FFCP PHASE1:Hg19::chr14:24630902..24630948,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10379 | |EntrezGene=10379 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6131 | |HGNC=6131 | ||
|TSSclassifier=strong | |||
|UniProt=Q00978 | |UniProt=Q00978 | ||
|association_with_transcript=-402bp_to_BC035716_5end | |association_with_transcript=-402bp_to_BC035716_5end | ||
|cluster_id=chr14:24630902..24630948,+ | |||
|coexpression_cluster_id=C413 | |||
|description=CAGE_peak_2_at_IRF9_5end | |description=CAGE_peak_2_at_IRF9_5end | ||
|id=chr14:24630902..24630948,+ | |id=chr14:24630902..24630948,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.46e-22!140;CL:0002057!2.27e-21!42;CL:0002087!3.07e-20!119;CL:0000860!1.05e-18!45;CL:0002031!1.65e-18!124;CL:0000988!1.16e-13!182;CL:0000037!1.18e-13!172;CL:0000566!1.18e-13!172;CL:0000766!2.17e-13!76;CL:0002032!3.30e-13!165;CL:0000837!3.30e-13!165;CL:0002194!1.25e-10!63;CL:0000576!1.25e-10!63;CL:0000040!1.25e-10!63;CL:0000559!1.25e-10!63;CL:0002009!2.51e-10!65;CL:0000839!8.40e-10!70;CL:0000838!1.36e-09!52;CL:0000542!1.96e-09!53;CL:0000051!1.96e-09!53;CL:0000557!2.16e-09!71 | |ontology_enrichment_celltype=CL:0000738!1.46e-22!140;CL:0002057!2.27e-21!42;CL:0002087!3.07e-20!119;CL:0000860!1.05e-18!45;CL:0002031!1.65e-18!124;CL:0000988!1.16e-13!182;CL:0000037!1.18e-13!172;CL:0000566!1.18e-13!172;CL:0000766!2.17e-13!76;CL:0002032!3.30e-13!165;CL:0000837!3.30e-13!165;CL:0002194!1.25e-10!63;CL:0000576!1.25e-10!63;CL:0000040!1.25e-10!63;CL:0000559!1.25e-10!63;CL:0002009!2.51e-10!65;CL:0000839!8.40e-10!70;CL:0000838!1.36e-09!52;CL:0000542!1.96e-09!53;CL:0000051!1.96e-09!53;CL:0000557!2.16e-09!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.15e-27;33!CL:0002057;5.15e-27;33!CL:0000473;3.58e-19;39!CL:0000234;3.58e-19;39!CL:0000576;5.45e-17;48!CL:0000766;1.19e-12;69!CL:0002087;1.80e-11;104!CL:0000738;1.40e-08;136!CL:0000945;1.19e-07;24!CL:0000542;9.84e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.12e-34,136;CL:0000860,3.30e-33,42;CL:0002057,3.30e-33,42;CL:0002087,4.74e-32,115;CL:0002031,1.04e-29,120;CL:0000473,6.50e-29,48;CL:0000234,6.50e-29,48;CL:0000766,8.63e-25,72;CL:0000037,9.53e-24,168;CL:0002032,2.16e-23,161;CL:0000837,2.16e-23,161;CL:0000988,4.42e-22,177;CL:0002194,1.25e-21,59;CL:0000576,1.25e-21,59;CL:0000040,1.25e-21,59;CL:0000559,1.25e-21,59;CL:0002009,1.70e-20,61;CL:0000839,4.89e-19,66;CL:0000557,1.47e-18,67;CL:0000763,2.00e-12,108;CL:0000049,2.00e-12,108;CL:0000838,1.42e-11,52;CL:0000542,3.41e-11,53;CL:0000051,3.41e-11,53;CL:0000945,6.49e-08,24;CL:0000826,6.49e-08,24;CL:0000134,6.72e-08,354;CL:0002320,1.32e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.30e-24;42!CL:0000051;9.84e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.97e-14!102;UBERON:0003061!2.97e-14!102;UBERON:0002193!4.51e-14!112;UBERON:0002371!1.03e-08!80;UBERON:0001474!9.07e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.84e-23,98;UBERON:0003061,1.84e-23,98;UBERON:0002193,1.60e-20,108;UBERON:0002371,4.51e-18,76;UBERON:0004765,9.01e-16,90;UBERON:0001474,9.21e-16,82;UBERON:0002405,1.43e-15,93;UBERON:0001434,1.75e-13,100;UBERON:0003081,6.74e-10,203;UBERON:0002204,3.11e-07,167;UBERON:0002384,8.57e-07,371 