FFCP PHASE1:Hg19::chr1:8585945..8586056,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:8585945..8586056,- to FFCP PHASE1:Hg19::chr1:8585945..8586056,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=473 | |EntrezGene=473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9965 | |HGNC=9965 | ||
|TSSclassifier=strong | |||
|UniProt=B1AKN3 | |UniProt=B1AKN3 | ||
|association_with_transcript=0bp_to_ENST00000377464_5end | |||
|cluster_id=chr1:8585945..8586056,- | |||
|coexpression_cluster_id=C2297 | |||
|description=CAGE_peak_3_at_RERE_5end | |||
|id=chr1:8585945..8586056,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.71e-07;18!CL:0000789;7.71e-07;18!CL:0002419;7.71e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.47e-07,18;CL:0000789,9.47e-07,18;CL:0002420,9.47e-07,18;CL:0002419,9.47e-07,18;CL:0000790,9.47e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.30e-07;82!CL:0000790;7.71e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.13e-43!115;UBERON:0001049!9.66e-26!57;UBERON:0005068!9.66e-26!57;UBERON:0006241!9.66e-26!57;UBERON:0007135!9.66e-26!57;UBERON:0002616!1.87e-23!59;UBERON:0000955!1.42e-21!69;UBERON:0006238!1.42e-21!69;UBERON:0002780!5.70e-20!41;UBERON:0001890!5.70e-20!41;UBERON:0006240!5.70e-20!41;UBERON:0001017!6.30e-20!82;UBERON:0003080!9.29e-20!42;UBERON:0005743!1.01e-18!86;UBERON:0001893!8.23e-17!34;UBERON:0002020!1.55e-16!34;UBERON:0003528!1.55e-16!34;UBERON:0003075!2.42e-16!86;UBERON:0007284!2.42e-16!86;UBERON:0002791!3.55e-16!33;UBERON:0000073!5.36e-16!94;UBERON:0001016!5.36e-16!94;UBERON:0001869!9.05e-16!32;UBERON:0002346!3.54e-15!90;UBERON:0000153!1.87e-14!129;UBERON:0007811!1.87e-14!129;UBERON:0002619!2.67e-14!22;UBERON:0000033!1.61e-13!123;UBERON:0001950!4.43e-13!20;UBERON:0003056!4.01e-12!61;UBERON:0000956!1.25e-11!25;UBERON:0000203!1.25e-11!25;UBERON:0004121!5.55e-10!169;UBERON:0000924!1.72e-09!173;UBERON:0006601!1.72e-09!173;UBERON:0003076!3.55e-07!15;UBERON:0003057!3.55e-07!15;UBERON:0002420!8.23e-07!9;UBERON:0007245!8.23e-07!9;UBERON:0010009!8.23e-07!9;UBERON:0010011!8.23e-07!9;UBERON:0000454!8.23e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;7.46e-15;53!UBERON:0002616;7.46e-15;53!UBERON:0002780;8.51e-15;41!UBERON:0001890;8.51e-15;41!UBERON:0002619;9.89e-15;22!UBERON:0001893;1.25e-14;34!UBERON:0003528;2.95e-14;34!UBERON:0002020;2.95e-14;34!UBERON:0001869;3.06e-14;32!UBERON:0002791;3.93e-14;32!UBERON:0001950;1.80e-13;20!UBERON:0000956;9.34e-12;25!UBERON:0000203;9.34e-12;25!UBERON:0007023;1.90e-11;114!UBERON:0001017;2.43e-10;75!UBERON:0000955;6.48e-10;68!UBERON:0001016;5.25e-08;83!UBERON:0002420;5.79e-07;9!UBERON:0007245;5.79e-07;9!UBERON:0010009;5.79e-07;9!UBERON:0010011;5.79e-07;9!UBERON:0000454;5.79e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.27e-43,114;UBERON:0001049,5.38e-26,56;UBERON:0005068,5.38e-26,56;UBERON:0006241,5.38e-26,56;UBERON:0007135,5.38e-26,56;UBERON:0000073,1.23e-24,53;UBERON:0002616,1.23e-24,53;UBERON:0000955,4.01e-21,68;UBERON:0006238,4.01e-21,68;UBERON:0001017,5.96e-20,81;UBERON:0002780,6.32e-20,41;UBERON:0001890,6.32e-20,41;UBERON:0003080,6.32e-20,41;UBERON:0006240,6.32e-20,41;UBERON:0003075,1.97e-17,82;UBERON:0007284,1.97e-17,82;UBERON:0001016,7.79e-17,89;UBERON:0001893,1.02e-16,34;UBERON:0003528,1.93e-16,34;UBERON:0002020,1.93e-16,34;UBERON:0002346,5.03e-16,86;UBERON:0001869,1.17e-15,32;UBERON:0002791,1.66e-15,32;UBERON:0002619,1.63e-14,22;UBERON:0010371,1.90e-13,104;UBERON:0001950,2.85e-13,20;UBERON:0003056,5.12e-12,61;UBERON:0000956,1.82e-11,25;UBERON:0000203,1.82e-11,25;UBERON:0004121,9.84e-10,171;UBERON:0000924,9.84e-10,171;UBERON:0006601,9.84e-10,171;UBERON:0010314,2.32e-08,132;UBERON:0003076,2.86e-07,15;UBERON:0003057,2.86e-07,15;UBERON:0002420,6.72e-07,9;UBERON:0007245,6.72e-07,9;UBERON:0010009,6.72e-07,9;UBERON:0010011,6.72e-07,9;UBERON:0000454,6.72e-07,9 | |||
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| ||
|short_description=p3@RERE | |||
}} | }} |
Latest revision as of 13:10, 19 September 2015
Short description: | p3@RERE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RERE_5end |
Coexpression cluster: | C2297_cerebellum_pituitary_insula_putamen_nucleus_parietal_caudate |
Association with transcript: | 0bp_to_ENST00000377464_5end |
EntrezGene: | RERE |
HGNC: | 9965 |
UniProt: | B1AKN3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.47e-07 | 18 |
alpha-beta T cell | 9.47e-07 | 18 |
immature T cell | 9.47e-07 | 18 |
mature T cell | 9.47e-07 | 18 |
immature alpha-beta T cell | 9.47e-07 | 18 |