FFCP PHASE1:Hg19::chr11:6633406..6633456,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:6633406..6633456,- to FFCP PHASE1:Hg19::chr11:6633406..6633456,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6881 | |EntrezGene=6881 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11543 | |HGNC=11543 | ||
|TSSclassifier=strong | |||
|UniProt=Q12962 | |UniProt=Q12962 | ||
|association_with_transcript=0bp_to_ENST00000532344,uc001mej.1_5end | |||
|cluster_id=chr11:6633406..6633456,- | |||
|coexpression_cluster_id=C385 | |||
|description=CAGE_peak_1_at_TAF10_5end | |||
|id=chr11:6633406..6633456,- | |||
|ontology_enrichment_celltype=CL:0002371!8.72e-29!591;CL:0000144!3.06e-28!625;CL:0000548!4.25e-24!679;CL:0000004!4.25e-24!679;CL:0000255!4.25e-24!679;CL:0000003!6.86e-24!722;CL:0000012!7.24e-24!682;CL:0000183!2.11e-16!59;CL:0000187!1.61e-14!54;CL:0000680!9.15e-14!57;CL:0000056!9.15e-14!57;CL:0000355!9.15e-14!57;CL:0000055!1.27e-13!180;CL:0000192!1.36e-13!42;CL:0000514!1.36e-13!42;CL:0000723!1.62e-13!436;CL:0000048!1.89e-13!430;CL:0000034!5.38e-13!444;CL:0000393!1.74e-12!60;CL:0000211!1.74e-12!60;CL:0000359!2.59e-10!32;CL:0000222!2.95e-10!119;CL:0000220!2.01e-08!246;CL:0002321!3.15e-08!248;CL:0000063!6.94e-08!578;CL:0002320!6.73e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000192;7.03e-10;43!CL:0000359;9.42e-10;32!CL:0000187;5.22e-08;55!CL:0000393;7.56e-07;61!CL:0000211;7.56e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,1.71e-14,55;CL:0000723,2.08e-14,433;CL:0000048,2.43e-14,427;CL:0000034,7.26e-14,441;CL:0000680,9.41e-14,58;CL:0000056,9.41e-14,58;CL:0000355,9.41e-14,58;CL:0000192,1.55e-13,43;CL:0000514,1.55e-13,43;CL:0000393,1.73e-12,61;CL:0000211,1.73e-12,61;CL:0000359,2.59e-10,32;CL:0000222,3.78e-10,121;CL:0002321,3.33e-08,250;CL:0002320,1.80e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000514;7.03e-10;43!CL:0000355;1.08e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!2.12e-13!70;UBERON:0000486!3.41e-13!82;UBERON:0001134!2.08e-12!61;UBERON:0002036!2.08e-12!61;UBERON:0003082!2.08e-12!61;UBERON:0000914!6.95e-12!83;UBERON:0002329!6.95e-12!83;UBERON:0003077!6.95e-12!83;UBERON:0003059!6.95e-12!83;UBERON:0007282!6.95e-12!83;UBERON:0009618!6.95e-12!83;UBERON:0007285!6.95e-12!83;UBERON:0002204!1.81e-11!167;UBERON:0002385!3.19e-11!63;UBERON:0001015!3.19e-11!63;UBERON:0000383!3.19e-11!63;UBERON:0005256!3.33e-11!143;UBERON:0003081!1.11e-10!216;UBERON:0000926!1.45e-08!448;UBERON:0004120!1.45e-08!448;UBERON:0006603!1.45e-08!448;UBERON:0002384!9.47e-07!375;UBERON:0000490!9.65e-07!138 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,4.11e-15,78;UBERON:0002329,2.06e-13,71;UBERON:0003059,2.06e-13,71;UBERON:0007282,2.06e-13,71;UBERON:0004290,2.06e-13,71;UBERON:0009618,2.06e-13,71;UBERON:0000486,3.21e-13,83;UBERON:0002204,4.91e-13,167;UBERON:0000926,6.67e-13,315;UBERON:0004120,6.67e-13,315;UBERON:0006603,6.67e-13,315;UBERON:0003077,1.10e-12,72;UBERON:0007285,1.10e-12,72;UBERON:0007524,1.17e-12,73;UBERON:0001134,2.05e-12,62;UBERON:0002036,2.05e-12,62;UBERON:0003082,2.05e-12,62;UBERON:0002385,3.07e-11,64;UBERON:0001015,3.07e-11,64;UBERON:0000383,3.07e-11,64;UBERON:0005256,1.31e-09,122;UBERON:0003104,1.60e-09,160;UBERON:0009142,1.60e-09,160;UBERON:0003081,2.62e-09,203;UBERON:0000490,9.92e-08,148;UBERON:0002384,2.61e-07,371 | |||
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| ||
|short_description=p1@TAF10 | |||
}} | }} |
Latest revision as of 14:48, 19 September 2015
Short description: | p1@TAF10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TAF10_5end |
Coexpression cluster: | C385_Mesenchymal_Alveolar_Osteoblast_Smooth_Renal_Placental_Fibroblast |
Association with transcript: | 0bp_to_ENST00000532344, uc001mej.1_5end |
EntrezGene: | TAF10 |
HGNC: | 11543 |
UniProt: | Q12962 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 1.71e-14 | 55 |
somatic stem cell | 2.08e-14 | 433 |
multi fate stem cell | 2.43e-14 | 427 |
stem cell | 7.26e-14 | 441 |
muscle precursor cell | 9.41e-14 | 58 |
myoblast | 9.41e-14 | 58 |
multi-potent skeletal muscle stem cell | 9.41e-14 | 58 |
smooth muscle cell | 1.55e-13 | 43 |
smooth muscle myoblast | 1.55e-13 | 43 |
electrically responsive cell | 1.73e-12 | 61 |
electrically active cell | 1.73e-12 | 61 |
vascular associated smooth muscle cell | 2.59e-10 | 32 |
mesodermal cell | 3.78e-10 | 121 |
embryonic cell | 3.33e-08 | 250 |
connective tissue cell | 1.80e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 4.11e-15 | 78 |
somite | 2.06e-13 | 71 |
presomitic mesoderm | 2.06e-13 | 71 |
presumptive segmental plate | 2.06e-13 | 71 |
dermomyotome | 2.06e-13 | 71 |
trunk paraxial mesoderm | 2.06e-13 | 71 |
multilaminar epithelium | 3.21e-13 | 83 |
musculoskeletal system | 4.91e-13 | 167 |
mesoderm | 6.67e-13 | 315 |
mesoderm-derived structure | 6.67e-13 | 315 |
presumptive mesoderm | 6.67e-13 | 315 |
paraxial mesoderm | 1.10e-12 | 72 |
presumptive paraxial mesoderm | 1.10e-12 | 72 |
dense mesenchyme tissue | 1.17e-12 | 73 |
skeletal muscle tissue | 2.05e-12 | 62 |
striated muscle tissue | 2.05e-12 | 62 |
myotome | 2.05e-12 | 62 |
muscle tissue | 3.07e-11 | 64 |
musculature | 3.07e-11 | 64 |
musculature of body | 3.07e-11 | 64 |
trunk mesenchyme | 1.31e-09 | 122 |
mesenchyme | 1.60e-09 | 160 |
entire embryonic mesenchyme | 1.60e-09 | 160 |
lateral plate mesoderm | 2.62e-09 | 203 |
unilaminar epithelium | 9.92e-08 | 148 |
connective tissue | 2.61e-07 | 371 |