FFCP PHASE1:Hg19::chr19:51412411..51412426,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9622 | |EntrezGene=9622 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6365 | |HGNC=6365 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_uc002pud.1_5end | |association_with_transcript=-19bp_to_uc002pud.1_5end | ||
|cluster_id=chr19:51412411..51412426,- | |||
|coexpression_cluster_id=C249 | |coexpression_cluster_id=C249 | ||
|description=CAGE_peak_4_at_KLK4_5end | |description=CAGE_peak_4_at_KLK4_5end | ||
|id=chr19:51412411..51412426,- | |id=chr19:51412411..51412426,- | ||
|ontology_enrichment_celltype=CL:0002553!8.62e-12!1;CL:0000167!1.06e-11!1;CL:0000164!1.06e-11!1;CL:0000502!1.06e-11!1;CL:0000172!1.06e-11!1;CL:0000173!1.06e-11!1;CL:0002351!1.06e-11!1 | |ontology_enrichment_celltype=CL:0002553!8.62e-12!1;CL:0000167!1.06e-11!1;CL:0000164!1.06e-11!1;CL:0000502!1.06e-11!1;CL:0000172!1.06e-11!1;CL:0000173!1.06e-11!1;CL:0002351!1.06e-11!1 | ||
|ontology_enrichment_celltype_v019=CL:0002553;1.23e-66;1!CL:0000167;4.66e-66;1!CL:0000164;4.66e-66;1!CL:0000502;4.66e-66;1!CL:0000172;4.66e-66;1!CL:0000173;4.66e-66;1!CL:0000150;1.21e-08;9!CL:0000163;1.21e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.23e-66,1;CL:0000167,4.66e-66,1;CL:0000164,4.66e-66,1;CL:0000502,4.66e-66,1;CL:0000172,4.66e-66,1;CL:0000173,4.66e-66,1;CL:0002351,4.66e-66,1;CL:0000150,1.21e-08,9;CL:0000163,1.21e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002351;4.66e-66;1!UBERON:0009847;3.27e-23;3!UBERON:0003353;3.27e-23;3 | |||
|ontology_enrichment_disease=DOID:4430!1.06e-11!1;DOID:0060060!3.28e-11!1;DOID:0060061!3.28e-11!1;DOID:8691!3.28e-11!1 | |ontology_enrichment_disease=DOID:4430!1.06e-11!1;DOID:0060060!3.28e-11!1;DOID:0060061!3.28e-11!1;DOID:8691!3.28e-11!1 | ||
|ontology_enrichment_disease_v019=DOID:4430;4.66e-66;1!DOID:169;2.74e-12;6!DOID:171;6.56e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,4.66e-66,1;DOID:169,2.74e-12,6;DOID:171,6.56e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000988!7.51e-14!3;UBERON:0001301!1.31e-11!1;UBERON:0007023!3.21e-07!115 | |ontology_enrichment_uberon=UBERON:0000988!7.51e-14!3;UBERON:0001301!1.31e-11!1;UBERON:0007023!3.21e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002367;2.47e-07;11!UBERON:0010147;2.47e-07;11!UBERON:0003937;7.92e-07;12!UBERON:0005399;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005153,2.82e-08,37;UBERON:0002367,2.47e-07,11;UBERON:0010147,2.47e-07,11;UBERON:0009846,2.47e-07,11;UBERON:0003353,2.47e-07,11;UBERON:0004902,2.47e-07,11;UBERON:0003820,2.47e-07,11;UBERON:0009847,2.47e-07,11;UBERON:0003937,7.92e-07,12;UBERON:0005399,7.92e-07,12;UBERON:0005157,9.72e-07,47 | |||
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|short_description=p4@KLK4 | |short_description=p4@KLK4 | ||
}} | }} |
Latest revision as of 13:16, 19 September 2015
Short description: | p4@KLK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KLK4_5end |
Coexpression cluster: | C249_nonsmall_small_smallcell_occipital_somatostatinoma_maxillary_medial |
Association with transcript: | -19bp_to_uc002pud.1_5end |
EntrezGene: | KLK4 |
HGNC: | 6365 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.23e-66 | 1 |
peptide hormone secreting cell | 4.66e-66 | 1 |
enteroendocrine cell | 4.66e-66 | 1 |
type D enteroendocrine cell | 4.66e-66 | 1 |
somatostatin secreting cell | 4.66e-66 | 1 |
pancreatic D cell | 4.66e-66 | 1 |
progenitor cell of endocrine pancreas | 4.66e-66 | 1 |
glandular epithelial cell | 1.21e-08 | 9 |
endocrine cell | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
epithelial bud | 2.82e-08 | 37 |
prostate gland | 2.47e-07 | 11 |
male accessory sex gland | 2.47e-07 | 11 |
embryonic cloacal epithelium | 2.47e-07 | 11 |
epithelium of hindgut | 2.47e-07 | 11 |
urogenital sinus epithelium | 2.47e-07 | 11 |
prostate bud | 2.47e-07 | 11 |
prostate field | 2.47e-07 | 11 |
sex gland | 7.92e-07 | 12 |
male reproductive gland | 7.92e-07 | 12 |
epithelial fold | 9.72e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 4.66e-66 | 1 |
neuroendocrine tumor | 2.74e-12 | 6 |
neuroectodermal tumor | 6.56e-08 | 10 |