FFCP PHASE1:Hg19::chr11:6633211..6633248,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:6633211..6633248,- to FFCP PHASE1:Hg19::chr11:6633211..6633248,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6881 | |EntrezGene=6881 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11543 | |HGNC=11543 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-32bp_to_ENST00000526743_5end | |||
|cluster_id=chr11:6633211..6633248,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_TAF10_5end | |||
|id=chr11:6633211..6633248,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.07e-11;32!CL:0002328;4.91e-10;3!CL:0000192;8.95e-08;43!CL:0002593;5.86e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.79e-11,32;CL:0000192,1.19e-10,43;CL:0000514,1.19e-10,43;CL:0002328,2.03e-10,3;CL:0000393,5.12e-09,61;CL:0000211,5.12e-09,61;CL:0000187,6.26e-09,55;CL:0000680,2.71e-08,58;CL:0000056,2.71e-08,58;CL:0000355,2.71e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000514;8.95e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;4.91e-10;3!UBERON:0002031;4.91e-10;3!UBERON:0004573;2.88e-07;33!UBERON:0004571;2.88e-07;33!UBERON:0000485;3.03e-07;7!UBERON:0003513;5.11e-07;7!UBERON:0002456;5.86e-07;2!UBERON:0004089;5.86e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.28e-10,78;UBERON:0007524,1.85e-10,73;UBERON:0004815,2.03e-10,3;UBERON:0002031,2.03e-10,3;UBERON:0001637,1.31e-09,42;UBERON:0003509,1.31e-09,42;UBERON:0004572,1.31e-09,42;UBERON:0002329,1.47e-09,71;UBERON:0003059,1.47e-09,71;UBERON:0007282,1.47e-09,71;UBERON:0004290,1.47e-09,71;UBERON:0009618,1.47e-09,71;UBERON:0003077,2.28e-09,72;UBERON:0007285,2.28e-09,72;UBERON:0000485,1.04e-08,9;UBERON:0001134,1.10e-08,62;UBERON:0002036,1.10e-08,62;UBERON:0003082,1.10e-08,62;UBERON:0000486,1.33e-08,83;UBERON:0002385,2.66e-08,64;UBERON:0001015,2.66e-08,64;UBERON:0000383,2.66e-08,64;UBERON:0000490,2.85e-08,148;UBERON:0002100,1.54e-07,199;UBERON:0004573,2.03e-07,33;UBERON:0004571,2.03e-07,33;UBERON:0005256,2.25e-07,122;UBERON:0003914,3.49e-07,117;UBERON:0007500,4.17e-07,59;UBERON:0001981,4.17e-07,59;UBERON:0004537,4.17e-07,59;UBERON:0006965,4.17e-07,59;UBERON:0004089,5.09e-07,2;UBERON:0003513,7.39e-07,7 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,1.0007329835313,1.34088328328186,0.872338524100369,0,0,1.56711376919903,0.491467873003018,0.697801167972428,0,0.791300934685361,0.123766352960047,0.994192127183747,0,1.20538905604795,2.19093027116212,2.92759679274304,0.492484232307152,0.816002764977012,0,0.572471974262113,0.410623275218653,0.251085279189606,0.382067028739756,0.0821005894499457,0.157421562627358,0,0,0,1.83884244895785,2.10844143144775,1.47901604066715,0.154934401160603,0.142169232487422,0,0,0,0.434021741431704,0,0.32389366601898,0,1.16318591023652,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0,0.863077176966451,0.256160706529101,0,0,0,0,0.376484679085209,0.272906150057846,0,0.612167784741805,0.320929027076094,0,0,0.199463657621632,0,0.870627715885752,0,0,0.251248665256743,0,0.868755378820466,0.605399502633369,0,0.632924774881769,0.633765858935825,0,0.209658645508376,0,0.150176892841506,0,0.570025487482497,0.39783335439818,0.182664153764634,0,0,0.889509253863555,0.426730222566507,0.800791974072025,0,0,0,0,0,0,0,1.12101712596307,0,0,0.786021525498329,0.411202997999018,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0.443067789167242,0.541607727530031,0.512365278902701,0.260118695119756,0.657751618414705,0.552700035571697,0,0.444859689486181,0.535081656179426,0,0.679856056185