FFCP PHASE1:Hg19::chr1:8586069..8586080,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:8586069..8586080,- to FFCP PHASE1:Hg19::chr1:8586069..8586080,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=473 | |EntrezGene=473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9965 | |HGNC=9965 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_ENST00000464972_5end | |||
|cluster_id=chr1:8586069..8586080,- | |||
|description=CAGE_peak_35_at_RERE_5end | |||
|id=chr1:8586069..8586080,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;1.31e-14;1!CL:0002625;1.31e-14;1!CL:0002581;1.31e-14;1!CL:0000216;1.31e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,7.13e-15,1;CL:0002625,7.13e-15,1;CL:0000216,7.13e-15,1;CL:0002581,9.36e-15,1 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.31e-14;1!UBERON:0006965;5.94e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.31e-14;1!DOID:1357;1.31e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.84e-14,1;DOID:1357,1.84e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.40e-27!115;UBERON:0001049!2.91e-13!57;UBERON:0005068!2.91e-13!57;UBERON:0006241!2.91e-13!57;UBERON:0007135!2.91e-13!57;UBERON:0002616!3.03e-12!59;UBERON:0000955!3.38e-11!69;UBERON:0006238!3.38e-11!69;UBERON:0002780!9.06e-11!41;UBERON:0001890!9.06e-11!41;UBERON:0006240!9.06e-11!41;UBERON:0003080!2.67e-10!42;UBERON:0001017!5.11e-10!82;UBERON:0005743!9.97e-10!86;UBERON:0001893!1.90e-09!34;UBERON:0000153!4.10e-09!129;UBERON:0007811!4.10e-09!129;UBERON:0003075!4.30e-09!86;UBERON:0007284!4.30e-09!86;UBERON:0002791!7.96e-09!33;UBERON:0000033!1.03e-08!123;UBERON:0000073!1.61e-08!94;UBERON:0001016!1.61e-08!94;UBERON:0002020!2.89e-08!34;UBERON:0003528!2.89e-08!34;UBERON:0001869!3.60e-08!32;UBERON:0002346!3.96e-08!90;UBERON:0003056!5.02e-07!61;UBERON:0004121!9.65e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001874;1.31e-14;1!UBERON:0006834;1.31e-14;1!UBERON:0001136;1.31e-14;1!UBERON:0001343;1.31e-14;1!UBERON:0001764;1.31e-14;1!UBERON:0001825;1.31e-14;1!UBERON:0004910;1.31e-14;1!UBERON:0004813;1.31e-14;1!UBERON:0003296;3.15e-14;4!UBERON:0010133;3.15e-14;4!UBERON:0001894;1.59e-08;7!UBERON:0001905;5.94e-08;2!UBERON:0000007;5.94e-08;2!UBERON:0002702;5.94e-08;2!UBERON:0002757;5.94e-08;2!UBERON:0010134;5.94e-08;2!UBERON:0004909;5.94e-08;2!UBERON:0005408;5.94e-08;2!UBERON:0005406;5.94e-08;2!UBERON:0001899;5.94e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,5.42e-15,1;UBERON:0001136,7.13e-15,1;UBERON:0001343,7.13e-15,1;UBERON:0004910,7.13e-15,1;UBERON:0005154,7.13e-15,1;UBERON:0005295,7.13e-15,1;UBERON:0004813,7.13e-15,1;UBERON:0005297,7.13e-15,1;UBERON:0005294,7.13e-15,1;UBERON:0010141,7.13e-15,1;UBERON:0005891,7.13e-15,1;UBERON:0001874,1.07e-14,1;UBERON:0001764,1.84e-14,1;UBERON:0001825,1.84e-14,1;UBERON:0003296,4.70e-14,4;UBERON:0010133,4.70e-14,4;UBERON:0001894,1.99e-08,7;UBERON:0006222,1.99e-08,7;UBERON:0004909,4.38e-08,2;UBERON:0005406,5.02e-08,2;UBERON:0000007,6.58e-08,2;UBERON:0001905,8.04e-08,2;UBERON:0002757,8.04e-08,2;UBERON:0010134,8.04e-08,2;UBERON:0005408,8.04e-08,2;UBERON:0001899,8.04e-08,2;UBERON:0002702,9.19e-08,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0.626909442956176,0.286235987131057,0,0,0.152826811495903,0,0,0.393364276848904,0,0,0,0,0,0.542270404062111,0,0,0,0,0.217010870715852,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0,0.569212969109448,0,0,0,0,0,0.590129310341499,0.786021525498329,0.205601498999509,0.167186495390678,0,0,0,0,0,0.221533894583621,0.270803863765016,0,0.260118695119756,0,0,0,0.444859689486181,0,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0.144846518960824,0,0,0.378139268656271,0.443458794925128,0,0.654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0.570471821544449,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0.554128230968366,0,0,0,0,0.358779271377724,0.640672166455702,0.211931901159562,0,0.206105058476878,0.772921620136887,0,0.168776332241266,0.0974370051611986,0.504867548488229,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0.265059536642971,0,0,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0.648119116109707,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