FFCP PHASE1:Hg19::chr12:57917054..57917065,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114785 | |EntrezGene=114785 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20445 | |HGNC=20445 | ||
|TSSclassifier=strong | |||
|UniProt=F8VZD7 | |UniProt=F8VZD7 | ||
|association_with_transcript=208bp_to_ENST00000552255_5end | |association_with_transcript=208bp_to_ENST00000552255_5end | ||
|cluster_id=chr12:57917054..57917065,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_27_at_MBD6_5end | |description=CAGE_peak_27_at_MBD6_5end | ||
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|ontology_enrichment_celltype=CL:0000766!7.75e-27!76;CL:0000763!2.30e-23!112;CL:0000049!2.30e-23!112;CL:0000839!4.08e-19!70;CL:0002057!7.86e-19!42;CL:0002194!1.04e-18!63;CL:0000576!1.04e-18!63;CL:0000040!1.04e-18!63;CL:0000559!1.04e-18!63;CL:0000860!3.66e-18!45;CL:0000037!4.28e-18!172;CL:0000566!4.28e-18!172;CL:0002009!8.77e-18!65;CL:0000557!1.73e-17!71;CL:0000988!9.03e-17!182;CL:0002032!2.15e-16!165;CL:0000837!2.15e-16!165;CL:0000738!3.49e-16!140;CL:0000094!2.73e-12!8;CL:0002087!3.79e-12!119;CL:0002031!4.04e-11!124;CL:0000081!2.16e-10!11;CL:0000134!4.47e-09!358;CL:0002320!7.49e-09!365;CL:0000219!8.52e-08!390;CL:0000034!3.95e-07!444;CL:0000048!4.81e-07!430;CL:0000723!6.06e-07!436 | |ontology_enrichment_celltype=CL:0000766!7.75e-27!76;CL:0000763!2.30e-23!112;CL:0000049!2.30e-23!112;CL:0000839!4.08e-19!70;CL:0002057!7.86e-19!42;CL:0002194!1.04e-18!63;CL:0000576!1.04e-18!63;CL:0000040!1.04e-18!63;CL:0000559!1.04e-18!63;CL:0000860!3.66e-18!45;CL:0000037!4.28e-18!172;CL:0000566!4.28e-18!172;CL:0002009!8.77e-18!65;CL:0000557!1.73e-17!71;CL:0000988!9.03e-17!182;CL:0002032!2.15e-16!165;CL:0000837!2.15e-16!165;CL:0000738!3.49e-16!140;CL:0000094!2.73e-12!8;CL:0002087!3.79e-12!119;CL:0002031!4.04e-11!124;CL:0000081!2.16e-10!11;CL:0000134!4.47e-09!358;CL:0002320!7.49e-09!365;CL:0000219!8.52e-08!390;CL:0000034!3.95e-07!444;CL:0000048!4.81e-07!430;CL:0000723!6.06e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000094;5.18e-27;8!CL:0000775;1.29e-26;3!CL:0000081;1.26e-19;11!CL:0000771;1.96e-18;2!CL:0000860;3.23e-17;33!CL:0002057;3.23e-17;33!CL:0000473;9.98e-13;39!CL:0000234;9.98e-13;39!CL:0000576;1.71e-09;48!CL:0000766;2.35e-07;69 | |ontology_enrichment_celltype_v019=CL:0000094;5.18e-27;8!CL:0000775;1.29e-26;3!CL:0000081;1.26e-19;11!CL:0000771;1.96e-18;2!CL:0000860;3.23e-17;33!CL:0002057;3.23e-17;33!CL:0000473;9.98e-13;39!CL:0000234;9.98e-13;39!CL:0000576;1.71e-09;48!CL:0000766;2.35e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000094,4.94e-27,8;CL:0000775,1.24e-26,3;CL:0000766,6.42e-20,72;CL:0000081,1.22e-19,11;CL:0000771,1.89e-18,2;CL:0000763,1.39e-14,108;CL:0000049,1.39e-14,108;CL:0000860,1.92e-14,42;CL:0002057,1.92e-14,42;CL:0000473,1.77e-12,48;CL:0000234,1.77e-12,48;CL:0002194,9.97e-10,59;CL:0000576,9.97e-10,59;CL:0000040,9.97e-10,59;CL:0000559,9.97e-10,59;CL:0000738,1.81e-09,136;CL:0002009,2.26e-09,61;CL:0002032,6.08e-09,161;CL:0000837,6.08e-09,161;CL:0000839,1.41e-08,66;CL:0000037,1.84e-08,168;CL:0000557,1.97e-08,67;CL:0000988,6.71e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.08e-12;42 | |ontology_enrichment_development_v019=CL:0002057;4.08e-12;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;1.36e-09;1!DOID:4549;1.36e-09;1!DOID:5861;1.36e-09;1!DOID:6496;1.36e-09;1 | |ontology_enrichment_disease_v019=DOID:3371;1.36e-09;1!DOID:4549;1.36e-09;1!DOID:5861;1.36e-09;1!DOID:6496;1.36e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,8.91e-10,1;DOID:4549,8.91e-10,1;DOID:5861,8.91e-10,1;DOID:6496,8.91e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.44e-21!102;UBERON:0003061!4.44e-21!102;UBERON:0002193!1.06e-20!112;UBERON:0001474!2.58e-16!86;UBERON:0002371!2.61e-15!80;UBERON:0002405!5.73e-14!115;UBERON:0004765!8.54e-13!101;UBERON:0001434!8.54e-13!101;UBERON:0000178!7.95e-10!15;UBERON:0000179!7.95e-10!15;UBERON:0000463!7.95e-10!15;UBERON:0002384!1.04e-09!375;UBERON:0003081!7.13e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!4.44e-21!102;UBERON:0003061!4.44e-21!102;UBERON:0002193!1.06e-20!112;UBERON:0001474!2.58e-16!86;UBERON:0002371!2.61e-15!80;UBERON:0002405!5.73e-14!115;UBERON:0004765!8.54e-13!101;UBERON:0001434!8.54e-13!101;UBERON:0000178!7.95e-10!15;UBERON:0000179!7.95e-10!15;UBERON:0000463!7.95e-10!15;UBERON:0002384!1.04e-09!375;UBERON:0003081!7.13e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.35e-09;15!UBERON:0000179;4.35e-09;15!UBERON:0000463;4.35e-09;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.35e-09;15!UBERON:0000179;4.35e-09;15!UBERON:0000463;4.35e-09;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.08e-12,98;UBERON:0003061,8.08e-12,98;UBERON:0002193,1.57e-10,108;UBERON:0000178,3.12e-09,15;UBERON:0000179,3.12e-09,15;UBERON:0000463,3.12e-09,15;UBERON:0001474,2.61e-08,82;UBERON:0004765,1.91e-07,90;UBERON:0002371,2.69e-07,76 | |||
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|short_description=p27@MBD6 | |short_description=p27@MBD6 | ||
}} | }} |
Latest revision as of 15:00, 19 September 2015
Short description: | p27@MBD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_MBD6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 208bp_to_ENST00000552255_5end |
EntrezGene: | MBD6 |
HGNC: | 20445 |
UniProt: | F8VZD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 4.94e-27 | 8 |
neutrophil | 1.24e-26 | 3 |
myeloid leukocyte | 6.42e-20 | 72 |
blood cell | 1.22e-19 | 11 |
eosinophil | 1.89e-18 | 2 |
myeloid cell | 1.39e-14 | 108 |
common myeloid progenitor | 1.39e-14 | 108 |
classical monocyte | 1.92e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.92e-14 | 42 |
defensive cell | 1.77e-12 | 48 |
phagocyte | 1.77e-12 | 48 |
monopoietic cell | 9.97e-10 | 59 |
monocyte | 9.97e-10 | 59 |
monoblast | 9.97e-10 | 59 |
promonocyte | 9.97e-10 | 59 |
leukocyte | 1.81e-09 | 136 |
macrophage dendritic cell progenitor | 2.26e-09 | 61 |
hematopoietic oligopotent progenitor cell | 6.08e-09 | 161 |
hematopoietic multipotent progenitor cell | 6.08e-09 | 161 |
myeloid lineage restricted progenitor cell | 1.41e-08 | 66 |
hematopoietic stem cell | 1.84e-08 | 168 |
granulocyte monocyte progenitor cell | 1.97e-08 | 67 |
hematopoietic cell | 6.71e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.08e-12 | 98 |
blood island | 8.08e-12 | 98 |
hemolymphoid system | 1.57e-10 | 108 |
blood | 3.12e-09 | 15 |
haemolymphatic fluid | 3.12e-09 | 15 |
organism substance | 3.12e-09 | 15 |
bone element | 2.61e-08 | 82 |
skeletal element | 1.91e-07 | 90 |
bone marrow | 2.69e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 8.91e-10 | 1 |
extraosseous chondrosarcoma | 8.91e-10 | 1 |
myxoid chondrosarcoma | 8.91e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 8.91e-10 | 1 |