FFCP PHASE1:Hg19::chr3:111717600..111717609,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29114 | |EntrezGene=29114 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29868 | |HGNC=29868 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UI15 | |UniProt=Q9UI15 | ||
|association_with_transcript=14bp_to_ENST00000393917,NM_001008272,NM_013259,uc003dyl.2,uc003dym.2,uc003dyn.2_5end | |association_with_transcript=14bp_to_ENST00000393917,NM_001008272,NM_013259,uc003dyl.2,uc003dym.2,uc003dyn.2_5end | ||
|cluster_id=chr3:111717600..111717609,+ | |||
|description=CAGE_peak_7_at_TAGLN3_5end | |description=CAGE_peak_7_at_TAGLN3_5end | ||
|id=chr3:111717600..111717609,+ | |id=chr3:111717600..111717609,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002553;5.06e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,4.51e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.99e-12;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.29e-73!57;UBERON:0005068!4.29e-73!57;UBERON:0006241!4.29e-73!57;UBERON:0007135!4.29e-73!57;UBERON:0002616!2.51e-63!59;UBERON:0001017!6.63e-63!82;UBERON:0000073!1.95e-62!94;UBERON:0001016!1.95e-62!94;UBERON:0005743!6.72e-62!86;UBERON:0000955!6.98e-61!69;UBERON:0006238!6.98e-61!69;UBERON:0002780!1.26e-57!41;UBERON:0001890!1.26e-57!41;UBERON:0006240!1.26e-57!41;UBERON:0003080!4.75e-56!42;UBERON:0003075!6.98e-54!86;UBERON:0007284!6.98e-54!86;UBERON:0002346!6.51e-51!90;UBERON:0001893!8.56e-47!34;UBERON:0002020!9.96e-47!34;UBERON:0003528!9.96e-47!34;UBERON:0001869!1.74e-46!32;UBERON:0001950!6.48e-46!20;UBERON:0002619!1.65e-45!22;UBERON:0002791!1.66e-44!33;UBERON:0003056!1.69e-40!61;UBERON:0000956!1.64e-39!25;UBERON:0000203!1.64e-39!25;UBERON:0000033!7.51e-34!123;UBERON:0007023!2.27e-32!115;UBERON:0000153!1.10e-31!129;UBERON:0007811!1.10e-31!129;UBERON:0004121!1.65e-31!169;UBERON:0000924!1.88e-30!173;UBERON:0006601!1.88e-30!173;UBERON:0000025!5.77e-20!194;UBERON:0003076!2.28e-17!15;UBERON:0003057!2.28e-17!15;UBERON:0000200!7.42e-16!6;UBERON:0001871!2.06e-15!7;UBERON:0004733!9.56e-15!12;UBERON:0002028!9.56e-15!12;UBERON:0007277!9.56e-15!12;UBERON:0000483!2.61e-14!309;UBERON:0004111!2.77e-14!241;UBERON:0000119!4.98e-14!312;UBERON:0001872!1.47e-13!5;UBERON:0004732!1.80e-13!13;UBERON:0002021!4.03e-13!5;UBERON:0001894!5.19e-12!7;UBERON:0006222!5.19e-12!7;UBERON:0000475!7.21e-12!365;UBERON:0000477!2.08e-11!286;UBERON:0002298!1.47e-10!8;UBERON:0000064!1.26e-09!219;UBERON:0002680!3.11e-09!9;UBERON:0001895!3.11e-09!9;UBERON:0010092!3.11e-09!9;UBERON:0002420!3.26e-09!9;UBERON:0007245!3.26e-09!9;UBERON:0010009!3.26e-09!9;UBERON:0010011!3.26e-09!9;UBERON:0000454!3.26e-09!9;UBERON:0002308!4.69e-09!9;UBERON:0000125!4.69e-09!9;UBERON:0002771!1.82e-08!3;UBERON:0000349!2.57e-08!5;UBERON:0000988!2.78e-08!3;UBERON:0000481!5.38e-08!347;UBERON:0001896!9.83e-08!3;UBERON:0005290!9.83e-08!3;UBERON:0010096!9.83e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.06e-65;20!UBERON:0002619;3.68e-59;22!UBERON:0000956;6.09e-52;25!UBERON:0000203;6.09e-52;25!UBERON:0001869;2.68e-48;32!UBERON:0001893;6.55e-46;34!UBERON:0002791;1.95e-42;32!UBERON:0003528;1.40e-37;34!UBERON:0002020;1.40e-37;34!UBERON:0002780;2.27e-35;41!UBERON