FFCP PHASE1:Hg19::chr6:70506343..70506376,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55788 | |EntrezGene=55788 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=23038 | |HGNC=23038 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=157bp_to_uc010kal.2_5end | |association_with_transcript=157bp_to_uc010kal.2_5end | ||
|cluster_id=chr6:70506343..70506376,- | |||
|coexpression_cluster_id=C1235 | |||
|description=CAGE_peak_14_at_LMBRD1_5end | |description=CAGE_peak_14_at_LMBRD1_5end | ||
|id=chr6:70506343..70506376,- | |id=chr6:70506343..70506376,- | ||
|ontology_enrichment_celltype=CL:0000624!4.02e-09!6;CL:0000623!4.53e-08!3;CL:0000825!4.53e-08!3 | |ontology_enrichment_celltype=CL:0000624!4.02e-09!6;CL:0000623!4.53e-08!3;CL:0000825!4.53e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000775;2.07e-12;3!CL:0000623;2.74e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.07e-12,3;CL:0000623,2.59e-12,3;CL:0000825,2.59e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!9.21e-16!20;UBERON:0001049!6.62e-15!57;UBERON:0005068!6.62e-15!57;UBERON:0006241!6.62e-15!57;UBERON:0007135!6.62e-15!57;UBERON:0002619!4.46e-14!22;UBERON:0000956!6.79e-14!25;UBERON:0000203!6.79e-14!25;UBERON:0001893!6.91e-14!34;UBERON:0001869!2.32e-13!32;UBERON:0007023!3.00e-13!115;UBERON:0002791!7.80e-13!33;UBERON:0002616!1.42e-12!59;UBERON:0002020!6.69e-11!34;UBERON:0003528!6.69e-11!34;UBERON:0002780!8.50e-11!41;UBERON:0001890!8.50e-11!41;UBERON:0006240!8.50e-11!41;UBERON:0000955!1.02e-10!69;UBERON:0006238!1.02e-10!69;UBERON:0003080!1.93e-10!42;UBERON:0005743!3.44e-10!86;UBERON:0001017!4.23e-10!82;UBERON:0002346!8.71e-10!90;UBERON:0000073!1.32e-08!94;UBERON:0001016!1.32e-08!94;UBERON:0003075!1.39e-08!86;UBERON:0007284!1.39e-08!86;UBERON:0002021!5.09e-07!5;UBERON:0001872!9.62e-07!5;UBERON:0003056!9.97e-07!61 | |ontology_enrichment_uberon=UBERON:0001950!9.21e-16!20;UBERON:0001049!6.62e-15!57;UBERON:0005068!6.62e-15!57;UBERON:0006241!6.62e-15!57;UBERON:0007135!6.62e-15!57;UBERON:0002619!4.46e-14!22;UBERON:0000956!6.79e-14!25;UBERON:0000203!6.79e-14!25;UBERON:0001893!6.91e-14!34;UBERON:0001869!2.32e-13!32;UBERON:0007023!3.00e-13!115;UBERON:0002791!7.80e-13!33;UBERON:0002616!1.42e-12!59;UBERON:0002020!6.69e-11!34;UBERON:0003528!6.69e-11!34;UBERON:0002780!8.50e-11!41;UBERON:0001890!8.50e-11!41;UBERON:0006240!8.50e-11!41;UBERON:0000955!1.02e-10!69;UBERON:0006238!1.02e-10!69;UBERON:0003080!1.93e-10!42;UBERON:0005743!3.44e-10!86;UBERON:0001017!4.23e-10!82;UBERON:0002346!8.71e-10!90;UBERON:0000073!1.32e-08!94;UBERON:0001016!1.32e-08!94;UBERON:0003075!1.39e-08!86;UBERON:0007284!1.39e-08!86;UBERON:0002021!5.09e-07!5;UBERON:0001872!9.62e-07!5;UBERON:0003056!9.97e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.12e-09;4!UBERON:0000923;1.12e-09;4!UBERON:0010316;1.12e-09;4!UBERON:0005291;1.12e-09;4!UBERON:0001052;1.50e-09;4!UBERON:0002050;5.35e-08;5!UBERON:0005423;5.35e-08;5!UBERON:0002021;6.78e-08;5!UBERON:0004907;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.32e-09,4;UBERON:0004907,6.13e-08,5;UBERON:0002021,7.01e-08,5 | |||
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| ||
|short_description=p14@LMBRD1 | |short_description=p14@LMBRD1 | ||
}} | }} |
Latest revision as of 15:08, 19 September 2015
Short description: | p14@LMBRD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_LMBRD1_5end |
Coexpression cluster: | C1235_neuroectodermal_neuroblastoma_Neutrophils_peripheral_Eosinophils_acute_neuroepithelioma |
Association with transcript: | 157bp_to_uc010kal.2_5end |
EntrezGene: | LMBRD1 |
HGNC: | 23038 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.07e-12 | 3 |
natural killer cell | 2.59e-12 | 3 |
pro-NK cell | 2.59e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.32e-09 | 4 |
lower digestive tract | 6.13e-08 | 5 |
occipital lobe | 7.01e-08 | 5 |