FFCP PHASE1:Hg19::chr1:87794133..87794144,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8543 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6644 | |||
|TSSclassifier=strong | |||
|UniProt=P61968 | |||
|association_with_transcript=-6bp_to_ENST00000370544,NM_006769,uc001dmi.2_5end | |||
|cluster_id=chr1:87794133..87794144,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_6_at_LMO4_5end | |||
|id=chr1:87794133..87794144,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.40e-08,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!5.85e-25!86;UBERON:0001017!8.20e-24!82;UBERON:0000073!4.44e-23!94;UBERON:0001016!4.44e-23!94;UBERON:0001049!8.12e-22!57;UBERON:0005068!8.12e-22!57;UBERON:0006241!8.12e-22!57;UBERON:0007135!8.12e-22!57;UBERON:0001869!1.14e-19!32;UBERON:0002020!1.68e-19!34;UBERON:0003528!1.68e-19!34;UBERON:0001893!3.86e-19!34;UBERON:0002780!4.83e-19!41;UBERON:0001890!4.83e-19!41;UBERON:0006240!4.83e-19!41;UBERON:0000955!1.50e-18!69;UBERON:0006238!1.50e-18!69;UBERON:0002791!1.94e-18!33;UBERON:0003075!2.43e-18!86;UBERON:0007284!2.43e-18!86;UBERON:0002346!3.92e-18!90;UBERON:0003080!5.57e-18!42;UBERON:0000956!6.86e-18!25;UBERON:0000203!6.86e-18!25;UBERON:0003056!7.24e-18!61;UBERON:0002616!9.27e-18!59;UBERON:0002619!1.19e-16!22;UBERON:0001950!2.32e-15!20;UBERON:0000924!3.66e-11!173;UBERON:0006601!3.66e-11!173;UBERON:0004121!4.54e-11!169;UBERON:0000033!1.80e-10!123;UBERON:0000153!1.28e-09!129;UBERON:0007811!1.28e-09!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;8.16e-35;25!UBERON:0000203;8.16e-35;25!UBERON:0002619;1.72e-34;22!UBERON:0001869;4.43e-34;32!UBERON:0001950;9.56e-32;20!UBERON:0002791;1.10e-31;32!UBERON:0003528;1.19e-30;34!UBERON:0002020;1.19e-30;34!UBERON:0001893;2.36e-30;34!UBERON:0002780;1.03e-23;41!UBERON:0001890;1.03e-23;41!UBERON:0000073;2.75e-17;53!UBERON:0002616;2.75e-17;53!UBERON:0001017;1.21e-13;75!UBERON:0000955;1.58e-13;68!UBERON:0001016;1.06e-11;83!UBERON:0001871;4.44e-11;6!UBERON:0000200;1.04e-10;6!UBERON:0001872;4.97e-09;5!UBERON:0002021;7.63e-09;5!UBERON:0000349;1.72e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.26e-38,32;UBERON:0001017,1.54e-36,81;UBERON:0001893,2.24e-35,34;UBERON:0002791,3.13e-35,32;UBERON:0000956,4.64e-35,25;UBERON:0000203,4.64e-35,25;UBERON:0003528,1.03e-34,34;UBERON:0002020,1.03e-34,34;UBERON:0002619,1.65e-34,22;UBERON:0002780,1.83e-33,41;UBERON:0001890,1.83e-33,41;UBERON:0003080,1.83e-33,41;UBERON:0006240,1.83e-33,41;UBERON:0001049,5.64e-33,56;UBERON:0005068,5.64e-33,56;UBERON:0006241,5.64e-33,56;UBERON:0007135,5.64e-33,56;UBERON:0000073,7.47e-32,53;UBERON:0002616,7.47e-32,53;UBERON:0001950,1.12e-31,20;UBERON:0001016,3.37e-31,89;UBERON:0000955,4.58e-28,68;UBERON:0006238,4.58e-28,68;UBERON:0003056,3.58e-27,61;UBERON:0002346,5.17e-26,86;UBERON:0003075,1.95e-25,82;UBERON:0007284,1.95e-25,82;UBERON:0010371,5.90e-18,104;UBERON:0004121,1.90e-14,171;UBERON:0000924,1.90e-14,171;UBERON:0006601,1.90e-14,171;UBERON:0010314,4.53e-12,132;UBERON:0001871,4.68e-11,6;UBERON:0000200,1.12e-10,6;UBERON:0011216,2.03e-09,223;UBERON:0001872,5.28e-09,5;UBERON:0002021,7.79e-09,5;UBERON:0000349,1.22e-08,5;UBERON:0007023,1.31e-08,114 | |||
|phase1_expression=0.181678379270557,0.856402095563933,1.55049844505568,2.00146596706261,0.893922188854576,0,0,1.89515962028049,2.08948502559871,0.982935746006035,0.697801167972428,0.218441372130172,0.527533956456907,0,0.331397375727916,0,0,0,0.975865597581014,0.61560529038394,0.204000691244253,0.626909442956176,2.28988789704845,0.821246550437305,1.88313959392204,0.0764134057479513,0.328402357799783,0.550975469195755,0,0,0.309632246632152,0,0.30120591877825,0.739508020333575,2.40148321798935,0.568676929949686,0,0,0,0.434021741431704,0.223915474239924,0.971680998056939,0.257575567634187,0.290796477559129,0.377875943688809,0,0,0,0,0.28769239232215,0.768482119587302,0.47296445977717,1.03423704220986,0,0,0,0,0.449446968890169,0,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0.502497330513487,0.521482918420201,0.217188844705117,0.605399502633369,0,0.632924774881769,0.211255286311942,0.212604299965044,0.419317291016752,0.112328631146495,0,0.16072558669708,0.285012743741249,0.59675003159727,0.91332076882317,1.75996244461323,0,0,0,0,0,1.32208974556972,0,0,0,0.382273228125229,0,0,1.05353633910031,