FFCP PHASE1:Hg19::chr14:24780573..24780647,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:24780573..24780647,-
|short_description=p2@CIDEB
|description=CAGE_peak_2_at_CIDEB_5end
|association_with_transcript=0bp_to_ENST00000258807,ENST0000033655...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27141 | |EntrezGene=27141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1977 | |HGNC=1977 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHD4,Q9NPC1 | |UniProt=Q9UHD4,Q9NPC1 | ||
|association_with_transcript=0bp_to_ENST00000258807,ENST00000336557,ENST00000555817,NM_014430,uc001woo.2,uc001wop.2_5end | |||
|cluster_id=chr14:24780573..24780647,- | |||
|description=CAGE_peak_2_at_CIDEB_5end | |||
|id=chr14:24780573..24780647,- | |||
|ontology_enrichment_celltype=CL:0000037!1.65e-44!172;CL:0000566!1.65e-44!172;CL:0000988!1.55e-42!182;CL:0002032!2.25e-42!165;CL:0000837!2.25e-42!165;CL:0000738!3.48e-36!140;CL:0000763!1.02e-31!112;CL:0000049!1.02e-31!112;CL:0002031!3.70e-31!124;CL:0002087!3.81e-31!119;CL:0000766!2.26e-27!76;CL:0000557!5.88e-23!71;CL:0000839!7.22e-23!70;CL:0002194!2.01e-20!63;CL:0000576!2.01e-20!63;CL:0000040!2.01e-20!63;CL:0000559!2.01e-20!63;CL:0002009!6.35e-20!65;CL:0000860!2.60e-19!45;CL:0002057!1.17e-18!42;CL:0000134!7.95e-13!358;CL:0002320!2.67e-12!365;CL:0000542!1.22e-09!53;CL:0000051!1.22e-09!53;CL:0000838!3.10e-09!52;CL:0000791!7.61e-09!18;CL:0000789!7.61e-09!18;CL:0002420!7.61e-09!18;CL:0002419!7.61e-09!18;CL:0000790!7.61e-09!18;CL:0000219!3.25e-08!390;CL:0002393!5.91e-07!9;CL:0002397!5.91e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;3.77e-15;48!CL:0000766;2.60e-14;69!CL:0000860;1.74e-13;33!CL:0002057;1.74e-13;33!CL:0000473;3.27e-13;39!CL:0000234;3.27e-13;39!CL:0000763;3.72e-13;100!CL:0002087;2.06e-11;104!CL:0000791;1.03e-09;18!CL:0000789;1.03e-09;18!CL:0002419;1.03e-09;18!CL:0000988;4.91e-09;177!CL:0000738;1.23e-08;136!CL:0000084;6.78e-08;25!CL:0000625;3.39e-07;11!CL:0000542;5.78e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.47e-51,168;CL:0002032,2.21e-48,161;CL:0000837,2.21e-48,161;CL:0000988,7.95e-48,177;CL:0000738,2.99e-40,136;CL:0000763,1.56e-35,108;CL:0000049,1.56e-35,108;CL:0002087,3.12e-35,115;CL:0002031,4.97e-35,120;CL:0000766,3.15e-30,72;CL:0000839,4.05e-25,66;CL:0000557,5.12e-25,67;CL:0000473,1.34e-22,48;CL:0000234,1.34e-22,48;CL:0002194,2.23e-22,59;CL:0000576,2.23e-22,59;CL:0000040,2.23e-22,59;CL:0000559,2.23e-22,59;CL:0002009,1.35e-21,61;CL:0000860,8.44e-21,42;CL:0002057,8.44e-21,42;CL:0000542,2.12e-11,53;CL:0000051,2.12e-11,53;CL:0000838,6.23e-11,52;CL:0000134,7.51e-10,354;CL:0000791,9.30e-10,18;CL:0000789,9.30e-10,18;CL:0002420,9.30e-10,18;CL:0002419,9.30e-10,18;CL:0000790,9.30e-10,18;CL:0002320,7.28e-09,361;CL:0000084,5.95e-08,25;CL:0000827,5.95e-08,25;CL:0002393,1.24e-07,9;CL:0002397,1.24e-07,9;CL:0000625,3.49e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.63e-15;42!CL:0000049;6.02e-11;108!CL:0000790;1.03e-09;18!CL:0000051;5.78e-07;53 | |||
