FFCP PHASE1:Hg19::chr18:43753462..43753499,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147339 | |EntrezGene=147339 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28172 | |HGNC=28172 | ||
|TSSclassifier=strong | |||
|UniProt=Q96B23 | |UniProt=Q96B23 | ||
|association_with_transcript=-488bp_to_ENST00000282059,ENST00000321319,NM_001008239,NM_145055,uc002lbw.2,uc002lbx.2_5end | |association_with_transcript=-488bp_to_ENST00000282059,ENST00000321319,NM_001008239,NM_145055,uc002lbw.2,uc002lbx.2_5end | ||
|cluster_id=chr18:43753462..43753499,+ | |||
|description=CAGE_peak_5_at_C18orf25_5end | |description=CAGE_peak_5_at_C18orf25_5end | ||
|id=chr18:43753462..43753499,+ | |id=chr18:43753462..43753499,+ | ||
|ontology_enrichment_celltype=CL:0000791!5.86e-09!18;CL:0000789!5.86e-09!18;CL:0002420!5.86e-09!18;CL:0002419!5.86e-09!18;CL:0000790!5.86e-09!18;CL:0000542!2.16e-07!53;CL:0000051!2.16e-07!53;CL:0000084!4.97e-07!25;CL:0000827!4.97e-07!25;CL:0000838!5.35e-07!52 | |ontology_enrichment_celltype=CL:0000791!5.86e-09!18;CL:0000789!5.86e-09!18;CL:0002420!5.86e-09!18;CL:0002419!5.86e-09!18;CL:0000790!5.86e-09!18;CL:0000542!2.16e-07!53;CL:0000051!2.16e-07!53;CL:0000084!4.97e-07!25;CL:0000827!4.97e-07!25;CL:0000838!5.35e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000791;9.14e-13;18!CL:0000789;9.14e-13;18!CL:0002419;9.14e-13;18!CL:0000625;1.83e-09;11!CL:0000084;1.20e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.68e-12,18;CL:0000789,3.68e-12,18;CL:0002420,3.68e-12,18;CL:0002419,3.68e-12,18;CL:0000790,3.68e-12,18;CL:0000625,8.30e-09,11;CL:0000084,4.49e-08,25;CL:0000827,4.49e-08,25;CL:0000542,7.77e-07,53;CL:0000051,7.77e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;9.14e-13;18 | |||
|ontology_enrichment_disease=DOID:162!4.07e-09!235;DOID:14566!2.39e-08!239;DOID:0050687!1.31e-07!143 | |ontology_enrichment_disease=DOID:162!4.07e-09!235;DOID:14566!2.39e-08!239;DOID:0050687!1.31e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.57e-08!61;UBERON:0000153!6.09e-08!129;UBERON:0007811!6.09e-08!129;UBERON:0003075!1.13e-07!86;UBERON:0007284!1.13e-07!86;UBERON:0002346!2.06e-07!90;UBERON:0005743!2.11e-07!86;UBERON:0000073!2.46e-07!94;UBERON:0001016!2.46e-07!94;UBERON:0002780!9.58e-07!41;UBERON:0001890!9.58e-07!41;UBERON:0006240!9.58e-07!41 | |ontology_enrichment_uberon=UBERON:0003056!2.57e-08!61;UBERON:0000153!6.09e-08!129;UBERON:0007811!6.09e-08!129;UBERON:0003075!1.13e-07!86;UBERON:0007284!1.13e-07!86;UBERON:0002346!2.06e-07!90;UBERON:0005743!2.11e-07!86;UBERON:0000073!2.46e-07!94;UBERON:0001016!2.46e-07!94;UBERON:0002780!9.58e-07!41;UBERON:0001890!9.58e-07!41;UBERON:0006240!9.58e-07!41 | ||
|ontology_enrichment_uberon_v019=UBERON:0000956;3.09e-08;25!UBERON:0000203;3.09e-08;25!UBERON:0001869;2.76e-07;32!UBERON:0002619;7.63e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.62e-08,25;UBERON:0000203,1.62e-08,25;UBERON:0003056,2.32e-08,61;UBERON:0001869,3.84e-08,32;UBERON:0002780,2.31e-07,41;UBERON:0001890,2.31e-07,41;UBERON:0003080,2.31e-07,41;UBERON:0006240,2.31e-07,41;UBERON:0001893,2.57e-07,34;UBERON:0002619,2.57e-07,22;UBERON:0002791,2.71e-07,32;UBERON:0001016,3.46e-07,89;UBERON:0000955,4.82e-07,68;UBERON:0006238,4.82e-07,68;UBERON:0001017,5.43e-07,81 | |||
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| ||
|short_description=p5@C18orf25 | |short_description=p5@C18orf25 | ||
}} | }} |
Latest revision as of 15:08, 19 September 2015
Short description: | p5@C18orf25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C18orf25_5end |
Coexpression cluster: | NA |
Association with transcript: | -488bp_to_ENST00000282059, ENST00000321319, NM_001008239, NM_145055, uc002lbw.2, uc002lbx.2_5end |
EntrezGene: | C18orf25 |
HGNC: | 28172 |
UniProt: | Q96B23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.68e-12 | 18 |
alpha-beta T cell | 3.68e-12 | 18 |
immature T cell | 3.68e-12 | 18 |
mature T cell | 3.68e-12 | 18 |
immature alpha-beta T cell | 3.68e-12 | 18 |
CD8-positive, alpha-beta T cell | 8.30e-09 | 11 |
T cell | 4.49e-08 | 25 |
pro-T cell | 4.49e-08 | 25 |
lymphocyte | 7.77e-07 | 53 |
common lymphoid progenitor | 7.77e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 1.62e-08 | 25 |
pallium | 1.62e-08 | 25 |
pre-chordal neural plate | 2.32e-08 | 61 |
cerebral hemisphere | 3.84e-08 | 32 |
regional part of forebrain | 2.31e-07 | 41 |
forebrain | 2.31e-07 | 41 |
anterior neural tube | 2.31e-07 | 41 |
future forebrain | 2.31e-07 | 41 |
telencephalon | 2.57e-07 | 34 |
regional part of cerebral cortex | 2.57e-07 | 22 |
regional part of telencephalon | 2.71e-07 | 32 |
nervous system | 3.46e-07 | 89 |
brain | 4.82e-07 | 68 |
future brain | 4.82e-07 | 68 |
central nervous system | 5.43e-07 | 81 |