FFCP PHASE1:Hg19::chr1:8763510..8763538,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:8763510..8763538,-
|short_description=p15@RERE
|description=CAGE_peak_15_at_RERE_5end
|association_with_transcript=-232bp_to_ENST00000468247_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=473 | |EntrezGene=473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9965 | |HGNC=9965 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-232bp_to_ENST00000468247_5end | |||
|cluster_id=chr1:8763510..8763538,- | |||
|description=CAGE_peak_15_at_RERE_5end | |||
|id=chr1:8763510..8763538,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.41e-10!22;UBERON:0001950!1.92e-10!20;UBERON:0000956!9.12e-10!25;UBERON:0000203!9.12e-10!25;UBERON:0001869!1.44e-09!32;UBERON:0001893!1.68e-09!34;UBERON:0002791!4.50e-09!33;UBERON:0000924!1.54e-08!173;UBERON:0006601!1.54e-08!173;UBERON:0002020!1.82e-08!34;UBERON:0003528!1.82e-08!34;UBERON:0002780!3.55e-08!41;UBERON:0001890!3.55e-08!41;UBERON:0006240!3.55e-08!41;UBERON:0001017!4.01e-08!82;UBERON:0003080!1.52e-07!42;UBERON:0007023!1.61e-07!115;UBERON:0004121!1.98e-07!169;UBERON:0005743!3.29e-07!86;UBERON:0002346!4.15e-07!90;UBERON:0000073!8.56e-07!94;UBERON:0001016!8.56e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.15e-13;20!UBERON:0002619;3.70e-13;22!UBERON:0000956;5.84e-12;25!UBERON:0000203;5.84e-12;25!UBERON:0001869;7.59e-09;32!UBERON:0001893;1.80e-08;34!UBERON:0002791;4.01e-08;32!UBERON:0000922;1.29e-07;49!UBERON:0003528;3.50e-07;34!UBERON:0002020;3.50e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.16e-14,20;UBERON:0002619,9.54e-14,22;UBERON:0000956,2.04e-12,25;UBERON:0000203,2.04e-12,25;UBERON:0001869,2.81e-10,32;UBERON:0001893,3.73e-10,34;UBERON:0002791,3.78e-09,32;UBERON:0003528,3.25e-08,34;UBERON:0002020,3.25e-08,34;UBERON:0001017,1.11e-07,81;UBERON:0002780,3.52e-07,41;UBERON:0001890,3.52e-07,41;UBERON:0003080,3.52e-07,41;UBERON:0006240,3.52e-07,41;UBERON:0004121,5.26e-07,171;UBERON:0000924,5.26e-07,171;UBERON:0006601,5.26e-07,171 | |||
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| ||
|short_description=p15@RERE | |||
}} | }} |
Latest revision as of 15:07, 19 September 2015
Short description: | p15@RERE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_RERE_5end |
Coexpression cluster: | NA |
Association with transcript: | -232bp_to_ENST00000468247_5end |
EntrezGene: | RERE |
HGNC: | 9965 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 2.16e-14 | 20 |
regional part of cerebral cortex | 9.54e-14 | 22 |
cerebral cortex | 2.04e-12 | 25 |
pallium | 2.04e-12 | 25 |
cerebral hemisphere | 2.81e-10 | 32 |
telencephalon | 3.73e-10 | 34 |
regional part of telencephalon | 3.78e-09 | 32 |
brain grey matter | 3.25e-08 | 34 |
gray matter | 3.25e-08 | 34 |
central nervous system | 1.11e-07 | 81 |
regional part of forebrain | 3.52e-07 | 41 |
forebrain | 3.52e-07 | 41 |
anterior neural tube | 3.52e-07 | 41 |
future forebrain | 3.52e-07 | 41 |
ectoderm-derived structure | 5.26e-07 | 171 |
ectoderm | 5.26e-07 | 171 |
presumptive ectoderm | 5.26e-07 | 171 |