:0001890;2.27e-35;41!UBERON:0001872;3.62e-28;5!UBERON:0000073;1.06e-24;53!UBERON:0002616;1.06e-24;53!UBERON:0000200;2.26e-23;6!UBERON:0001017;7.76e-21;75!UBERON:0000955;3.56e-20;68!UBERON:0001870;1.40e-17;3!UBERON:0001016;5.50e-16;83!UBERON:0001871;5.63e-13;6!UBERON:0002702;2.87e-12;2!UBERON:0002021;7.00e-11;5!UBERON:0011216;8.94e-08;132!UBERON:0007023;1.27e-07;114!UBERON:0002581;3.08e-07;1!UBERON:0002902;3.08e-07;1!UBERON:0009899;3.08e-07;1!UBERON:0001882;5.06e-07;1!UBERON:0002022;5.06e-07;1!UBERON:0003112;5.06e-07;1!UBERON:0011158;5.06e-07;1!UBERON:0007190;5.06e-07;1!UBERON:0003128;5.06e-07;1!UBERON:0005403;5.06e-07;1!UBERON:0001703;5.06e-07;1!UBERON:0002241;5.06e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,5.07e-65,20;UBERON:0002619,4.51e-59,22;UBERON:0000956,7.29e-52,25;UBERON:0000203,7.29e-52,25;UBERON:0001869,3.28e-51,32;UBERON:0002780,8.16e-49,41;UBERON:0001890,8.16e-49,41;UBERON:0003080,8.16e-49,41;UBERON:0006240,8.16e-49,41;UBERON:0001893,4.61e-48,34;UBERON:0002791,1.76e-45,32;UBERON:0001017,9.93e-44,81;UBERON:0003528,1.13e-42,34;UBERON:0002020,1.13e-42,34;UBERON:0001049,1.34e-42,56;UBERON:0005068,1.34e-42,56;UBERON:0006241,1.34e-42,56;UBERON:0007135,1.34e-42,56;UBERON:0001016,3.45e-42,89;UBERON:0000955,4.02e-41,68;UBERON:0006238,4.02e-41,68;UBERON:0000073,4.47e-41,53;UBERON:0002616,4.47e-41,53;UBERON:0003056,1.13e-31,61;UBERON:0001872,5.71e-28,5;UBERON:0003075,8.91e-28,82;UBERON:0007284,8.91e-28,82;UBERON:0002346,2.78e-26,86;UBERON:0000200,1.49e-23,6;UBERON:0010371,5.76e-21,104;UBERON:0004121,1.26e-19,171;UBERON:0000924,1.26e-19,171;UBERON:0006601,1.26e-19,171;UBERON:0011216,2.68e-19,223;UBERON:0007023,3.92e-19,114;UBERON:0001870,1.21e-17,3;UBERON:0010314,2.87e-17,132;UBERON:0001871,4.75e-13,6;UBERON:0000025,7.83e-13,192;UBERON:0002702,2.10e-12,2;UBERON:0002021,7.01e-11,5;UBERON:0004111,3.08e-09,240;UBERON:0002581,3.17e-07,1;UBERON:0002902,3.36e-07,1;UBERON:0009899,3.36e-07,1;UBERON:0007190,5.37e-07,1;UBERON:0003112,5.69e-07,1;UBERON:0011158,5.69e-07,1;UBERON:0003128,5.69e-07,1;UBERON:0001703,5.69e-07,1;UBERON:0002241,5.69e-07,1;UBERON:0004761,5.69e-07,1;UBERON:0009617,5.69e-07,1;UBERON:0001882,6.38e-07,1;UBERON:0005403,6.38e-07,1;UBERON:0002022,6.76e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84267891867784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0,0,0,0,0,0.0852266274161009,0.267096106940212,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.54736358051564,0,0,0,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,4.84666373047609,1.85536196323703,3.99227596002388,0,0,0,0,0,0,1.72371686620732,0,0.520874984799877,0,0.723578631752448,0,0.884634079449797,0.591095237907095,2.85201016300164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,1.1713222286267,0,0,0,0,0,3.0607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12990370390266,0,0,2.21587785845575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,2.12623448303086,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.646414781807753,0.92562821219883,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,3.54427271986794,1.83039397352945,1.752673029891,0.573409195690071,0.776503360757966,0.496771223531068,0,0,0,