397,0,0.34362744548263,0,0.637130828648193,0,0.950452044448374,0,0.127986611154418,0,0.473554504088034,0,0,1.87208137048455,0,0,0,0.255725123687061,0.722878304769133,0,0.434539556882471,0,0,0.0945348171640679,0.886917589850256,0.527008714158756,3.1434978119451,0.364295288292542,0.370784442784429,0.324547393654683,0,0.26591592103773,0,0,0.371457501329565,0.39752481473341,0.860234595106124,0.347140501607594,0,0,1.92582629358047,0.417989933073621,0.258416759169329,0,0.33472061276467,0,0,0.488124115096339,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0.264818361626438,0,1.77334191099179,2.24271040056923,1.06748995729705,0.74000264525148,0,0.269421344139376,0.653847612453835,0.151357427644931,0.576175924479999,0,0.936480230490962,0.570471821544449,0.597794722207204,0.469737994575059,0.809364721840658,0.421352420106746,0.204154171254893,0.61417158655884,0.619954687054593,0,0.741800787835671,0,0.718618141816238,0.336672227908132,0.625592599359821,0.277064115484183,0,0.919463387397059,0.150238058906597,0.113432183160021,0,0,0,0.300091096084402,0.206105058476878,0,0.37223371266318,0,0.487185025805993,0,0.184099797284599,0.323292113637624,0.355009592516614,0.302256294682921,0,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.414644220061482,0.252320850875628,0.72995471815166,3.12899064659632,2.57296375277154,0,0.928735856063958,1.44375896333917,0.473227200159376,0,0.723033089650446,0.772057809126758,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0.738155454624648,1.40241773803446,0.4115740113314,0,0,0,0.590789906681404,0.441463099414651,0,0.171567810298526,0.109750285408626,0,0.402115889646523,0.0925884451585296,0.325808305310325,0,2.88662684050547,0.231860809950154,0,0.721832238805369,0.462985512576611,0.570762456703795,0.790204397959275,0,0.246217006087397,0.234004265139238,0.445893486866185,0,0,0.141775097242386,0,0.290633938513962,0,0,0.088048434013226,0,0.144119953416961,0,0.253991577168676,0,0,1.71072446022705,0.719792448923265,0,0.285826432630578,0.112131084345361,0.87192013766656,0.07333828582095,0.258543431515556,0,0.845302752556,0.26593811658487,0,0.514414748524284,0,0.532844358032199,0.142977993658148,0,0,0,0.710783897485092,0.791951872933429,0,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0.862510299438069,0.641715181398742,0.254094624222463,0,2.31986643833309,0,0.637938751653163,1.49801404789436,0,0,0.24538298343828,0.500170521059677,0,0.623912584592421,1.78428988797162,0.157702415033935,0.117141414992713,0,2.27407504055985,0,0,0.553107505625109,0.260650843404249,0.195801157462741,1.02943027143257,0.413536052245775,0.862856803274467,0.213455115606889,0,0,0,0,0.460385919864187,0.280660094433074,0,0,0.482561763430822,2.96836132889982,0.462629081407967,0.532685175939381,0,0,1.39452454151951,0.362578348774867,1.00253235151642,0.828728900423067,0,0.728364672026868,0.655622074797121,0,0,0,1.46139224653261,0.316654886678627,0,0.680374821106063,0.215915916102139,1.54227252690289,0.270946437543853,1.00337954770971,0,1.66215201785745,0.447749509444357,0.438519753291869,0.261435451024901,0,0.328014645699706,0,0.412164046590889,0.457847324091717,0.082509499920588,0,0.650060246036521,0,0.193341436584244,0.924291702687866,0.921022048356777,0.689182862422653,0,1.45016693914229,0.340906509664404,0.267096106940212,0.165284915360978,0.192190067365106,0.127612712494584,0.2023155617111,2.32422774648643,0,0,0.616067160352178,0,0.869932992075073,0,0.143124886741991,0,0,1.33441135746677,0.255897791311334,0.42793898803392,0.636406495851874,1.56989728039846,0,0.27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|phase1_expression=0,0.642301571672949,0.140954404095971,1.0007329835313,1.34088328328186,0.872338524100369,0,0,1.56711376919903,0.491467873003018,0.697801167972428,0,0.791300934685361,0.123766352960047,0.994192127183747,0,1.20538905604795,2.19093027116212,2.92759679274304,0.492484232307152,0.816002764977012,0,0.572471974262113,0.410623275218653,0.251085279189606,0.382067028739756,0.0821005894499457,0.157421562627358,0,0,0,1.83884244895785,2.10844143144775,1.47901604066715,0.154934401160603,0.142169232487422,0,0,0,0.434021741431704,0,0.32389366601898,0,1.16318591023652,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0,0.863077176966451,0.256160706529101,0,0,0,0,0.376484679085209,0.272906150057846,0,0.612167784741805,0.320929027076094,0,0,0.199463657621632,0,0.870627715885752,0,0,0.251248665256743,0,0.868755378820466,0.605399502633369,0,0.632924774881769,0.633765858935825,0,0.209658645508376,0,0.150176892841506,0,0.570025487482497,0.39783335439818,0.182664153764634,0,0,0.889509253863555,0.426730222566507,0.800791974072025,0,0,0,0,0,0,0,1.12101712596307,0,0,0.786021525498329,0.411202997999018,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0.443067789167242,0.541607727530031,0.512365278902701,0.260118695119756,0.657751618414705,0.552700035571697,0,0.444859689486181,0.535081656179426,0,0.679856056185397,0,0.34362744548263,0,0.637130828648193,0,0.950452044448374,0,0.127986611154418,0,0.473554504088034,0,0,1.87208137048455,0,0,0,0.255725123687061,0.722878304769133,0,0.434539556882471,0,0,0.0945348171640679,0.886917589850256,0.527008714158756,3.1434978119451,0.364295288292542,0.370784442784429,0.324547393654683,0,0.26591592103773,0,0,0.371457501329565,0.39752481473341,0.860234595106124,0.347140501607594,0,0,1.92582629358047,0.417989933073621,0.258416759169329,0,0.33472061276467,0,0,0.488124115096339,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0.264818361626438,0,1.77334191099179,2.24271040056923,1.06748995729705,0.74000264525148,0,0.269421344139376,0.653847612453835,0.151357427644931,0.576175924479999,0,0.936480230490962,0.570471821544449,0.597794722207204,0.469737994575059,0.809364721840658,0.421352420106746,0.204154171254893,0.61417158655884,0.619954687054593,0,0.741800787835671,0,0.718618141816238,0.336672227908132,0.625592599359821,0.277064115484183,0,0.919463387397059,0.150238058906597,0.113432183160021,0,0,0,0.300091096084402,0.206105058476878,0,0.37223371266318,0,0.487185025805993,0,0.184099797284599,0.323292113637624,0.355009592516614,0.302256294682921,0,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.414644220061482,0.252320850875628,0.72995471815166,3.12899064659632,2.57296375277154,0,0.928735856063958,1.44375896333917,0.473227200159376,0,0.723033089650446,0.772057809126758,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0.738155454624648,1.40241773803446,0.4115740113314,0,0,0,0.590789906681404,0.441463099414651,0,0.171567810298526,0.109750285408626,0,0.402115889646523,0.0925884451585296,0.325808305310325,0,2.88662684050547,0.231860809950154,0,0.721832238805369,0.462985512576611,0.570762456703795,0.790204397959275,0,0.246217006087397,0.234004265139238,0.445893486866185,0,0,0.141775097242386,0,0.290633938513962,0,0,0.088048434013226,0,0.144119953416961,0,0.253991577168676,0,0,1.71072446022705,0.719792448923265,0,0.285826432630578,0.112131084345361,0.87192013766656,0.07333828582095,0.258543431515556,0,0.845302752556,0.26593811658