FFCP PHASE1:Hg19::chr2:202563429..202563436,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58538 | |EntrezGene=58538 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13680 | |HGNC=13680 | ||
|TSSclassifier=strong | |||
|UniProt=F8WC25,F8WDZ0,C9K002,Q96JB8 | |UniProt=F8WC25,F8WDZ0,C9K002,Q96JB8 | ||
|association_with_transcript=-12bp_to_ENST00000315506,ENST00000315549,ENST00000359962,ENST00000374605,ENST00000409474,NM_033066,uc002uyk.3,uc002uyl.3,uc002uym.1,uc002uyn.2,uc010ftk.2_5end | |association_with_transcript=-12bp_to_ENST00000315506,ENST00000315549,ENST00000359962,ENST00000374605,ENST00000409474,NM_033066,uc002uyk.3,uc002uyl.3,uc002uym.1,uc002uyn.2,uc010ftk.2_5end | ||
|cluster_id=chr2:202563429..202563436,- | |||
|description=CAGE_peak_9_at_MPP4_5end | |description=CAGE_peak_9_at_MPP4_5end | ||
|id=chr2:202563429..202563436,- | |id=chr2:202563429..202563436,- | ||
|ontology_enrichment_celltype=CL:0000055!1.15e-13!180;CL:0000359!2.06e-12!32;CL:0000192!3.30e-12!42;CL:0000514!3.30e-12!42;CL:0000680!5.59e-11!57;CL:0000056!5.59e-11!57;CL:0000355!5.59e-11!57;CL:0000187!9.01e-09!54;CL:0002594!5.99e-08!4;CL:0000183!9.19e-08!59;CL:0000393!1.39e-07!60;CL:0000211!1.39e-07!60;CL:0002589!1.56e-07!2;CL:0000222!8.02e-07!119 | |ontology_enrichment_celltype=CL:0000055!1.15e-13!180;CL:0000359!2.06e-12!32;CL:0000192!3.30e-12!42;CL:0000514!3.30e-12!42;CL:0000680!5.59e-11!57;CL:0000056!5.59e-11!57;CL:0000355!5.59e-11!57;CL:0000187!9.01e-09!54;CL:0002594!5.99e-08!4;CL:0000183!9.19e-08!59;CL:0000393!1.39e-07!60;CL:0000211!1.39e-07!60;CL:0002589!1.56e-07!2;CL:0000222!8.02e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002253;4.66e-21;2!CL:0000515;1.60e-14;3!CL:0002563;3.10e-11;4!CL:0000056;3.10e-11;4!CL:0000680;5.70e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,6.96e-21,2;CL:0000515,3.10e-11,4;CL:0002563,3.79e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.60e-14;3!CL:0000515;3.10e-11;4 | |||
|ontology_enrichment_disease=DOID:2394!3.24e-08!14 | |ontology_enrichment_disease=DOID:2394!3.24e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!3.65e-16!42;UBERON:0003509!3.65e-16!42;UBERON:0004572!3.65e-16!42;UBERON:0001981!4.58e-13!60;UBERON:0007500!4.58e-13!60;UBERON:0004537!4.58e-13!60;UBERON:0006965!4.58e-13!60;UBERON:0004573!8.10e-12!33;UBERON:0004571!8.10e-12!33;UBERON:0004290!8.59e-11!70;UBERON:0000055!8.67e-11!69;UBERON:0004872!2.25e-10!84;UBERON:0001134!5.23e-10!61;UBERON:0002036!5.23e-10!61;UBERON:0003082!5.23e-10!61;UBERON:0000914!1.42e-09!83;UBERON:0002329!1.42e-09!83;UBERON:0003077!1.42e-09!83;UBERON:0003059!1.42e-09!83;UBERON:0007282!1.42e-09!83;UBERON:0009618!1.42e-09!83;UBERON:0007285!1.42e-09!83;UBERON:0002385!1.43e-09!63;UBERON:0001015!1.43e-09!63;UBERON:0000383!1.43e-09!63;UBERON:0002049!6.95e-09!79;UBERON:0007798!6.95e-09!79;UBERON:0000486!1.38e-08!82;UBERON:0000490!2.86e-08!138;UBERON:0001310!5.99e-08!4;UBERON:0001529!1.56e-07!2;UBERON:0007204!1.56e-07!2;UBERON:0001135!1.62e-07!15;UBERON:0000947!8.51e-07!21;UBERON:0010191!8.51e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;3.10e-11;4!UBERON:0001242;3.10e-11;4!UBERON:0001262;3.10e-11;4!UBERON:0004786;3.10e-11;4!UBERON:0004808;3.10e-11;4!UBERON:0001277;3.10e-11;4!UBERON:0002119;3.10e-11;4!UBERON:0000966;2.97e-09;5!UBERON:0005388;2.97e-09;5!UBERON:0001802;2.97e-09;5!UBERON:0004907;2.97e-09;5!UBERON:0000970;5.93e-09;20!UBERON:0002104;1.42e-08;21!UBERON:0000020;6.52e-08;23!UBERON:0001032;1.27e-07;24!UBERON:0004456;1.27e-07;24!UBERON:0000485;5.70e-07;7!UBERON:0003929;5.70e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002119,3.42e-11,4;UBERON:0001052,3.79e-11,4;UBERON:0001242,3.79e-11,4;UBERON:0001262,3.79e-11,4;UBERON:0004786,3.79e-11,4;UBERON:0004808,3.79e-11,4;UBERON:0001277,3.79e-11,4;UBERON:0004907,3.49e-09,5;UBERON:0000970,1.27e-08,21;UBERON:0002104,1.27e-08,21;UBERON:0000966,5.54e-08,6;UBERON:0005388,5.54e-08,6;UBERON:0001802,5.54e-08,6;UBERON:0000020,1.15e-07,24;UBERON:0001032,1.15e-07,24;UBERON:0004456,1.15e-07,24 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0,0.4400297149257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0.869932992075073,0.74129687641568,0.143124886741991,0,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08194319871046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58186518546373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,1.24411862352257,0.797525143673985,0,0,0.380805212168795,0,0.363697318405119,0,0,0.796191777397232,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6439605160631,0,0,0,0,0,0,0,0,0.354996002191696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@MPP4 | |short_description=p9@MPP4 | ||
}} | }} |
Latest revision as of 13:56, 19 September 2015
Short description: | p9@MPP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MPP4_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000315506, ENST00000315549, ENST00000359962, ENST00000374605, ENST00000409474, NM_033066, uc002uyk.3, uc002uyl.3, uc002uym.1, uc002uyn.2, uc010ftk.2_5end |
EntrezGene: | MPP4 |
HGNC: | 13680 |
UniProt: | F8WC25F8WDZ0C9K002Q96JB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 6.96e-21 | 2 |
skeletal muscle myoblast | 3.10e-11 | 4 |
intestinal epithelial cell | 3.79e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
left ovary | 3.42e-11 | 4 |
rectum | 3.79e-11 | 4 |
intestinal mucosa | 3.79e-11 | 4 |
wall of intestine | 3.79e-11 | 4 |
gastrointestinal system mucosa | 3.79e-11 | 4 |
gastrointestinal system epithelium | 3.79e-11 | 4 |
intestinal epithelium | 3.79e-11 | 4 |
lower digestive tract | 3.49e-09 | 5 |
eye | 1.27e-08 | 21 |
visual system | 1.27e-08 | 21 |
retina | 5.54e-08 | 6 |
photoreceptor array | 5.54e-08 | 6 |
posterior segment of eyeball | 5.54e-08 | 6 |
sense organ | 1.15e-07 | 24 |
sensory system | 1.15e-07 | 24 |
entire sense organ system | 1.15e-07 | 24 |