0,0.829312462163088,1.00883967391873,0.25248486685276,0,0,0,3.4214489204541,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0.514414748524284,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0.157702415033935,0,0.300946099727719,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0.431428401637234,0,0,0,0,0.248107807818777,0,0,0,0,0.160853921143607,1.48418066444991,0,0,0,0,0.116210378459959,0.120859449591622,0.200506470303285,0.184161977871793,0,0.182091168006717,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0.296964680832639,0.614321404198464,0,0.140669416410513,0,0,0.211125408127993,1.39473591775749,0.276283915531148,0,0,0,0,0.0898683511473268,0.179021174675609,0,0.197286811273867,0,0,0,0.371072392647405,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0.173624994933292,0,0.723578631752448,0,1.65868889896837,0.591095237907095,0.438770794307945,0.21787692703798,0.139423744278603,1.53900517007594,0,0,0.269272933229316,0.325942115766024,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0.943615861729479,0,0,0,0,0.242780379534093,0,0,0.61214552326098,0.126373159256976,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0.0821154570532092,0.290967049465258,0.176512253383001,0.451961481561065,0,0,0.189932387867636,0,0,1.06726497369676,0.19980960958213,0,0,0.171594997861965,0.14405479798815,0,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.546746009922222,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0.653174720218818,0,0.082092520749339,0,0.113312091520126,0.146552233678082,0,0,0.52893040697076,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0,0,0.243585196761792,0,0,0.5013797880454,0,0.327872630709804,1.09937867375164,0,0.244052529803926,1.001527445652,0,0.998361463831671,0.620964029413834,0.138348634936231,0,0.151649117541648,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690860683462397,0,0.967809053062115,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.770750701157514,0,0.798169295285756,0.615349092722265,0,0.691572524642179,0.645902582527404,0,0,0,0.183428598521679,0,0,0,0,0.150420656698515,0,0,0.261906694481422,0,0,0.540300676947157,0,0.413373593002368,0.443910671357348,0,0,0.496211178389294,0,0,0.535701835878287,1.00885116665647,0,1.13831095675649,0.354809480650555,0.115233987555779,0,0.611727596791485,0.72350050919134,0,0,0.156986185701028,1.41404030924402,0,0,0,0.47775168788705,0.714765441766563,0.158013611732727,0.11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| 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| ||
|short_description=p35@RERE | |||
}} | }} |
Latest revision as of 13:12, 19 September 2015
Short description: | p35@RERE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_RERE_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000464972_5end |
EntrezGene: | RERE |
HGNC: | 9965 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 7.13e-15 | 1 |
seminiferous tubule epithelial cell | 7.13e-15 | 1 |
Sertoli cell | 7.13e-15 | 1 |
perirenal preadipocyte | 9.36e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 5.42e-15 | 1 |
mesothelium | 7.13e-15 | 1 |
seminiferous tubule of testis | 7.13e-15 | 1 |
epithelium of male gonad | 7.13e-15 | 1 |
epithelial cord | 7.13e-15 | 1 |
sex cord | 7.13e-15 | 1 |
seminiferous tubule epithelium | 7.13e-15 | 1 |
testis sex cord | 7.13e-15 | 1 |
genital ridge | 7.13e-15 | 1 |
primitive sex cord of indifferent gonad | 7.13e-15 | 1 |
coelomic epithelium | 7.13e-15 | 1 |
putamen | 1.07e-14 | 1 |
maxillary sinus | 1.84e-14 | 1 |
paranasal sinus | 1.84e-14 | 1 |
gland of diencephalon | 4.70e-14 | 4 |
neuroendocrine gland | 4.70e-14 | 4 |
diencephalon | 1.99e-08 | 7 |
future diencephalon | 1.99e-08 | 7 |
epithelium of gonad | 4.38e-08 | 2 |
perirenal fat | 5.02e-08 | 2 |
pituitary gland | 6.58e-08 | 2 |
pineal body | 8.04e-08 | 2 |
regional part of epithalamus | 8.04e-08 | 2 |
secretory circumventricular organ | 8.04e-08 | 2 |
circumventricular organ | 8.04e-08 | 2 |
epithalamus | 8.04e-08 | 2 |
middle frontal gyrus | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.84e-14 | 1 |
maxillary sinus cancer | 1.84e-14 | 1 |