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0.247532705920093,0,0,0,0,0,0.492484232307152,0.612002073732759,0.313454721478088,0.572471974262113,0.273748850145768,0.251085279189606,4.35556412763322,5.7470412614962,5.74588703589859,1.96682138424452,0.383829398097213,0.928896739896456,0.919421224478927,0,0,0.232401601740905,0.426507697462265,0,2.21598163412751,0.802177789880567,1.08505435357926,0.671746422719773,0,0,1.59938062657521,2.64513160582167,1.69808842831471,2.32429036905685,0,2.16794459626573,6.90461741573161,5.12321413058201,6.14853797710322,2.41321976515633,2.5819387343353,5.41705946377367,1.50593871634084,0.545812300115692,2.69668181334102,9.18251677112708,5.1348644332175,4.47535988059329,5.27762080298746,4.58766412529753,5.96714650745772,11.6083695451434,11.3477044938228,9.34233373493363,7.03496262718881,4.17186334736161,7.16723187526885,9.6863920421339,9.20694089968912,11.3926459478718,0.633765858935825,1.27562579979026,1.88692780957538,1.23561494261145,1.20141514273205,0.803627933485401,1.42506371870624,2.38700012638908,3.10529061399878,3.51992488922645,1.09227722252426,3.55803701545422,1.70692089026603,1.60158394814405,1.72425731986345,1.32208974556972,2.86216126360609,0,0.587237189370939,0.764546456250458,1.32171328579026,1.12101712596307,0,1.37696839079683,0,0.822405995998037,3.00935691703221,0.977766799900771,1.4203434172042,1.94826728407911,2.89667187901451,2.06224135232386,4.2091439970888,4.06205795647523,2.68991771423918,5.46249259751489,2.46656856905514,1.10540007114339,1.15921234294021,0.889719378972363,1.87278579662799,0,0.906474741580529,1.14966148080576,2.40539211837841,1.26509846009751,0.318565414324097,3.25541726928209,0.950452044448374,1.6563263098555,1.53583933385302,0,0.947109008176067,2.46338399076314,2.41928091869679,1.33720097891754,1.88271725047639,0,2.01210257911091,0.12786256184353,0.361439152384566,0,0.144846518960824,0,1.94653948121054,0.283604451492204,0.665188192387692,0.263504357079378,0.523916301990851,0.364295288292542,0.370784442784429,0,0,0.26591592103773,0.238490624305342,1.14398982156026,1.11437250398869,1.19257444420023,1.72046919021225,0.347140501607594,0.56530794192401,0.419499436209906,1.10047216776027,0.417989933073621,0.258416759169329,0.71153252537342,0.66944122552934,0,0,0,0.367663080345869,0.81014194788176,0,0.22452937262617,0.225222960966644,0,0,0,11.8602375692457,15.511210565933,0,0,0.25326102332916,0.264818361626438,0.286836620748814,0,0,0,0.74000264525148,0,0.134710672069688,0.326923806226917,0.151357427644931,0,1.17160715916898,0,0,0,0,0,0,0,0,0,4.75201142912821,2.71993622206413,0,0,0,0,0,0.438977620880838,0,0.600952235626387,0.226864366320042,0,0.213557388818567,0.423863802319124,0,0.412210116953756,0.515281080091258,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.460249493211497,0.161646056818812,0,0.10075209822764,0,0.57978255948989,0.545492241181669,0,0,0,0,0.10366105501537,0,0,3.12899064659632,2.57296375277154,0,0,0.721879481669586,0.354920400119532,0,0.241011029883482,0.220587945464788,0,0,0,0.196221465125346,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0.737930631258681,0.171567810298526,0.219500570817251,1.1240175325762,1.60846355858609,0.185176890317059,3.9096996637239,0,0,0.34779121492523,0,1.29929802984966,0.462985512576611,0.761016608938393,0,1.71697232418975,1.47730203652438,0,0.148631162288728,0,2.01578553838631,2.55195175036296,0.0895585227028483,0,0,0.985326475791887,1.32072651019839,0.207328115540772,0,0,1.07946420296687,1.52795370223311,1.17217447210047,0,0.102827492703324,0.300343057843917,2.28661146104463,0.224262168690721,0,0,0.517086863031111,0,0,1.06375246633948