FFCP PHASE1:Hg19::chr1:198607856..198607888,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5788 | |EntrezGene=5788 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9666 | |HGNC=9666 | ||
|TSSclassifier=strong | |||
|UniProt=P08575,Q0VAE8,B1ALS1 | |UniProt=P08575,Q0VAE8,B1ALS1 | ||
|association_with_transcript=-248bp_to_NM_002838,NM_080921,NM_080923,uc001guq.2,uc001gur.1,uc001gus.1,uc001gut.1,uc009wze.1,uc009wzf.1,uc010ppg.1_5end | |association_with_transcript=-248bp_to_NM_002838,NM_080921,NM_080923,uc001guq.2,uc001gur.1,uc001gus.1,uc001gut.1,uc009wze.1,uc009wzf.1,uc010ppg.1_5end | ||
|cluster_id=chr1:198607856..198607888,+ | |||
|coexpression_cluster_id=C116 | |coexpression_cluster_id=C116 | ||
|description=CAGE_peak_7_at_PTPRC_5end | |description=CAGE_peak_7_at_PTPRC_5end | ||
|id=chr1:198607856..198607888,+ | |id=chr1:198607856..198607888,+ | ||
|ontology_enrichment_celltype=CL:0000542!7.21e-40!53;CL:0000051!7.21e-40!53;CL:0000838!5.13e-38!52;CL:0000037!1.57e-28!172;CL:0000566!1.57e-28!172;CL:0002032!8.91e-28!165;CL:0000837!8.91e-28!165;CL:0002087!1.17e-27!119;CL:0000988!4.23e-26!182;CL:0000738!2.55e-25!140;CL:0000791!5.03e-25!18;CL:0000789!5.03e-25!18;CL:0002420!5.03e-25!18;CL:0002419!5.03e-25!18;CL:0000790!5.03e-25!18;CL:0002031!1.78e-24!124;CL:0000084!7.08e-22!25;CL:0000827!7.08e-22!25;CL:0000625!4.60e-16!11;CL:0000945!3.90e-15!24;CL:0000826!3.90e-15!24;CL:0000624!1.85e-12!6;CL:0000134!1.26e-07!358;CL:0000898!1.85e-07!3;CL:0002320!3.24e-07!365 | |ontology_enrichment_celltype=CL:0000542!7.21e-40!53;CL:0000051!7.21e-40!53;CL:0000838!5.13e-38!52;CL:0000037!1.57e-28!172;CL:0000566!1.57e-28!172;CL:0002032!8.91e-28!165;CL:0000837!8.91e-28!165;CL:0002087!1.17e-27!119;CL:0000988!4.23e-26!182;CL:0000738!2.55e-25!140;CL:0000791!5.03e-25!18;CL:0000789!5.03e-25!18;CL:0002420!5.03e-25!18;CL:0002419!5.03e-25!18;CL:0000790!5.03e-25!18;CL:0002031!1.78e-24!124;CL:0000084!7.08e-22!25;CL:0000827!7.08e-22!25;CL:0000625!4.60e-16!11;CL:0000945!3.90e-15!24;CL:0000826!3.90e-15!24;CL:0000624!1.85e-12!6;CL:0000134!1.26e-07!358;CL:0000898!1.85e-07!3;CL:0002320!3.24e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000815;7.19e-07;2!CL:0000792;7.19e-07;2!CL:0002677;7.19e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.66e-07,53;CL:0000051,3.66e-07,53;CL:0000815,7.20e-07,2;CL:0000792,7.20e-07,2;CL:0002677,7.20e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.44e-12;1 | |||
|ontology_enrichment_disease=DOID:2531!1.95e-10!51;DOID:0060083!1.95e-10!51;DOID:0060058!1.09e-09!10 | |ontology_enrichment_disease=DOID:2531!1.95e-10!51;DOID:0060083!1.95e-10!51;DOID:0060058!1.09e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:4960;7.03e-13;1!DOID:0070004;7.03e-13;1!DOID:12603;3.44e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,7.03e-13,1;DOID:0070004,7.03e-13,1;DOID:12603,4.31e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!8.35e-10!7 | |ontology_enrichment_uberon=UBERON:0004177!8.35e-10!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;3.44e-12;1!UBERON:0001153;3.44e-12;1!UBERON:0009854;3.44e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,2.75e-12,1;UBERON:0001153,2.75e-12,1;UBERON:0001045,2.75e-12,1 | |||
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| ||
|short_description=p7@PTPRC | |short_description=p7@PTPRC | ||
}} | }} |
Latest revision as of 14:27, 19 September 2015
Short description: | p7@PTPRC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PTPRC_5end |
Coexpression cluster: | C116_myeloma_xeroderma_tonsil_CD19_spleen_lymph_trachea |
Association with transcript: | -248bp_to_NM_002838, NM_080921, NM_080923, uc001guq.2, uc001gur.1, uc001gus.1, uc001gut.1, uc009wze.1, uc009wzf.1, uc010ppg.1_5end |
EntrezGene: | PTPRC |
HGNC: | 9666 |
UniProt: | P08575Q0VAE8B1ALS1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.66e-07 | 53 |
common lymphoid progenitor | 3.66e-07 | 53 |
regulatory T cell | 7.20e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.20e-07 | 2 |
naive regulatory T cell | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 2.75e-12 | 1 |
caecum | 2.75e-12 | 1 |
midgut | 2.75e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 7.03e-13 | 1 |
myeloma | 7.03e-13 | 1 |
acute leukemia | 4.31e-12 | 1 |