|ontology_enrichment_disease=DOID:8692!7.87e-08!31;DOID:1240!9.80e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.87e-09;31!DOID:1240;1.57e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,4.34e-10,39;DOID:8692,7.58e-10,31;DOID:2531,3.10e-07,51;DOID:0060083,3.10e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.80e-32!102;UBERON:0003061!8.80e-32!102;UBERON:0002193!1.05e-29!112;UBERON:0002371!1.35e-21!80;UBERON:0002405!1.00e-17!115;UBERON:0001474!2.84e-17!86;UBERON:0004765!2.31e-15!101;UBERON:0001434!2.31e-15!101;UBERON:0007023!6.21e-12!115;UBERON:0003081!4.55e-11!216;UBERON:0002384!2.34e-10!375;UBERON:0000178!4.52e-09!15;UBERON:0000179!4.52e-09!15;UBERON:0000463!4.52e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.54e-10;15!UBERON:0000179;4.54e-10;15!UBERON:0000463;4.54e-10;15!UBERON:0002390;5.77e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.49e-33,98;UBERON:0003061,3.49e-33,98;UBERON:0002193,3.58e-30,108;UBERON:0002405,6.32e-22,93;UBERON:0002371,6.68e-22,76;UBERON:0001474,3.53e-18,82;UBERON:0004765,1.62e-14,90;UBERON:0001434,2.23e-13,100;UBERON:0003081,4.62e-12,203;UBERON:0000178,5.18e-10,15;UBERON:0000179,5.18e-10,15;UBERON:0000463,5.18e-10,15;UBERON:0007023,1.08e-08,114;UBERON:0002384,1.05e-07,371 | |||
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|phase1_expression=0.181678379270557,0.642301571672949,0.845726424575827,1.0007329835313,1.34088328328186,0,0,0,1.30592814099919,0.491467873003018,2.09340350391728,2.40285509343189,4.22027165165526,0.495065411840187,0.994192127183747,0,0,0,0,0.369363174230364,0.408001382488506,0,0.572471974262113,0,0,7.33568695180332,5.82914185094615,8.34334281925,20.0615781192941,6.90892916574983,19.1971992911934,2.75826367343678,1.8072355126695,0.369754010166788,0,0,19.0840285567651,25.4837887924664,25.0680559337677,26.0413044859022,6.94137970143765,7.44955431843653,7.46969146139141,10.7594696696878,7.55751887377619,5.82201746850759,10.9241647345672,6.16751832032739,3.71647645074124,12.3707728698525,8.19714260893122,6.3850202069918,9.99762474136194,10.3277549373412,9.47985406160392,11.6710250516415,4.91231070104122,3.37085226667627,8.87643287875617,6.73950956859797,8.95071976118658,13.8537546078421,7.18069167437875,11.08184351385,11.0279510678862,3.97169657283798,3.11411124497787,15.3261685806613,4.17186334736161,8.90474263290978,7.26479403160043,3.68277635987565,4.74693581161327,20.0692521996345,20.8352213965743,28.7232344346475,41.1122789996172,38.2951076745841,29.2520567788686,15.1056754182862,13.327417372339,17.7184229151695,3.51992488922645,6.55366333514558,8.00558328477199,9.38806489646316,4.80475184443215,6.8970292794538,5.2883589822789,6.67837628174755,2.84606484554724,4.69789751496751,4.96955196562797,3.96513985737078,3.36305137788922,21.0707267820062,4.91774425284583,6.28817220398664,7.40165396398233,7.69057878797119,10.7554347989085,6.62826928028627,13.6378709885538,10.4725829472063,2.65145316727353,5.75988125917415,5.68688113906533,8.32593578216889,8.19373889627233,18.4170453156117,15.1992509782217,10.1431080007268,6.22803565280654,5.35081656179426,7.31748666634838,13.5971211237079,9.58051234004803,7.21617635513523,8.34964983664359,13.061181987288,10.4173352617027,9.50452044448374,11.1425588117552,10.7508753369711,11.2437653897111,12.0756398542449,12.3169199538157,10.6851573909108,10.6976078313403,8.83428863685074,4.87613732627923,3.35350429851818,0.255725123687061,0.722878304769133,1.50401373190767,1.44846518960824,0,2.43317435151318,0.472674085820339,0.221729397462564,0.614843499851882,3.07800827419625,2.91436230634034,2.59549109949101,1.62273696827342,0.870648686496336,0.930705723632056,6.43924685624423,4.57595928624102,2.97166001063652,0.596287222100115,0.860234595106124,0,0,0,0.275118041940067,0.417989933073621,0.775250277507987,0.35576626268671,1.00416183829401,1.20848795132744,1.52054421143703,1.46437234528902,0.367663080345869,0,3.92918804449951,4.71511682514957,4.61707069981621,0,3.79706263827252,0.732806