FFCP PHASE1:Hg19::chr17:33396568..33396595,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=117584 | |EntrezGene=117584 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=24821 | |HGNC=24821 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_uc010cti.1_5end | |association_with_transcript=-22bp_to_uc010cti.1_5end | ||
|cluster_id=chr17:33396568..33396595,- | |||
|coexpression_cluster_id=C507 | |coexpression_cluster_id=C507 | ||
|description=CAGE_peak_8_at_RFFL_5end | |description=CAGE_peak_8_at_RFFL_5end | ||
|id=chr17:33396568..33396595,- | |id=chr17:33396568..33396595,- | ||
|ontology_enrichment_celltype=CL:0000945!5.22e-13!24;CL:0000826!5.22e-13!24;CL:0000838!4.04e-08!52;CL:0000542!6.62e-08!53;CL:0000051!6.62e-08!53;CL:0002087!2.25e-07!119;CL:0000738!6.22e-07!140;CL:0002031!7.27e-07!124 | |ontology_enrichment_celltype=CL:0000945!5.22e-13!24;CL:0000826!5.22e-13!24;CL:0000838!4.04e-08!52;CL:0000542!6.62e-08!53;CL:0000051!6.62e-08!53;CL:0002087!2.25e-07!119;CL:0000738!6.22e-07!140;CL:0002031!7.27e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.25e-23;24!CL:0000542;4.79e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.37e-23,24;CL:0000826,4.37e-23,24;CL:0000838,2.69e-15,52;CL:0000542,5.21e-15,53;CL:0000051,5.21e-15,53;CL:0002087,6.21e-12,115;CL:0002031,1.98e-11,120;CL:0000738,4.57e-10,136;CL:0002032,1.82e-08,161;CL:0000837,1.82e-08,161;CL:0000037,4.20e-08,168;CL:0000988,1.12e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;4.79e-08;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.44e-13!10 | |ontology_enrichment_disease=DOID:0060058!1.44e-13!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;7.57e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,7.40e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.34e-12!57;UBERON:0005068!1.34e-12!57;UBERON:0006241!1.34e-12!57;UBERON:0007135!1.34e-12!57;UBERON:0002616!4.86e-12!59;UBERON:0001893!1.74e-10!34;UBERON:0001017!2.08e-10!82;UBERON:0003075!8.74e-10!86;UBERON:0007284!8.74e-10!86;UBERON:0002780!1.03e-09!41;UBERON:0001890!1.03e-09!41;UBERON:0006240!1.03e-09!41;UBERON:0005743!1.07e-09!86;UBERON:0000955!1.82e-09!69;UBERON:0006238!1.82e-09!69;UBERON:0003080!2.05e-09!42;UBERON:0002791!2.88e-09!33;UBERON:0002346!3.98e-09!90;UBERON:0002298!6.89e-09!8;UBERON:0002020!9.18e-09!34;UBERON:0003528!9.18e-09!34;UBERON:0000073!2.56e-08!94;UBERON:0001016!2.56e-08!94;UBERON:0001869!9.99e-08!32;UBERON:0003056!1.36e-07!61;UBERON:0002308!1.40e-07!9;UBERON:0000125!1.40e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!1.34e-12!57;UBERON:0005068!1.34e-12!57;UBERON:0006241!1.34e-12!57;UBERON:0007135!1.34e-12!57;UBERON:0002616!4.86e-12!59;UBERON:0001893!1.74e-10!34;UBERON:0001017!2.08e-10!82;UBERON:0003075!8.74e-10!86;UBERON:0007284!8.74e-10!86;UBERON:0002780!1.03e-09!41;UBERON:0001890!1.03e-09!41;UBERON:0006240!1.03e-09!41;UBERON:0005743!1.07e-09!86;UBERON:0000955!1.82e-09!69;UBERON:0006238!1.82e-09!69;UBERON:0003080!2.05e-09!42;UBERON:0002791!2.88e-09!33;UBERON:0002346!3.98e-09!90;UBERON:0002298!6.89e-09!8;UBERON:0002020!9.18e-09!34;UBERON:0003528!9.18e-09!34;UBERON:0000073!2.56e-08!94;UBERON:0001016!2.56e-08!94;UBERON:0001869!9.99e-08!32;UBERON:0003056!1.36e-07!61;UBERON:0002308!1.40e-07!9;UBERON:0000125!1.40e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.31e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.31e-09,3;UBERON:0004854,8.31e-09,3;UBERON:0009034,8.31e-09,3;UBERON:0002095,8.31e-09,3;UBERON:0004782,8.31e-09,3;UBERON:0003281,8.31e-09,3;UBERON:0009664,8.31e-09,3;UBERON:0002296,8.31e-09,3;UBERON:0005602,8.31e-09,3;UBERON:0001179,8.31e-09,3;UBERON:0006293,8.31e-09,3 | |||
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| ||
|short_description=p8@RFFL | |short_description=p8@RFFL | ||
}} | }} |
Latest revision as of 14:17, 19 September 2015
Short description: | p8@RFFL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RFFL_5end |
Coexpression cluster: | C507_splenic_hairy_b_cord_B_xeroderma_mycosis |
Association with transcript: | -22bp_to_uc010cti.1_5end |
EntrezGene: | RFFL |
HGNC: | 24821 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.37e-23 | 24 |
pro-B cell | 4.37e-23 | 24 |
lymphoid lineage restricted progenitor cell | 2.69e-15 | 52 |
lymphocyte | 5.21e-15 | 53 |
common lymphoid progenitor | 5.21e-15 | 53 |
nongranular leukocyte | 6.21e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.98e-11 | 120 |
leukocyte | 4.57e-10 | 136 |
hematopoietic oligopotent progenitor cell | 1.82e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.82e-08 | 161 |
hematopoietic stem cell | 4.20e-08 | 168 |
hematopoietic cell | 1.12e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 8.31e-09 | 3 |
gastrointestinal system mesentery | 8.31e-09 | 3 |
stomach region | 8.31e-09 | 3 |
mesentery | 8.31e-09 | 3 |
gastrointestinal system serosa | 8.31e-09 | 3 |
mesentery of stomach | 8.31e-09 | 3 |
gut mesentery | 8.31e-09 | 3 |
dorsal mesentery | 8.31e-09 | 3 |
dorsal mesogastrium | 8.31e-09 | 3 |
peritoneal cavity | 8.31e-09 | 3 |
spleen primordium | 8.31e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 7.40e-10 | 10 |