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0.802622484269139,0,0.339928028092699,0,0,0,0,0.651083453856419,0,0.301150238155546,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0.12786256184353,3.97583067623023,1.00267582127178,3.76600949298142,0,0.486634870302636,0.756278537312543,0.443458794925128,0.527008714158756,1.30979075497713,0.728590576585084,0,0.324547393654683,0.348259474598534,0.26591592103773,0.476981248610684,0,0,0,0,0,0,0,0,0.208994966536811,0.516833518338658,0,0,0.402829317109147,0,0.24406205754817,0,0,0.357198913136319,0,0.112611480483322,0,0,0.183201743930407,1.31780417436063,0,0,0.993943903390637,1.01304409331664,0,0,0,0,0,0.49333509683432,0.311211035399766,0.269421344139376,0.163461903113459,0,0.576175924479999,0.234321431833797,0.624320153660641,0,0.149448680551801,0.352303495931295,0.323745888736263,0,0,0,0.103325781175765,0,0.494533858557114,0.910161361938026,0,0.336672227908132,0.125118519871964,0,0,0,0,0,0.358779271377724,0.640672166455702,0.211931901159562,0.600182192168805,0.103052529238439,1.28820270022815,0,0.168776332241266,0.0974370051611986,0,0.276149695926898,0.646584227275248,0,0.201504196455281,0,0.193260853163297,0,0,0.609868530647977,0.530119073285941,0.69716365721711,0.829288440122964,1.26160425437814,1.09493207722749,0,0.643240938192885,0,0,0,0.354920400119532,1.01150814046861,1.20505514941741,1.10293972732394,1.08939722046203,0.474541238222193,0.674156540800822,0.98110732562673,0.769494313892781,0,1.40241773803446,0.4115740113314,0,0,0.982827216677626,0.590789906681404,0,0.491953754172454,0,0.109750285408626,0,0.201057944823262,0.277765335475589,0.325808305310325,1.03993478527958,0,1.04337364477569,0.70445216541493,0.288732895522148,0,0.190254152234598,0,0,0,0.468008530278475,0.594524649154913,0,0,0,0.179117045405697,0,0.383382679165211,0,0.352193736052904,3.7319060797339,5.6206781832615,2.39860623510122,1.0159663086747,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0.571652865261156,0.336393253036082,0,0.36669142910475,0.129271715757778,3.57656445851882,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,1.62868092146868,0.355391948742546,0.791951872933429,0.301439377059586,0.871533458600294,1.3996218765488,0,0,0,0,0,0,0,0.205476322550383,0.716243852959582,0,0,0.431255149719035,0,2.54094624222463,2.60279707715243,3.86644406388848,2.84777651068393,2.55175500661265,0.749007023947182,0,0,0.24538298343828,0.500170521059677,0,0.207970861530807,0,0,0.117141414992713,0,0,0,1.32845119707087,0.368738337083406,0,0,0.686286847621712,0.206768026122887,0.215714200818617,0.106727557803444,0.303127571446259,0,0.30239029332968,1.48864684691266,0.61384789315225,1.40330047216537,1.02511319404561,1.53512174720011,0.321707842287215,0,2.7757744884478,0.532685175939381,2.62806899244189,1.03850885836724,1.51073491997947,0.604297247958111,0,0.736647911487171,0.229628896329213,0.364182336013434,0.262248829918848,0.451199612907412,0.308061348417659,0,0,0.316654886678627,0,0.170093705276516,0.431831832204279,0,0.270946437543853,0,0.254876273045038,1.66215201785745,0.223874754722178,0,0,2.05160100093111,0.656029291399411,0.650756789328606,0.206082023295445,1.37354197227515,0.907604499126468,0.574265537996172,0,0,2.12675580242668,0.770243085573222,0.614014698904518,2.48105830472155,0.429680979473094,0.725083469571143,1.02271952899321,0.445160178233687,0,0,0,0.2023155617111,0.464845549297286,0,0.6970372701606,0,0,1.73986598415015,0,0,0,0,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0.539617372749944,0.54907405947211,0.824686816419805,0.202182481573316,0,0.842516912477962,0,0.243713489631284,0,0.682499557039929,0,0,0,0,0,0,0,0,0.92947049429925,0.563391205064483,0.430234056612155,0.589494246078727,0,0.354761064070598,0.211107635297664,0.987884678879706,0,1.04980416073495,0.288666338176536,0,0,0.28243140233033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| |||
|short_description=p6@LMO4 | |||
}} |
Latest revision as of 15:15, 19 September 2015
Short description: | p6@LMO4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LMO4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -6bp_to_ENST00000370544, NM_006769, uc001dmi.2_5end |
EntrezGene: | LMO4 |
HGNC: | 6644 |
UniProt: | P61968 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.40e-08 | 8 |