487,0,0.514414748524284,0,0.532844358032199,0.142977993658148,0,0,0,0.710783897485092,0.791951872933429,0,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0.862510299438069,0.641715181398742,0.254094624222463,0,2.31986643833309,0,0.637938751653163,1.49801404789436,0,0,0.24538298343828,0.500170521059677,0,0.623912584592421,1.78428988797162,0.157702415033935,0.117141414992713,0,2.27407504055985,0,0,0.553107505625109,0.260650843404249,0.195801157462741,1.02943027143257,0.413536052245775,0.862856803274467,0.213455115606889,0,0,0,0,0.460385919864187,0.280660094433074,0,0,0.482561763430822,2.96836132889982,0.462629081407967,0.532685175939381,0,0,1.39452454151951,0.362578348774867,1.00253235151642,0.828728900423067,0,0.728364672026868,0.655622074797121,0,0,0,1.46139224653261,0.316654886678627,0,0.680374821106063,0.215915916102139,1.54227252690289,0.270946437543853,1.00337954770971,0,1.66215201785745,0.447749509444357,0.438519753291869,0.261435451024901,0,0.328014645699706,0,0.412164046590889,0.457847324091717,0.082509499920588,0,0.650060246036521,0,0.193341436584244,0.924291702687866,0.921022048356777,0.689182862422653,0,1.45016693914229,0.340906509664404,0.267096106940212,0.165284915360978,0.192190067365106,0.127612712494584,0.2023155617111,2.32422774648643,0,0,0.616067160352178,0,0.869932992075073,0,0.143124886741991,0,0,1.33441135746677,0.255897791311334,0.42793898803392,0.636406495851874,1.56989728039846,0,0.27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| ||
|short_description=p4@TAF10 | |||
}} | }} |
Latest revision as of 14:48, 19 September 2015
Short description: | p4@TAF10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TAF10_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -32bp_to_ENST00000526743_5end |
EntrezGene: | TAF10 |
HGNC: | 11543 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.79e-11 | 32 |
smooth muscle cell | 1.19e-10 | 43 |
smooth muscle myoblast | 1.19e-10 | 43 |
bronchial epithelial cell | 2.03e-10 | 3 |
electrically responsive cell | 5.12e-09 | 61 |
electrically active cell | 5.12e-09 | 61 |
muscle cell | 6.26e-09 | 55 |
muscle precursor cell | 2.71e-08 | 58 |
myoblast | 2.71e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.71e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.28e-10 | 78 |
dense mesenchyme tissue | 1.85e-10 | 73 |
lower respiratory tract epithelium | 2.03e-10 | 3 |
epithelium of bronchus | 2.03e-10 | 3 |
artery | 1.31e-09 | 42 |
arterial blood vessel | 1.31e-09 | 42 |
arterial system | 1.31e-09 | 42 |
somite | 1.47e-09 | 71 |
presomitic mesoderm | 1.47e-09 | 71 |
presumptive segmental plate | 1.47e-09 | 71 |
dermomyotome | 1.47e-09 | 71 |
trunk paraxial mesoderm | 1.47e-09 | 71 |
paraxial mesoderm | 2.28e-09 | 72 |
presumptive paraxial mesoderm | 2.28e-09 | 72 |
simple columnar epithelium | 1.04e-08 | 9 |
skeletal muscle tissue | 1.10e-08 | 62 |
striated muscle tissue | 1.10e-08 | 62 |
myotome | 1.10e-08 | 62 |
multilaminar epithelium | 1.33e-08 | 83 |
muscle tissue | 2.66e-08 | 64 |
musculature | 2.66e-08 | 64 |
musculature of body | 2.66e-08 | 64 |
unilaminar epithelium | 2.85e-08 | 148 |
trunk | 1.54e-07 | 199 |
systemic artery | 2.03e-07 | 33 |
systemic arterial system | 2.03e-07 | 33 |
trunk mesenchyme | 2.25e-07 | 122 |
epithelial tube | 3.49e-07 | 117 |
epithelial tube open at both ends | 4.17e-07 | 59 |
blood vessel | 4.17e-07 | 59 |
blood vasculature | 4.17e-07 | 59 |
vascular cord | 4.17e-07 | 59 |
midface | 5.09e-07 | 2 |
trunk blood vessel | 7.39e-07 | 7 |