FFCP PHASE1:Hg19::chr3:112738225..112738261,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25871 | |EntrezGene=25871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24496 | |HGNC=24496 | ||
|TSSclassifier=strong | |||
|UniProt=C9J9E3 | |UniProt=C9J9E3 | ||
|association_with_transcript=-218bp_to_ENST00000472166_5end | |association_with_transcript=-218bp_to_ENST00000472166_5end | ||
|cluster_id=chr3:112738225..112738261,- | |||
|description=CAGE_peak_4_at_C3orf17_5end | |description=CAGE_peak_4_at_C3orf17_5end | ||
|id=chr3:112738225..112738261,- | |id=chr3:112738225..112738261,- | ||
|ontology_enrichment_celltype=CL:0000738!2.82e-16!140;CL:0000988!2.83e-11!182;CL:0000037!4.78e-11!172;CL:0000566!4.78e-11!172;CL:0002031!7.86e-11!124;CL:0002087!3.58e-10!119;CL:0002032!2.48e-09!165;CL:0000837!2.48e-09!165;CL:0000838!3.35e-08!52;CL:0000542!6.41e-08!53;CL:0000051!6.41e-08!53 | |ontology_enrichment_celltype=CL:0000738!2.82e-16!140;CL:0000988!2.83e-11!182;CL:0000037!4.78e-11!172;CL:0000566!4.78e-11!172;CL:0002031!7.86e-11!124;CL:0002087!3.58e-10!119;CL:0002032!2.48e-09!165;CL:0000837!2.48e-09!165;CL:0000838!3.35e-08!52;CL:0000542!6.41e-08!53;CL:0000051!6.41e-08!53 | ||
|ontology_enrichment_celltype_v019=CL:0000094;8.56e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.73e-19,136;CL:0000037,2.21e-13,168;CL:0000988,6.75e-13,177;CL:0002031,3.72e-12,120;CL:0002087,1.65e-11,115;CL:0002032,1.06e-10,161;CL:0000837,1.06e-10,161;CL:0000838,6.85e-09,52;CL:0000542,1.40e-08,53;CL:0000051,1.40e-08,53;CL:0000094,4.97e-08,8;CL:0000766,7.44e-08,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.40e-11!57;UBERON:0005068!6.40e-11!57;UBERON:0006241!6.40e-11!57;UBERON:0007135!6.40e-11!57;UBERON:0002616!1.33e-08!59;UBERON:0003080!1.73e-08!42;UBERON:0002780!3.87e-08!41;UBERON:0001890!3.87e-08!41;UBERON:0006240!3.87e-08!41;UBERON:0000955!1.03e-07!69;UBERON:0006238!1.03e-07!69;UBERON:0002346!1.92e-07!90;UBERON:0005743!2.02e-07!86;UBERON:0003075!2.15e-07!86;UBERON:0007284!2.15e-07!86;UBERON:0000073!4.11e-07!94;UBERON:0001016!4.11e-07!94;UBERON:0001017!4.15e-07!82 | |ontology_enrichment_uberon=UBERON:0001049!6.40e-11!57;UBERON:0005068!6.40e-11!57;UBERON:0006241!6.40e-11!57;UBERON:0007135!6.40e-11!57;UBERON:0002616!1.33e-08!59;UBERON:0003080!1.73e-08!42;UBERON:0002780!3.87e-08!41;UBERON:0001890!3.87e-08!41;UBERON:0006240!3.87e-08!41;UBERON:0000955!1.03e-07!69;UBERON:0006238!1.03e-07!69;UBERON:0002346!1.92e-07!90;UBERON:0005743!2.02e-07!86;UBERON:0003075!2.15e-07!86;UBERON:0007284!2.15e-07!86;UBERON:0000073!4.11e-07!94;UBERON:0001016!4.11e-07!94;UBERON:0001017!4.15e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.93e-07;53!UBERON:0002616;1.93e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.44e-13,56;UBERON:0005068,3.44e-13,56;UBERON:0006241,3.44e-13,56;UBERON:0007135,3.44e-13,56;UBERON:0000073,2.49e-11,53;UBERON:0002616,2.49e-11,53;UBERON:0002780,1.31e-08,41;UBERON:0001890,1.31e-08,41;UBERON:0003080,1.31e-08,41;UBERON:0006240,1.31e-08,41;UBERON:0000955,2.36e-07,68;UBERON:0006238,2.36e-07,68;UBERON:0003075,3.72e-07,82;UBERON:0007284,3.72e-07,82;UBERON:0001016,5.82e-07,89 | |||
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| ||
|short_description=p4@C3orf17 | |short_description=p4@C3orf17 | ||
}} | }} |
Latest revision as of 14:58, 19 September 2015
Short description: | p4@C3orf17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C3orf17_5end |
Coexpression cluster: | NA |
Association with transcript: | -218bp_to_ENST00000472166_5end |
EntrezGene: | C3orf17 |
HGNC: | 24496 |
UniProt: | C9J9E3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.73e-19 | 136 |
hematopoietic stem cell | 2.21e-13 | 168 |
hematopoietic cell | 6.75e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 3.72e-12 | 120 |
nongranular leukocyte | 1.65e-11 | 115 |
hematopoietic oligopotent progenitor cell | 1.06e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.06e-10 | 161 |
lymphoid lineage restricted progenitor cell | 6.85e-09 | 52 |
lymphocyte | 1.40e-08 | 53 |
common lymphoid progenitor | 1.40e-08 | 53 |
granulocyte | 4.97e-08 | 8 |
myeloid leukocyte | 7.44e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.44e-13 | 56 |
neural rod | 3.44e-13 | 56 |
future spinal cord | 3.44e-13 | 56 |
neural keel | 3.44e-13 | 56 |
regional part of nervous system | 2.49e-11 | 53 |
regional part of brain | 2.49e-11 | 53 |
regional part of forebrain | 1.31e-08 | 41 |
forebrain | 1.31e-08 | 41 |
anterior neural tube | 1.31e-08 | 41 |
future forebrain | 1.31e-08 | 41 |
brain | 2.36e-07 | 68 |
future brain | 2.36e-07 | 68 |
neural plate | 3.72e-07 | 82 |
presumptive neural plate | 3.72e-07 | 82 |
nervous system | 5.82e-07 | 89 |