,0,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0,0,0,1.80863626235752,0.871533458600294,0.899756920638513,0,0.502257091432126,0,0,0,0,0.579125226670317,0.205476322550383,0.179060963239896,0.448340575974109,2.36436912242313,1.2937654491571,0.77005821767849,0.254094624222463,0,0,0,0,12.7331194071021,8.97484377612075,11.189218862773,0,1.00034104211935,0.271265023699736,0.207970861530807,0.178428988797162,0.315404830067869,0.117141414992713,0.300946099727719,2.27407504055985,0,0,0.368738337083406,0.260650843404249,0.783204629850962,0.686286847621712,0.82707210449155,0.431428401637234,1.60091336705167,0,0,0,0,0.460385919864187,0,0.128139149255701,0,0,0,0,0.532685175939381,0.492762936082855,0.519254429183621,1.16210378459959,0,0.200506470303285,0,0.114814448164607,0.182091168006717,0,0.902399225814824,0,0,0,0.211103257785751,2.27466768141793,0.340187410553031,0.215915916102139,1.54227252690289,0.270946437543853,1.50506932156456,1.52925763827023,0,0.447749509444357,0.657779629937804,0,0.512900250232778,0.984043937099117,0.325378394664303,0.206082023295445,0.0915694648183434,0,0,0,0,0.870036464629098,0,0,0,0.107420244868274,0.435050081742686,0,0.178064071293475,0,0,0.382838137483752,0,0,0,0.6970372701606,8.3169066647544,0.532306030317022,0,0.37064843820784,0.715624433709956,0,0.31637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| ||
|short_description=p2@IRF9 | |short_description=p2@IRF9 | ||
}} | }} |
Latest revision as of 13:37, 19 September 2015
Short description: | p2@IRF9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IRF9_5end |
Coexpression cluster: | C413_CD14_Smooth_gall_mesothelioma_meningioma_Fibroblast_Neutrophils |
Association with transcript: | -402bp_to_BC035716_5end |
EntrezGene: | IRF9 |
HGNC: | 6131 |
UniProt: | Q00978 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.12e-34 | 136 |
classical monocyte | 3.30e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.30e-33 | 42 |
nongranular leukocyte | 4.74e-32 | 115 |
hematopoietic lineage restricted progenitor cell | 1.04e-29 | 120 |
defensive cell | 6.50e-29 | 48 |
phagocyte | 6.50e-29 | 48 |
myeloid leukocyte | 8.63e-25 | 72 |
hematopoietic stem cell | 9.53e-24 | 168 |
hematopoietic oligopotent progenitor cell | 2.16e-23 | 161 |
hematopoietic multipotent progenitor cell | 2.16e-23 | 161 |
hematopoietic cell | 4.42e-22 | 177 |
monopoietic cell | 1.25e-21 | 59 |
monocyte | 1.25e-21 | 59 |
monoblast | 1.25e-21 | 59 |
promonocyte | 1.25e-21 | 59 |
macrophage dendritic cell progenitor | 1.70e-20 | 61 |
myeloid lineage restricted progenitor cell | 4.89e-19 | 66 |
granulocyte monocyte progenitor cell | 1.47e-18 | 67 |
myeloid cell | 2.00e-12 | 108 |
common myeloid progenitor | 2.00e-12 | 108 |
lymphoid lineage restricted progenitor cell | 1.42e-11 | 52 |
lymphocyte | 3.41e-11 | 53 |
common lymphoid progenitor | 3.41e-11 | 53 |
lymphocyte of B lineage | 6.49e-08 | 24 |
pro-B cell | 6.49e-08 | 24 |
mesenchymal cell | 6.72e-08 | 354 |
connective tissue cell | 1.32e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.84e-23 | 98 |
blood island | 1.84e-23 | 98 |
hemolymphoid system | 1.60e-20 | 108 |
bone marrow | 4.51e-18 | 76 |
skeletal element | 9.01e-16 | 90 |
bone element | 9.21e-16 | 82 |
immune system | 1.43e-15 | 93 |
skeletal system | 1.75e-13 | 100 |
lateral plate mesoderm | 6.74e-10 | 203 |
musculoskeletal system | 3.11e-07 | 167 |
connective tissue | 8.57e-07 | 371 |