FFCP PHASE1:Hg19::chr19:5131173..5131200,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23030 | |EntrezGene=23030 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29136 | |HGNC=29136 | ||
|TSSclassifier=strong | |||
|UniProt=O94953 | |UniProt=O94953 | ||
|association_with_transcript=-28bp_to_AL133622_5end | |association_with_transcript=-28bp_to_AL133622_5end | ||
|cluster_id=chr19:5131173..5131200,+ | |||
|coexpression_cluster_id=C2499 | |coexpression_cluster_id=C2499 | ||
|description=CAGE_peak_2_at_KDM4B_5end | |description=CAGE_peak_2_at_KDM4B_5end | ||
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|ontology_enrichment_celltype=CL:0000945!8.00e-27!24;CL:0000826!8.00e-27!24;CL:0000738!2.26e-20!140;CL:0000037!4.76e-20!172;CL:0000566!4.76e-20!172;CL:0000988!1.06e-18!182;CL:0000236!1.17e-18!14;CL:0002032!3.41e-17!165;CL:0000837!3.41e-17!165;CL:0000542!3.47e-16!53;CL:0000051!3.47e-16!53;CL:0002087!2.01e-15!119;CL:0000838!3.66e-15!52;CL:0002031!4.81e-15!124;CL:0002274!3.08e-07!5;CL:0000457!3.08e-07!5;CL:0002191!3.08e-07!5;CL:0000097!3.08e-07!5;CL:0000831!3.08e-07!5;CL:0002028!3.08e-07!5 | |ontology_enrichment_celltype=CL:0000945!8.00e-27!24;CL:0000826!8.00e-27!24;CL:0000738!2.26e-20!140;CL:0000037!4.76e-20!172;CL:0000566!4.76e-20!172;CL:0000988!1.06e-18!182;CL:0000236!1.17e-18!14;CL:0002032!3.41e-17!165;CL:0000837!3.41e-17!165;CL:0000542!3.47e-16!53;CL:0000051!3.47e-16!53;CL:0002087!2.01e-15!119;CL:0000838!3.66e-15!52;CL:0002031!4.81e-15!124;CL:0002274!3.08e-07!5;CL:0000457!3.08e-07!5;CL:0002191!3.08e-07!5;CL:0000097!3.08e-07!5;CL:0000831!3.08e-07!5;CL:0002028!3.08e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.31e-52;24!CL:0000236;6.57e-34;13!CL:0000542;4.19e-17;53!CL:0000451;9.90e-08;10 | |ontology_enrichment_celltype_v019=CL:0000945;1.31e-52;24!CL:0000236;6.57e-34;13!CL:0000542;4.19e-17;53!CL:0000451;9.90e-08;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.19e-52,24;CL:0000826,1.19e-52,24;CL:0000236,3.09e-37,14;CL:0000542,3.58e-26,53;CL:0000051,3.58e-26,53;CL:0000838,4.55e-24,52;CL:0000037,1.24e-16,168;CL:0000738,1.69e-16,136;CL:0000988,2.27e-15,177;CL:0002032,2.69e-15,161;CL:0000837,2.69e-15,161;CL:0002087,5.02e-15,115;CL:0002031,5.01e-14,120;CL:0000451,1.13e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000051;4.19e-17;53 | |ontology_enrichment_development_v019=CL:0000051;4.19e-17;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.57e-10!15;UBERON:0000179!1.57e-10!15;UBERON:0000463!1.57e-10!15;UBERON:0002390!5.01e-09!102;UBERON:0003061!5.01e-09!102;UBERON:0002193!8.14e-09!112;UBERON:0007023!3.09e-08!115 | |ontology_enrichment_uberon=UBERON:0000178!1.57e-10!15;UBERON:0000179!1.57e-10!15;UBERON:0000463!1.57e-10!15;UBERON:0002390!5.01e-09!102;UBERON:0003061!5.01e-09!102;UBERON:0002193!8.14e-09!112;UBERON:0007023!3.09e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.51e-13;15!UBERON:0000179;1.51e-13;15!UBERON:0000463;1.51e-13;15!UBERON:0002390;1.20e-08;32!UBERON:0002193;4.64e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.51e-13;15!UBERON:0000179;1.51e-13;15!UBERON:0000463;1.51e-13;15!UBERON:0002390;1.20e-08;32!UBERON:0002193;4.64e-07;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.50e-13,15;UBERON:0000179,1.50e-13,15;UBERON:0000463,1.50e-13,15 