975721629,22.4026709641308,31.022421131866,1.74437620857014,0,0,0,0.286836620748814,0,0,0,0,0.622422070799533,0.134710672069688,0.326923806226917,0.151357427644931,0,1.40592859100278,0.312160076830321,1.1409436430889,0.448346041655403,0.587172493218824,0.647491777472526,0.421352420106746,0.61246251376468,0.982674538494144,1.13658359293342,3.56400857184616,0.741800787835671,0.910161361938026,0,1.0100166837244,1.12606667884768,1.10825646193673,0.438977620880838,0.919463387397059,0.901428353439581,0.453728732640084,0.358779271377724,0.640672166455702,0.423863802319124,0.900273288253207,0.206105058476878,0,0.744467425326359,0.506328996723799,0,0.757301322732344,0.552299391853796,1.2931684545505,0,0.403008392910561,0.67824236924195,1.54608682530637,1.09098448236334,0.860413786167011,0.731842236777572,0.530119073285941,1.51052125730374,0.829288440122964,2.27088765788066,0,0,0.643240938192885,2.76269842704961,3.25057549622385,0,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,2.057870056657,1.47008711385542,6.33775174109154,0,4.72631925345123,0,0,0.343135620597051,0.329250856225877,0,1.10581869652794,1.01847289674383,0,0,0,0.231860809950154,0,1.29929802984966,0,1.14152491340759,0,0,6.89407617044712,1.17002132569619,4.90482835552803,0,0.671928512795438,0.425325291727159,0,0,0,4.43396914106349,32.2257268488407,11.4030463547425,16.7179145963675,17.6739406796932,1.07946420296687,1.52795370223311,4.68869788840188,0,1.85089486865982,0,0,0.336393253036082,0,0.66004457238855,0,10.7296933755565,0,0,1.04007436911366,1.02882949704857,2.83698264046557,0.799266537048298,0.57191197463259,1.08524321078289,0,1.62868092146868,0,1.58390374586686,0,0.871533458600294,0.599837947092342,10.9461402577071,14.5654556515317,6.32501818449095,0,0,0,0.144781306667579,0,0.179060963239896,29.2542225823106,17.9297991783754,13.1532820664306,16.9412807889268,0,0,0,1.17261385734044,0.637938751653163,12.7331194071021,32.9077605124427,12.8468809165171,0.736148950314839,1.00034104211935,0,0.415941723061614,0,0.473107245101804,0.35142424497814,0.300946099727719,2.27407504055985,2.0694614258501,0,0.368738337083406,0.434418072340414,0.391602314925481,0.343143423810856,16.9549781420768,20.4928490777686,17.3965919219614,5.15316871458641,9.98612637062982,5.44302527993425,0.248107807818777,0.306923946576125,0.280660094433074,0.384417447767103,1.02341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| ||
|short_description=p2@CIDEB | |||
}} | }} |
Latest revision as of 14:32, 19 September 2015
Short description: | p2@CIDEB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CIDEB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000258807, ENST00000336557, ENST00000555817, NM_014430, uc001woo.2, uc001wop.2_5end |
EntrezGene: | CIDEB |
HGNC: | 1977 |
UniProt: | Q9UHD4Q9NPC1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.49e-33 | 98 |
blood island | 3.49e-33 | 98 |
hemolymphoid system | 3.58e-30 | 108 |
immune system | 6.32e-22 | 93 |
bone marrow | 6.68e-22 | 76 |
bone element | 3.53e-18 | 82 |
skeletal element | 1.62e-14 | 90 |
skeletal system | 2.23e-13 | 100 |
lateral plate mesoderm | 4.62e-12 | 203 |
blood | 5.18e-10 | 15 |
haemolymphatic fluid | 5.18e-10 | 15 |
organism substance | 5.18e-10 | 15 |
adult organism | 1.08e-08 | 114 |
connective tissue | 1.05e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 4.34e-10 | 39 |
myeloid leukemia | 7.58e-10 | 31 |
hematologic cancer | 3.10e-07 | 51 |
immune system cancer | 3.10e-07 | 51 |