FFCP PHASE1:Hg19::chr5:102594418..102594445,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90355 | |EntrezGene=90355 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25052 | |HGNC=25052 | ||
|TSSclassifier=strong | |||
|UniProt=Q96GV9 | |UniProt=Q96GV9 | ||
|association_with_transcript=0bp_to_NM_033211,uc003kog.1_5end | |association_with_transcript=0bp_to_NM_033211,uc003kog.1_5end | ||
|cluster_id=chr5:102594418..102594445,+ | |||
|description=CAGE_peak_2_at_C5orf30_5end | |description=CAGE_peak_2_at_C5orf30_5end | ||
|id=chr5:102594418..102594445,+ | |id=chr5:102594418..102594445,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.05e-09!180 | |ontology_enrichment_celltype=CL:0000055!8.05e-09!180 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.80e-12!57;UBERON:0005068!6.80e-12!57;UBERON:0006241!6.80e-12!57;UBERON:0007135!6.80e-12!57;UBERON:0002616!1.16e-11!59;UBERON:0001017!4.28e-11!82;UBERON:0000073!5.45e-11!94;UBERON:0001016!5.45e-11!94;UBERON:0000955!2.53e-10!69;UBERON:0006238!2.53e-10!69;UBERON:0005743!5.60e-10!86;UBERON:0001893!1.27e-09!34;UBERON:0002780!2.21e-09!41;UBERON:0001890!2.21e-09!41;UBERON:0006240!2.21e-09!41;UBERON:0002791!2.33e-09!33;UBERON:0002346!2.94e-09!90;UBERON:0003080!3.20e-09!42;UBERON:0001869!3.77e-09!32;UBERON:0002020!5.38e-09!34;UBERON:0003528!5.38e-09!34;UBERON:0003075!9.41e-09!86;UBERON:0007284!9.41e-09!86;UBERON:0002619!2.18e-08!22;UBERON:0000956!3.75e-08!25;UBERON:0000203!3.75e-08!25;UBERON:0001950!9.62e-08!20;UBERON:0003056!1.51e-07!61;UBERON:0000924!2.96e-07!173;UBERON:0006601!2.96e-07!173;UBERON:0004121!7.93e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.53e-08;32!UBERON:0002619;3.42e-08;22!UBERON:0001893;4.30e-08;34!UBERON:0002791;4.53e-08;32!UBERON:0003528;8.96e-08;34!UBERON:0002020;8.96e-08;34!UBERON:0000956;9.14e-08;25!UBERON:0000203;9.14e-08;25!UBERON:0001950;1.01e-07;20!UBERON:0002780;2.63e-07;41!UBERON:0001890;2.63e-07;41!UBERON:0000073;9.67e-07;53!UBERON:0002616;9.67e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.40e-12,89;UBERON:0001049,4.09e-12,56;UBERON:0005068,4.09e-12,56;UBERON:0006241,4.09e-12,56;UBERON:0007135,4.09e-12,56;UBERON:0000073,2.05e-11,53;UBERON:0002616,2.05e-11,53;UBERON:0001017,3.56e-11,81;UBERON:0000955,2.09e-10,68;UBERON:0006238,2.09e-10,68;UBERON:0001893,1.13e-09,34;UBERON:0002346,1.77e-09,86;UBERON:0002780,1.98e-09,41;UBERON:0001890,1.98e-09,41;UBERON:0003080,1.98e-09,41;UBERON:0006240,1.98e-09,41;UBERON:0010314,2.61e-09,132;UBERON:0001869,3.38e-09,32;UBERON:0003528,4.84e-09,34;UBERON:0002020,4.84e-09,34;UBERON:0003075,5.75e-09,82;UBERON:0007284,5.75e-09,82;UBERON:0002791,5.86e-09,32;UBERON:0002619,1.98e-08,22;UBERON:0000956,3.41e-08,25;UBERON:0000203,3.41e-08,25;UBERON:0003056,5.58e-08,61;UBERON:0001950,8.80e-08,20;UBERON:0004121,5.75e-07,171;UBERON:0000924,5.75e-07,171;UBERON:0006601,5.75e-07,171 | |||
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| ||
|short_description=p2@C5orf30 | |short_description=p2@C5orf30 | ||
}} | }} |
Latest revision as of 13:24, 19 September 2015
Short description: | p2@C5orf30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C5orf30_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_033211, uc003kog.1_5end |
EntrezGene: | C5orf30 |
HGNC: | 25052 |
UniProt: | Q96GV9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 3.40e-12 | 89 |
neural tube | 4.09e-12 | 56 |
neural rod | 4.09e-12 | 56 |
future spinal cord | 4.09e-12 | 56 |
neural keel | 4.09e-12 | 56 |
regional part of nervous system | 2.05e-11 | 53 |
regional part of brain | 2.05e-11 | 53 |
central nervous system | 3.56e-11 | 81 |
brain | 2.09e-10 | 68 |
future brain | 2.09e-10 | 68 |
telencephalon | 1.13e-09 | 34 |
neurectoderm | 1.77e-09 | 86 |
regional part of forebrain | 1.98e-09 | 41 |
forebrain | 1.98e-09 | 41 |
anterior neural tube | 1.98e-09 | 41 |
future forebrain | 1.98e-09 | 41 |
structure with developmental contribution from neural crest | 2.61e-09 | 132 |
cerebral hemisphere | 3.38e-09 | 32 |
brain grey matter | 4.84e-09 | 34 |
gray matter | 4.84e-09 | 34 |
neural plate | 5.75e-09 | 82 |
presumptive neural plate | 5.75e-09 | 82 |
regional part of telencephalon | 5.86e-09 | 32 |
regional part of cerebral cortex | 1.98e-08 | 22 |
cerebral cortex | 3.41e-08 | 25 |
pallium | 3.41e-08 | 25 |
pre-chordal neural plate | 5.58e-08 | 61 |
neocortex | 8.80e-08 | 20 |
ectoderm-derived structure | 5.75e-07 | 171 |
ectoderm | 5.75e-07 | 171 |
presumptive ectoderm | 5.75e-07 | 171 |