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,22.7711949128895,21.5103544358858,24.4790529885542,0,0.383829398097213,0.154816123316076,0,0,0,2.78881922089086,0.710846162437108,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0.28769239232215,0,0,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0,0.918251677112708,0.641858054152187,0,0,0,0,0,0,0,0,1.0429658368404,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0.19891667719909,0,22.879511779972,18.0225741716503,16.9006758234075,16.6424786800938,20.8205913258726,21.8405927182704,22.4755256746853,8.58648379081828,26.1837965790346,21.1405388173538,16.0554755812596,0,2.80254281490768,0,0,0,0,1.33749196312542,0,0.946895611469467,0,0.111410456885174,0.294605907474837,0,1.35401931882508,0.128091319725675,0.780356085359269,0,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,3.24547393654683,4.70150290708022,5.05240249971688,0.953962497221368,1.14398982156026,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17002132569619,0,0,0,0,0,0,0,0.492663237895943,1.05658120815871,0.829312462163088,0.432359860250884,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.431255149719035,0,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.533637789017222,0,0,0,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,1.52927441428475,1.13929437434833,3.09701308095126,5.75907182320672,1.94541993357815,5.40031437238115,4.75875105776562,0,0,0,10.2191746319145,0.144269212976445,4.62421981764692,0,23.3507864576395,0,0,0.324621940274555,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,63.19820147422,0,0,1.6653598399891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,5.24939439509181,0,0,1.6001024709939,0,0,0,1.02314474045374,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0.470940769185074,0,0,0,0.167821586975843,0,0,0.210998064528027,0,0,0,1.99052386215701,0.265372693510018,1.22206028986725,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.678923115418936,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.209818352539992,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0.828478110694391,3.96932817449561,0,2.67943716437971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,6.45310330312364,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0.218559560503957,0,0,0,0,0,0,0,7.04879384848902,7.92832022074999,0,0,0,0,0,1.83491713361816,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,4.16782840200317,2.41167717140561,0,0,0,0,0.904244737704086,0.744896571550295,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,5.79227655925453,0.358611026963382,0,0,0,0,0,0,0,0.813792356631477,0,7.84967795005002,22.1192259689231 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| ||
|short_description=p2@KDM4B | |short_description=p2@KDM4B | ||
}} | }} |
Latest revision as of 13:01, 19 September 2015
Short description: | p2@KDM4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KDM4B_5end |
Coexpression cluster: | C2499_acute_CD19_B_xeroderma_spleen_vein_plasma |
Association with transcript: | -28bp_to_AL133622_5end |
EntrezGene: | KDM4B |
HGNC: | 29136 |
UniProt: | O94953 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.19e-52 | 24 |
pro-B cell | 1.19e-52 | 24 |
B cell | 3.09e-37 | 14 |
lymphocyte | 3.58e-26 | 53 |
common lymphoid progenitor | 3.58e-26 | 53 |
lymphoid lineage restricted progenitor cell | 4.55e-24 | 52 |
hematopoietic stem cell | 1.24e-16 | 168 |
leukocyte | 1.69e-16 | 136 |
hematopoietic cell | 2.27e-15 | 177 |
hematopoietic oligopotent progenitor cell | 2.69e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.69e-15 | 161 |
nongranular leukocyte | 5.02e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 5.01e-14 | 120 |
dendritic cell | 1.13e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
blood | 1.50e-13 | 15 |
haemolymphatic fluid | 1.50e-13 | 15 |
organism substance | 1.50e-13 | 15 |