FFCP PHASE1:Hg19::chr3:111393542..111393579,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=257068 | |EntrezGene=257068 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26462 | |HGNC=26462 | ||
|TSSclassifier=strong | |||
|UniProt=Q0VAA5 | |UniProt=Q0VAA5 | ||
|association_with_transcript=19bp_to_ENST00000393934,NM_001185106,NM_153268_5end | |association_with_transcript=19bp_to_ENST00000393934,NM_001185106,NM_153268_5end | ||
|cluster_id=chr3:111393542..111393579,+ | |||
|coexpression_cluster_id=C1760 | |coexpression_cluster_id=C1760 | ||
|description=CAGE_peak_1_at_PLCXD2_5end | |description=CAGE_peak_1_at_PLCXD2_5end | ||
|id=chr3:111393542..111393579,+ | |id=chr3:111393542..111393579,+ | ||
|ontology_enrichment_celltype=CL:0000791!7.05e-11!18;CL:0000789!7.05e-11!18;CL:0002420!7.05e-11!18;CL:0002419!7.05e-11!18;CL:0000790!7.05e-11!18;CL:0000084!4.77e-09!25;CL:0000827!4.77e-09!25;CL:0000625!1.47e-07!11 | |ontology_enrichment_celltype=CL:0000791!7.05e-11!18;CL:0000789!7.05e-11!18;CL:0002420!7.05e-11!18;CL:0002419!7.05e-11!18;CL:0000790!7.05e-11!18;CL:0000084!4.77e-09!25;CL:0000827!4.77e-09!25;CL:0000625!1.47e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.31e-14;18!CL:0000789;2.31e-14;18!CL:0002419;2.31e-14;18!CL:0000084;7.24e-11;25!CL:0000625;5.81e-10;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.02e-14,18;CL:0000789,1.02e-14,18;CL:0002420,1.02e-14,18;CL:0002419,1.02e-14,18;CL:0000790,1.02e-14,18;CL:0000084,4.05e-11,25;CL:0000827,4.05e-11,25;CL:0000625,4.89e-10,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.31e-14;18 | |||
|ontology_enrichment_disease=DOID:305!7.86e-07!106 | |ontology_enrichment_disease=DOID:305!7.86e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.24e-15!86;UBERON:0001017!5.57e-15!82;UBERON:0001049!1.10e-13!57;UBERON:0005068!1.10e-13!57;UBERON:0006241!1.10e-13!57;UBERON:0007135!1.10e-13!57;UBERON:0000073!1.80e-13!94;UBERON:0001016!1.80e-13!94;UBERON:0002619!1.89e-12!22;UBERON:0000955!4.34e-12!69;UBERON:0006238!4.34e-12!69;UBERON:0001950!7.42e-12!20;UBERON:0002616!1.35e-11!59;UBERON:0001869!3.32e-11!32;UBERON:0002780!5.99e-11!41;UBERON:0001890!5.99e-11!41;UBERON:0006240!5.99e-11!41;UBERON:0002020!6.07e-11!34;UBERON:0003528!6.07e-11!34;UBERON:0000956!8.42e-11!25;UBERON:0000203!8.42e-11!25;UBERON:0001893!1.08e-10!34;UBERON:0003080!3.26e-10!42;UBERON:0002791!3.39e-10!33;UBERON:0000153!7.91e-10!129;UBERON:0007811!7.91e-10!129;UBERON:0000033!8.91e-09!123;UBERON:0003075!1.21e-08!86;UBERON:0007284!1.21e-08!86;UBERON:0004121!2.95e-08!169;UBERON:0003056!8.02e-08!61;UBERON:0002346!9.30e-08!90;UBERON:0000924!1.11e-07!173;UBERON:0006601!1.11e-07!173 | |ontology_enrichment_uberon=UBERON:0005743!1.24e-15!86;UBERON:0001017!5.57e-15!82;UBERON:0001049!1.10e-13!57;UBERON:0005068!1.10e-13!57;UBERON:0006241!1.10e-13!57;UBERON:0007135!1.10e-13!57;UBERON:0000073!1.80e-13!94;UBERON:0001016!1.80e-13!94;UBERON:0002619!1.89e-12!22;UBERON:0000955!4.34e-12!69;UBERON:0006238!4.34e-12!69;UBERON:0001950!7.42e-12!20;UBERON:0002616!1.35e-11!59;UBERON:0001869!3.32e-11!32;UBERON:0002780!5.99e-11!41;UBERON:0001890!5.99e-11!41;UBERON:0006240!5.99e-11!41;UBERON:0002020!6.07e-11!34;UBERON:0003528!6.07e-11!34;UBERON:0000956!8.42e-11!25;UBERON:0000203!8.42e-11!25;UBERON:0001893!1.08e-10!34;UBERON:0003080!3.26e-10!42;UBERON:0002791!3.39e-10!33;UBERON:0000153!7.91e-10!129;UBERON:0007811!7.91e-10!129;UBERON:0000033!8.91e-09!123;UBERON:0003075!1.21e-08!86;UBERON:0007284!1.21e-08!86;UBERON:0004121!2.95e-08!169;UBERON:0003056!8.02e-08!61;UBERON:0002346!9.30e-08!90;UBERON:0000924!1.11e-07!173;UBERON:0006601!1.11e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.50e-17;22!UBERON:0001950;4.62e-16;20!UBERON:0000956;6.08e-14;25!UBERON:0000203;6.08e-14;25!UBERON:0001869;2.99e-11;32!UBERON:0003528;1.32e-10;34!UBERON:0002020;1.32e-10;34!UBERON:0002791;6.27e-10;32!UBERON:0001893;8.25e-10;34!UBERON:0000073;3.24e-08;53!UBERON:0002616;3.24e-08;53!UBERON:0002780;3.36e-08;41!UBERON:0001890;3.36e-08;41 | |||
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| ||
|short_description=p1@PLCXD2 | |short_description=p1@PLCXD2 | ||
}} | }} |
Latest revision as of 12:45, 19 September 2015
Short description: | p1@PLCXD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLCXD2_5end |
Coexpression cluster: | C1760_brain_occipital_temporal_duodenum_parietal_medulloblastoma_myeloma |
Association with transcript: | 19bp_to_ENST00000393934, NM_001185106, NM_153268_5end |
EntrezGene: | PLCXD2 |
HGNC: | 26462 |
UniProt: | Q0VAA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.02e-14 | 18 |
alpha-beta T cell | 1.02e-14 | 18 |
immature T cell | 1.02e-14 | 18 |
mature T cell | 1.02e-14 | 18 |
immature alpha-beta T cell | 1.02e-14 | 18 |
T cell | 4.05e-11 | 25 |
pro-T cell | 4.05e-11 | 25 |
CD8-positive, alpha-beta T cell | 4.89e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 6.11e-17 | 22 |
neocortex | 4.22e-16 | 20 |
neural tube | 7.84e-15 | 56 |
neural rod | 7.84e-15 | 56 |
future spinal cord | 7.84e-15 | 56 |
neural keel | 7.84e-15 | 56 |
central nervous system | 2.27e-14 | 81 |
regional part of nervous system | 3.24e-14 | 53 |
regional part of brain | 3.24e-14 | 53 |
cerebral cortex | 6.61e-14 | 25 |
pallium | 6.61e-14 | 25 |
nervous system | 1.09e-12 | 89 |
brain | 1.53e-12 | 68 |
future brain | 1.53e-12 | 68 |
cerebral hemisphere | 2.40e-12 | 32 |
brain grey matter | 6.35e-12 | 34 |
gray matter | 6.35e-12 | 34 |
regional part of forebrain | 3.91e-11 | 41 |
forebrain | 3.91e-11 | 41 |
anterior neural tube | 3.91e-11 | 41 |
future forebrain | 3.91e-11 | 41 |
telencephalon | 4.32e-11 | 34 |
regional part of telencephalon | 4.91e-11 | 32 |
neural plate | 1.63e-10 | 82 |
presumptive neural plate | 1.63e-10 | 82 |
ecto-epithelium | 7.14e-10 | 104 |
neurectoderm | 8.87e-10 | 86 |
organ system subdivision | 4.72e-09 | 223 |
pre-chordal neural plate | 1.52e-08 | 61 |
ectoderm-derived structure | 5.75e-08 | 171 |
ectoderm | 5.75e-08 | 171 |
presumptive ectoderm | 5.75e-08 | 171 |