FFCP PHASE1:Hg19::chr15:85525066..85525136,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5151 | |EntrezGene=5151 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8793 | |HGNC=8793 | ||
|TSSclassifier=strong | |||
|UniProt=O60658 | |UniProt=O60658 | ||
|association_with_transcript=-68bp_to_ENST00000394553,NM_002605,NM_173454,uc002blh.2,uc002bli.2,uc002blj.2,uc010bnc.2,uc010bnd.2_5end | |association_with_transcript=-68bp_to_ENST00000394553,NM_002605,NM_173454,uc002blh.2,uc002bli.2,uc002blj.2,uc010bnc.2,uc010bnd.2_5end | ||
|cluster_id=chr15:85525066..85525136,+ | |||
|description=CAGE_peak_1_at_PDE8A_5end | |description=CAGE_peak_1_at_PDE8A_5end | ||
|id=chr15:85525066..85525136,+ | |id=chr15:85525066..85525136,+ | ||
|ontology_enrichment_celltype=CL:0002087!1.37e-24!119;CL:0002031!8.69e-23!124;CL:0000738!3.87e-22!140;CL:0000860!2.16e-21!45;CL:0002194!5.64e-21!63;CL:0000576!5.64e-21!63;CL:0000040!5.64e-21!63;CL:0000559!5.64e-21!63;CL:0002009!6.09e-21!65;CL:0002057!1.04e-20!42;CL:0000557!2.73e-20!71;CL:0000839!2.57e-19!70;CL:0000766!2.97e-19!76;CL:0002032!1.36e-09!165;CL:0000837!1.36e-09!165;CL:0000037!4.29e-09!172;CL:0000566!4.29e-09!172;CL:0000988!1.23e-07!182;CL:0002393!4.21e-07!9;CL:0002397!4.21e-07!9;CL:0000134!4.98e-07!358 | |ontology_enrichment_celltype=CL:0002087!1.37e-24!119;CL:0002031!8.69e-23!124;CL:0000738!3.87e-22!140;CL:0000860!2.16e-21!45;CL:0002194!5.64e-21!63;CL:0000576!5.64e-21!63;CL:0000040!5.64e-21!63;CL:0000559!5.64e-21!63;CL:0002009!6.09e-21!65;CL:0002057!1.04e-20!42;CL:0000557!2.73e-20!71;CL:0000839!2.57e-19!70;CL:0000766!2.97e-19!76;CL:0002032!1.36e-09!165;CL:0000837!1.36e-09!165;CL:0000037!4.29e-09!172;CL:0000566!4.29e-09!172;CL:0000988!1.23e-07!182;CL:0002393!4.21e-07!9;CL:0002397!4.21e-07!9;CL:0000134!4.98e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.50e-14;33!CL:0002057;2.50e-14;33!CL:0000473;1.26e-12;39!CL:0000234;1.26e-12;39!CL:0000576;1.92e-12;48!CL:0000766;8.57e-10;69!CL:0002087;6.32e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,7.17e-24,115;CL:0002031,3.23e-22,120;CL:0000738,9.04e-22,136;CL:0000473,4.16e-21,48;CL:0000234,4.16e-21,48;CL:0000860,7.35e-21,42;CL:0002057,7.35e-21,42;CL:0002194,5.10e-20,59;CL:0000576,5.10e-20,59;CL:0000040,5.10e-20,59;CL:0000559,5.10e-20,59;CL:0002009,5.58e-20,61;CL:0000557,1.92e-19,67;CL:0000839,1.61e-18,66;CL:0000766,1.62e-18,72;CL:0002032,2.68e-09,161;CL:0000837,2.68e-09,161;CL:0000037,7.67e-09,168;CL:0000988,2.41e-07,177;CL:0002393,3.81e-07,9;CL:0002397,3.81e-07,9;CL:0000134,7.91e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.79e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.36e-16!112;UBERON:0002390!2.52e-16!102;UBERON:0003061!2.52e-16!102;UBERON:0002405!4.42e-16!115;UBERON:0002371!1.40e-15!80;UBERON:0007023!3.16e-14!115;UBERON:0001474!1.51e-13!86;UBERON:0004765!1.91e-12!101;UBERON:0001434!1.91e-12!101;UBERON:0003081!5.12e-08!216;UBERON:0002204!6.51e-07!167 | |ontology_enrichment_uberon=UBERON:0002193!2.36e-16!112;UBERON:0002390!2.52e-16!102;UBERON:0003061!2.52e-16!102;UBERON:0002405!4.42e-16!115;UBERON:0002371!1.40e-15!80;UBERON:0007023!3.16e-14!115;UBERON:0001474!1.51e-13!86;UBERON:0004765!1.91e-12!101;UBERON:0001434!1.91e-12!101;UBERON:0003081!5.12e-08!216;UBERON:0002204!6.51e-07!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.41e-15,98;UBERON:0003061,1.41e-15,98;UBERON:0002193,2.18e-15,108;UBERON:0002371,8.43e-15,76;UBERON:0007023,3.37e-14,114;UBERON:0002405,8.35e-14,93;UBERON:0001474,9.51e-13,82;UBERON:0001434,8.27e-11,100;UBERON:0004765,1.59e-10,90;UBERON:0003081,3.59e-09,203 | |||
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| ||
|short_description=p1@PDE8A | |short_description=p1@PDE8A | ||
}} | }} |
Latest revision as of 13:23, 19 September 2015
Short description: | p1@PDE8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PDE8A_5end |
Coexpression cluster: | NA |
Association with transcript: | -68bp_to_ENST00000394553, NM_002605, NM_173454, uc002blh.2, uc002bli.2, uc002blj.2, uc010bnc.2, uc010bnd.2_5end |
EntrezGene: | PDE8A |
HGNC: | 8793 |
UniProt: | O60658 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 7.17e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 3.23e-22 | 120 |
leukocyte | 9.04e-22 | 136 |
defensive cell | 4.16e-21 | 48 |
phagocyte | 4.16e-21 | 48 |
classical monocyte | 7.35e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.35e-21 | 42 |
monopoietic cell | 5.10e-20 | 59 |
monocyte | 5.10e-20 | 59 |
monoblast | 5.10e-20 | 59 |
promonocyte | 5.10e-20 | 59 |
macrophage dendritic cell progenitor | 5.58e-20 | 61 |
granulocyte monocyte progenitor cell | 1.92e-19 | 67 |
myeloid lineage restricted progenitor cell | 1.61e-18 | 66 |
myeloid leukocyte | 1.62e-18 | 72 |
hematopoietic oligopotent progenitor cell | 2.68e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.68e-09 | 161 |
hematopoietic stem cell | 7.67e-09 | 168 |
hematopoietic cell | 2.41e-07 | 177 |
intermediate monocyte | 3.81e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.81e-07 | 9 |
mesenchymal cell | 7.91e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.41e-15 | 98 |
blood island | 1.41e-15 | 98 |
hemolymphoid system | 2.18e-15 | 108 |
bone marrow | 8.43e-15 | 76 |
adult organism | 3.37e-14 | 114 |
immune system | 8.35e-14 | 93 |
bone element | 9.51e-13 | 82 |
skeletal system | 8.27e-11 | 100 |
skeletal element | 1.59e-10 | 90 |
lateral plate mesoderm | 3.59e-09 | 203 |