FFCP PHASE1:Hg19::chr11:66056596..66056622,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:66056596..66056622,-
|short_description=p1@YIF1A
|description=CAGE_peak_1_at_YIF1A_5end
|association_with_transcript=0bp_to_ENST00000359461,ENST0000037689...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10897 | |EntrezGene=10897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16688 | |HGNC=16688 | ||
|UniProt=A6NGW1, | |TSSclassifier=strong | ||
|UniProt=A6NGW1,F8W9A1,E9PP02,E9PK42 | |||
|association_with_transcript=0bp_to_ENST00000359461,ENST00000376899,ENST00000376904,ENST00000471387,ENST00000474986,ENST00000484814,ENST00000534374_5end | |||
|cluster_id=chr11:66056596..66056622,- | |||
|coexpression_cluster_id=C1147 | |||
|description=CAGE_peak_1_at_YIF1A_5end | |||
|id=chr11:66056596..66056622,- | |||
|ontology_enrichment_celltype=CL:0000055!6.62e-27!180;CL:0000220!1.56e-26!246;CL:0002321!5.33e-26!248;CL:0000548!1.32e-22!679;CL:0000004!1.32e-22!679;CL:0000255!1.32e-22!679;CL:0000012!1.42e-21!682;CL:0000222!9.66e-21!119;CL:0000183!1.06e-20!59;CL:0000680!1.76e-18!57;CL:0000056!1.76e-18!57;CL:0000355!1.76e-18!57;CL:0000187!2.45e-18!54;CL:0000144!3.08e-18!625;CL:0002371!1.72e-17!591;CL:0000192!5.41e-17!42;CL:0000514!5.41e-17!42;CL:0000393!5.80e-15!60;CL:0000211!5.80e-15!60;CL:0000066!3.47e-14!254;CL:0000359!1.88e-13!32;CL:0000057!9.89e-10!75;CL:0000003!2.55e-09!722 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.26e-12;32!CL:0000192;5.58e-12;43!CL:0000187;6.38e-10;55!CL:0000393;1.11e-07;61!CL:0000211;1.11e-07;61!CL:0000134;6.43e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.09e-26,250;CL:0000222,6.89e-21,121;CL:0000680,2.56e-18,58;CL:0000056,2.56e-18,58;CL:0000355,2.56e-18,58;CL:0000187,3.66e-18,55;CL:0000192,8.98e-17,43;CL:0000514,8.98e-17,43;CL:0000393,7.45e-15,61;CL:0000211,7.45e-15,61;CL:0000066,3.63e-14,253;CL:0000359,1.88e-13,32;CL:0000057,6.13e-10,76 | |||
|ontology_enrichment_development_v019=CL:0000514;5.58e-12;43!CL:0000355;1.30e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!8.48e-25!143;UBERON:0002100!2.08e-23!216;UBERON:0000490!1.67e-22!138;UBERON:0000486!8.96e-21!82;UBERON:0003104!4.84e-20!238;UBERON:0009142!4.84e-20!238;UBERON:0004290!5.33e-20!70;UBERON:0000914!1.01e-19!83;UBERON:0002329!1.01e-19!83;UBERON:0003077!1.01e-19!83;UBERON:0003059!1.01e-19!83;UBERON:0007282!1.01e-19!83;UBERON:0009618!1.01e-19!83;UBERON:0007285!1.01e-19!83;UBERON:0003914!7.51e-19!118;UBERON:0001134!1.41e-17!61;UBERON:0002036!1.41e-17!61;UBERON:0003082!1.41e-17!61;UBERON:0002385!6.06e-17!63;UBERON:0001015!6.06e-17!63;UBERON:0000383!6.06e-17!63;UBERON:0002049!6.01e-16!79;UBERON:0007798!6.01e-16!79;UBERON:0004872!1.19e-13!84;UBERON:0000055!3.57e-13!69;UBERON:0000481!4.04e-13!347;UBERON:0000119!1.06e-12!312;UBERON:0000475!1.76e-12!365;UBERON:0001637!1.77e-12!42;UBERON:0003509!1.77e-12!42;UBERON:0004572!1.77e-12!42;UBERON:0000483!3.15e-12!309;UBERON:0001981!4.35e-12!60;UBERON:0007500!4.35e-12!60;UBERON:0004537!4.35e-12!60;UBERON:0006965!4.35e-12!60;UBERON:0004535!3.54e-10!110;UBERON:0001009!4.45e-10!113;UBERON:0009569!1.02e-09!113;UBERON:0000926!1.69e-09!448;UBERON:0004120!1.69e-09!448;UBERON:0006603!1.69e-09!448;UBERON:0004573!8.75e-09!33;UBERON:0004571!8.75e-09!33;UBERON:0003102!2.26e-08!95;UBERON:0000468!1.46e-07!659;UBERON:0004119!2.28e-07!169;UBERON:0000925!2.28e-07!169;UBERON:0006595!2.28e-07!169;UBERON:0001048!6.64e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.83e-09;42!UBERON:0003509;7.83e-09;42!UBERON:0004572;7.83e-09;42!UBERON:0003914;4.46e-08;74!UBERON:0004573;7.43e-08;33!UBERON:0004571;7.43e-08;33!UBERON:0007500;9.07e-08;56!UBERON:0001981;9.07e-08;56!UBERON:0004537;9.07e-08;56!UBERON:0002049;1.61e-07;75!UBERON:0007798;1.61e-07;75!UBERON:0000055;7.93e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,4.96e-25,148;UBERON:0003104,2.39e-24,160;UBERON:0009142,2.39e-24,160;UBERON:0002100,2.53e-23,199;UBERON:0005256,1.66e-22,122;UBERON:0007503,2.21e-22,78;UBERON:0000486,1.15e-20,83;UBERON:0002329,7.25e-20,71;UBERON:0003059,7.25e-20,71;UBERON:0007282,7.25e-20,71;UBERON:0004290,7.25e-20,71;UBERON:0009618,7.25e-20,71;UBERON:0007524,1.71e-19,73;UBERON:0003077,5.10e-19,72;UBERON:0007285,5.10e-19,72;UBERON:0003914,6.77e-19,117;UBERON:0001134,1.93e-17,62;UBERON:0002036,1.93e-17,62;UBERON:0003082,1.93e-17,62;UBERON:0002385,8.03e-17,64;UBERON:0001015,8.03e-17,64;UBERON:0000383,8.03e-17,64;UBERON:0002049,1.02e-15,78;UBERON:0007798,1.02e-15,78;UBERON:0000119,1.26e-13,309;UBERON:0004872,1.99e-13,83;UBERON:0000483,3.89e-13,306;UBERON:0000055,5.97e-13,68;UBERON:0001637,1.77e-12,42;UBERON:0003509,1.77e-12,42;UBERON:0004572,1.77e-12,42;UBERON:0007500,7.24e-12,59;UBERON:0001981,7.24e-12,59;UBERON:0004537,7.24e-12,59;UBERON:0006965,7.24e-12,59;UBERON:0004535,5.56e-10,109;UBERON:0001009,6.98e-10,112;UBERON:0009569,1.88e-09,112;UBERON:0004573,8.75e-09,33;UBERON:0004571,8.75e-09,33;UBERON:0003102,2.43e-08,99;UBERON:0004119,6.28e-08,160;UBERON:0000925,6.28e-08,160;UBERON:0006595,6.28e-08,160;UBERON:0006554,1.03e-07,47;UBERON:0001048,2.49e-07,160;UBERON:0001008,4.36e-07,48 | |||
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| ||
|short_description=p1@YIF1A | |||
}} | }} |
Latest revision as of 13:40, 19 September 2015
Short description: | p1@YIF1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_YIF1A_5end |
Coexpression cluster: | C1147_Mesenchymal_Renal_Alveolar_Fibroblast_Placental_Pericytes_Hepatic |
Association with transcript: | 0bp_to_ENST00000359461, ENST00000376899, ENST00000376904, ENST00000471387, ENST00000474986, ENST00000484814, ENST00000534374_5end |
EntrezGene: | YIF1A |
HGNC: | 16688 |
UniProt: | A6NGW1F8W9A1E9PP02E9PK42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.09e-26 | 250 |
mesodermal cell | 6.89e-21 | 121 |
muscle precursor cell | 2.56e-18 | 58 |
myoblast | 2.56e-18 | 58 |
multi-potent skeletal muscle stem cell | 2.56e-18 | 58 |
muscle cell | 3.66e-18 | 55 |
smooth muscle cell | 8.98e-17 | 43 |
smooth muscle myoblast | 8.98e-17 | 43 |
electrically responsive cell | 7.45e-15 | 61 |
electrically active cell | 7.45e-15 | 61 |
epithelial cell | 3.63e-14 | 253 |
vascular associated smooth muscle cell | 1.88e-13 | 32 |
fibroblast | 6.13e-10 | 76 |