FFCP PHASE1:Hg19::chr8:94930100..94930120,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54704 | |EntrezGene=54704 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9279 | |HGNC=9279 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=125bp_to_ENST00000517764_5end | |association_with_transcript=125bp_to_ENST00000517764_5end | ||
|cluster_id=chr8:94930100..94930120,+ | |||
|coexpression_cluster_id=C2932 | |coexpression_cluster_id=C2932 | ||
|description=CAGE_peak_5_at_PDP1_5end | |description=CAGE_peak_5_at_PDP1_5end | ||
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|ontology_enrichment_celltype=CL:0002319!8.36e-08!25 | |ontology_enrichment_celltype=CL:0002319!8.36e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;5.14e-10;25!CL:1000306;6.31e-07;4!CL:0002547;6.31e-07;4 | |ontology_enrichment_celltype_v019=CL:0002319;5.14e-10;25!CL:1000306;6.31e-07;4!CL:0002547;6.31e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.23e-10,25;CL:0000095,9.41e-07,17;CL:0000123,9.41e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.05e-09;82 | |ontology_enrichment_development_v019=UBERON:0006601;2.05e-09;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1749;4.00e-10;14 | |ontology_enrichment_disease_v019=DOID:1749;4.00e-10;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,1.64e-10,14 | |||
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| ||
|short_description=p5@PDP1 | |short_description=p5@PDP1 | ||
}} | }} |
Latest revision as of 12:43, 19 September 2015
Short description: | p5@PDP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PDP1_5end |
Coexpression cluster: | C2932_occipital_astrocytoma_gall_medial_postcentral_parietal_brain |
Association with transcript: | 125bp_to_ENST00000517764_5end |
EntrezGene: | PDP1 |
HGNC: | 9279 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.23e-10 | 25 |
neuron associated cell | 9.41e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 9.41e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.64e-10 | 14 |