FFCP PHASE1:Hg19::chr3:71180088..71180107,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:71180088..71180107,-
|short_description=p48@FOXP1
|description=CAGE_peak_48_at_FOXP1_5end
|association_with_transcript=0bp_to_NM_001244815_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27086 | |EntrezGene=27086 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3823 | |HGNC=3823 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFD3 | |UniProt=E9PFD3 | ||
|association_with_transcript=0bp_to_NM_001244815_5end | |||
|cluster_id=chr3:71180088..71180107,- | |||
|description=CAGE_peak_48_at_FOXP1_5end | |||
|id=chr3:71180088..71180107,- | |||
|ontology_enrichment_celltype=CL:0000624!7.84e-07!6;CL:0000542!9.19e-07!53;CL:0000051!9.19e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0002591;5.78e-10;1!CL:0000945;5.04e-09;24!CL:0000097;5.12e-08;5!CL:0000624;8.88e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,6.91e-10,1;CL:0000542,1.19e-09,53;CL:0000051,1.19e-09,53;CL:0000945,3.96e-09,24;CL:0000826,3.96e-09,24;CL:0000097,6.31e-08,5;CL:0002028,6.31e-08,5;CL:0000838,1.34e-07,52;CL:0000624,8.39e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;5.78e-10;1!DOID:0070004;5.78e-10;1!DOID:12603;5.78e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,4.06e-10,1;DOID:4960,5.79e-10,1;DOID:0070004,5.79e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.98e-23!115;UBERON:0001950!4.90e-11!20;UBERON:0002619!1.20e-10!22;UBERON:0002780!4.16e-10!41;UBERON:0001890!4.16e-10!41;UBERON:0006240!4.16e-10!41;UBERON:0003080!1.12e-09!42;UBERON:0001869!1.15e-09!32;UBERON:0001893!1.86e-09!34;UBERON:0000956!9.54e-09!25;UBERON:0000203!9.54e-09!25;UBERON:0002791!9.66e-09!33;UBERON:0002020!1.29e-07!34;UBERON:0003528!1.29e-07!34;UBERON:0002616!1.35e-07!59;UBERON:0001049!1.86e-07!57;UBERON:0005068!1.86e-07!57;UBERON:0006241!1.86e-07!57;UBERON:0007135!1.86e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;5.78e-10;1!UBERON:0002146;5.78e-10;1!UBERON:0001961;5.78e-10;1!UBERON:0001744;5.78e-10;1!UBERON:0005623;5.78e-10;1!UBERON:0001042;5.78e-10;1!UBERON:0001735;5.78e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,6.33e-10,1;UBERON:0005623,6.33e-10,1;UBERON:0002372,1.17e-09,1;UBERON:0001961,1.17e-09,1;UBERON:0001744,1.17e-09,1;UBERON:0001735,1.17e-09,1 | |||
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| ||
|short_description=p48@FOXP1 | |||
}} | }} |
Latest revision as of 13:09, 19 September 2015
Short description: | p48@FOXP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_48_at_FOXP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001244815_5end |
EntrezGene: | FOXP1 |
HGNC: | 3823 |
UniProt: | E9PFD3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 6.91e-10 | 1 |
lymphocyte | 1.19e-09 | 53 |
common lymphoid progenitor | 1.19e-09 | 53 |
lymphocyte of B lineage | 3.96e-09 | 24 |
pro-B cell | 3.96e-09 | 24 |
mast cell | 6.31e-08 | 5 |
basophil mast progenitor cell | 6.31e-08 | 5 |
lymphoid lineage restricted progenitor cell | 1.34e-07 | 52 |
CD4-positive, alpha-beta T cell | 8.39e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 6.33e-10 | 1 |
semi-lunar valve | 6.33e-10 | 1 |
tonsil | 1.17e-09 | 1 |
mucosa-associated lymphoid tissue | 1.17e-09 | 1 |
lymphoid tissue | 1.17e-09 | 1 |
tonsillar ring | 1.17e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 4.06e-10 | 1 |
bone marrow cancer | 5.79e-10 | 1 |
myeloma | 5.79e-10 | 1 |