0001893!6.41e-15!34;UBERON:0002020!7.69e-15!34;UBERON:0003528!7.69e-15!34;UBERON:0001869!8.56e-15!32;UBERON:0002791!2.40e-14!33;UBERON:0001950!1.07e-12!20;UBERON:0003056!1.29e-12!61;UBERON:0000153!1.63e-12!129;UBERON:0007811!1.63e-12!129;UBERON:0000956!2.89e-12!25;UBERON:0000203!2.89e-12!25;UBERON:0000033!3.41e-12!123;UBERON:0002619!3.73e-12!22;UBERON:0000065!9.02e-10!53;UBERON:0008947!1.46e-08!38;UBERON:0003258!1.46e-08!38;UBERON:0000064!1.77e-08!219;UBERON:0000922!4.55e-08!612;UBERON:0000072!1.22e-07!46;UBERON:0001004!2.05e-07!72 | |ontology_enrichment_uberon=UBERON:0001017!2.98e-25!82;UBERON:0005743!1.29e-23!86;UBERON:0000073!1.37e-23!94;UBERON:0001016!1.37e-23!94;UBERON:0000955!6.60e-22!69;UBERON:0006238!6.60e-22!69;UBERON:0001049!4.77e-21!57;UBERON:0005068!4.77e-21!57;UBERON:0006241!4.77e-21!57;UBERON:0007135!4.77e-21!57;UBERON:0007023!6.42e-21!115;UBERON:0002616!8.62e-20!59;UBERON:0003075!4.14e-17!86;UBERON:0007284!4.14e-17!86;UBERON:0003080!4.15e-17!42;UBERON:0002346!5.56e-17!90;UBERON:0002780!6.84e-17!41;UBERON:0001890!6.84e-17!41;UBERON:0006240!6.84e-17!41;UBERON:0000924!4.63e-15!173;UBERON:0006601!4.63e-15!173;UBERON:0004121!5.94e-15!169;UBERON:0001893!6.41e-15!34;UBERON:0002020!7.69e-15!34;UBERON:0003528!7.69e-15!34;UBERON:0001869!8.56e-15!32;UBERON:0002791!2.40e-14!33;UBERON:0001950!1.07e-12!20;UBERON:0003056!1.29e-12!61;UBERON:0000153!1.63e-12!129;UBERON:0007811!1.63e-12!129;UBERON:0000956!2.89e-12!25;UBERON:0000203!2.89e-12!25;UBERON:0000033!3.41e-12!123;UBERON:0002619!3.73e-12!22;UBERON:0000065!9.02e-10!53;UBERON:0008947!1.46e-08!38;UBERON:0003258!1.46e-08!38;UBERON:0000064!1.77e-08!219;UBERON:0000922!4.55e-08!612;UBERON:0000072!1.22e-07!46;UBERON:0001004!2.05e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.36e-19;20!UBERON:0002619;4.37e-19;22!UBERON:0001869;3.36e-16;32!UBERON:0000956;4.38e-16;25!UBERON:0000203;4.38e-16;25!UBERON:0002791;4.23e-15;32!UBERON:0001893;2.57e-14;34!UBERON:0003528;3.66e-14;34!UBERON:0002020;3.66e-14;34!UBERON:0002780;1.78e-13;41!UBERON:0001890;1.78e-13;41!UBERON:0000073;2.57e-11;53!UBERON:0002616;2.57e-11;53!UBERON:0000955;4.25e-10;68!UBERON:0001017;2.88e-09;75!UBERON:0001016;3.59e-09;83!UBERON:0000922;8.13e-09;49!UBERON:0001737;1.33e-07;9!UBERON:0001557;1.33e-07;9!UBERON:0000200;1.54e-07;6!UBERON:0002021;5.48e-07;5!UBERON:0000072;9.61e-07;37!UBERON:0000065;9.77e-07;44 | |ontology_enrichment_uberon_v019=UBERON:0001950;2.36e-19;20!UBERON:0002619;4.37e-19;22!UBERON:0001869;3.36e-16;32!UBERON:0000956;4.38e-16;25!UBERON:0000203;4.38e-16;25!UBERON:0002791;4.23e-15;32!UBERON:0001893;2.57e-14;34!UBERON:0003528;3.66e-14;34!UBERON:0002020;3.66e-14;34!UBERON:0002780;1.78e-13;41!UBERON:0001890;1.78e-13;41!UBERON:0000073;2.57e-11;53!UBERON:0002616;2.57e-11;53!UBERON:0000955;4.25e-10;68!UBERON:0001017;2.88e-09;75!UBERON:0001016;3.59e-09;83!UBERON:0000922;8.13e-09;49!UBERON:0001737;1.33e-07;9!UBERON:0001557;1.33e-07;9!UBERON:0000200;1.54e-07;6!UBERON:0002021;5.48e-07;5!UBERON:0000072;9.61e-07;37!UBERON:0000065;9.77e-07;44 | ||
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| ||
|short_description=p2@RNF165 | |short_description=p2@RNF165 | ||
}} | }} |
Latest revision as of 15:16, 19 September 2015
Short description: | p2@RNF165 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RNF165_5end |
Coexpression cluster: | C1799_occipital_duodenum_temporal_Wilms_brain_pineal_parietal |
Association with transcript: | -219bp_to_ENST00000269439, ENST00000543885, NM_152470, uc002lbz.2, uc002lca.1, uc002lcb.1, uc010dnn.1_5end |
EntrezGene: | RNF165 |
HGNC: | 31696 |
UniProt: | Q6ZSG1B3KVD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 8.96e-07 | 6 |