0,0.235265819698172,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42999305476938,0.431299245586727,0,0.327628914576042,0,0,0,0,0,0,2.40171224485641,0,0,2.18379365327962,1.41696576325585,0.798169295285756,3.48697819209284,0.756215088665154,3.1120763608898,2.26065903884592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36381546164381,4.68646859168308,1.03343398250592,2.91712726891971,1.09394961803644,0,0,0,0,0.535701835878287,0,1.21393120847326,0.455324382702595,0,0,0,2.37894065418911,3.42018422526815,0,0,0,0.314231179832004,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.7538341071002,0,0,6.81631203821661,1.05673990496671,0,0,1.41095188908457,0,0,0.785233868459781,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0,0,2.37970215668201,0.872701380680755,0.5290268405154,0,0,0,0.252332849670158,0,0,0,0,0,0,0,0,0.829169439458779,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84267891867784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0,0,0,0,0,0.0852266274161009,0.267096106940212,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.54736358051564,0,0,0,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,4.84666373047609,1.85536196323703,3.99227596002388,0,0,0,0,0,0,1.72371686620732,0,0.520874984799877,0,0.723578631752448,0,0.884634079449797,0.591095237907095,2.85201016300164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,1.1713222286267,0,0,0,0,0,3.0607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12990370390266,0,0,2.21587785845575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,2.12623448303086,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.646414781807753,0.92562821219883,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,3.54427271986794,1.83039397352945,1.752673029891,0.573409195690071,0.776503360757966,0.496771223531068,0,0,0,0,0.235265819698172,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42999305476938,0.431299245586727,0,0.327628914576042,0,0,0,0,0,0,2.40171224485641,0,0,2.18379365327962,1.41696576325585,0.798169295285756,3.48697819209284,0.756215088665154,3.1120763608898,2.26065903884592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36381546164381,4.68646859168308,1.03343398250592,2.91712726891971,1.09394961803644,0,0,0,0,0.535701835878287,0,1.21393120847326,0.455324382702595,0,0,0,2.37894065418911,3.42018422526815,0,0,0,0.314231179832004,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.7538341071002,0,0,6.81631203821661,1.05673990496671,0,0,1.41095188908457,0,0,0.785233868459781,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0,0,2.37970215668201,0.872701380680755,0.5290268405154,0,0,0,0.252332849670158,0,0,0,0,0,0,0,0,0.829169439458779,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@TAGLN3 | |short_description=p7@TAGLN3 | ||
}} | }} |
Latest revision as of 13:07, 19 September 2015
Short description: | p7@TAGLN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TAGLN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000393917, NM_001008272, NM_013259, uc003dyl.2, uc003dym.2, uc003dyn.2_5end |
EntrezGene: | TAGLN3 |
HGNC: | 29868 |
UniProt: | Q9UI15 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 4.51e-07 | 1 |