FFCP PHASE1:Hg19::chr8:94929969..94929980,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54704 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9279 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000517764_5end | |||
|cluster_id=chr8:94929969..94929980,+ | |||
|coexpression_cluster_id=C2932 | |||
|description=CAGE_peak_8_at_PDP1_5end | |||
|id=chr8:94929969..94929980,+ | |||
|ontology_enrichment_celltype=CL:0002319!3.05e-08!25;CL:0000128!8.84e-08!7;CL:0000126!8.84e-08!7;CL:0000127!8.84e-08!7;CL:0002453!8.84e-08!7;CL:0000095!4.07e-07!17;CL:0000123!4.07e-07!17;CL:0002321!4.11e-07!248;CL:0000243!4.15e-07!15;CL:0000125!4.15e-07!15;CL:0000030!4.15e-07!15;CL:0000339!4.15e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000128;7.39e-18;7!CL:0000126;7.39e-18;7!CL:0000127;7.39e-18;7!CL:0000243;2.74e-12;15!CL:0000125;2.74e-12;15!CL:0002605;2.74e-11;3!CL:0000095;7.53e-11;17!CL:0002319;4.31e-09;25!CL:0000306;1.24e-08;4!CL:0002222;1.24e-08;4!CL:0002224;1.24e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.19e-17,7;CL:0000126,1.19e-17,7;CL:0000127,1.19e-17,7;CL:0002453,1.19e-17,7;CL:0000243,3.58e-12,15;CL:0000125,3.58e-12,15;CL:0000030,3.58e-12,15;CL:0000339,3.58e-12,15;CL:0002605,2.36e-11,3;CL:0000095,9.53e-11,17;CL:0000123,9.53e-11,17;CL:0002319,6.19e-09,25;CL:0000306,1.42e-08,4;CL:0002222,1.42e-08,4;CL:0002224,1.42e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000339;2.74e-12;15 | |||
|ontology_enrichment_disease=DOID:1749!5.01e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.72e-27!82;UBERON:0000955!2.39e-26!69;UBERON:0006238!2.39e-26!69;UBERON:0003075!3.61e-25!86;UBERON:0007284!3.61e-25!86;UBERON:0002616!6.16e-25!59;UBERON:0005743!7.91e-25!86;UBERON:0001049!9.07e-25!57;UBERON:0005068!9.07e-25!57;UBERON:0006241!9.07e-25!57;UBERON:0007135!9.07e-25!57;UBERON:0002346!2.08e-24!90;UBERON:0000033!1.48e-23!123;UBERON:0001869!1.49e-23!32;UBERON:0000073!5.18e-23!94;UBERON:0001016!5.18e-23!94;UBERON:0002780!5.76e-23!41;UBERON:0001890!5.76e-23!41;UBERON:0006240!5.76e-23!41;UBERON:0001893!7.03e-23!34;UBERON:0002020!3.29e-22!34;UBERON:0003528!3.29e-22!34;UBERON:0003080!4.13e-22!42;UBERON:0002791!8.00e-22!33;UBERON:0003056!2.16e-21!61;UBERON:0000153!2.54e-21!129;UBERON:0007811!2.54e-21!129;UBERON:0004121!1.14e-19!169;UBERON:0000924!1.84e-19!173;UBERON:0006601!1.84e-19!173;UBERON:0000956!4.70e-19!25;UBERON:0000203!4.70e-19!25;UBERON:0004111!1.02e-18!241;UBERON:0000025!1.11e-18!194;UBERON:0000477!5.01e-17!286;UBERON:0000483!7.35e-17!309;UBERON:0000119!9.19e-17!312;UBERON:0002619!3.88e-16!22;UBERON:0001950!9.19e-15!20;UBERON:0000475!2.81e-14!365;UBERON:0000481!1.37e-11!347;UBERON:0000064!1.62e-10!219;UBERON:0000468!1.35e-09!659;UBERON:0000922!2.81e-09!612;UBERON:0000467!7.62e-09!625;UBERON:0000480!9.46e-09!626;UBERON:0000923!2.27e-08!604;UBERON:0005291!2.27e-08!604;UBERON:0006598!2.27e-08!604;UBERON:0002532!2.27e-08!604;UBERON:0002050!2.80e-08!605;UBERON:0005423!2.80e-08!605;UBERON:0000200!6.92e-08!6;UBERON:0002049!2.22e-07!79;UBERON:0007798!2.22e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.01e-42;32!UBERON:0000956;5.78e-41;25!UBERON:0000203;5.78e-41;25!UBERON:0001893;2.93e-40;34!UBERON:0002791;1.19e-38;32!UBERON:0003528;3.45e-36;34!UBERON:0002020;3.45e-36;34!UBERON:0001950;9.53e-36;20!UBERON:0002619;2.63e-32;22!UBERON:0002780;3.63e-25;41!UBERON:0001890;3.63e-25;41!UBERON:0000200;7.36e-22;6!UBERON:0000073;5.29e-19;53!UBERON:0002616;5.29e-19;53!UBERON:0000955;6.85e-17;68!UBERON:0001017;4.11e-16;75!UBERON:0001872;3.80e-12;5!UBERON:0002021;9.65e-12;5!UBERON:0001870;1.21e-11;3!UBERON:0001016;2.13e-10;83!UBERON:0010077;1.24e-08;4!UBERON:0005389;1.24e-08;4!UBERON:0000484;1.24e-08;4!UBERON:0000965;1.24e-08;4!UBERON:0001803;1.24e-08;4!UBERON:0002771;2.97e-08;2!UBERON:0002702;2.97e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.00e-47,32;UBERON:0001893,1.17e-44,34;UBERON:0002791,4.52e-43,32;UBERON:0000956,5.17e-41,25;UBERON:0000203,5.17e-41,25;UBERON:0003528,2.74e-40,34;UBERON:0002020,2.74e-40,34;UBERON:0002780,1.24e-39,41;UBERON:0001890,1.24e-39,41;UBERON:0003080,1.24e-39,41;UBERON:0006240,1.24e-39,41;UBERON:0001950,9.45e-36,20;UBERON:0003056,2.03e-35,61;UBERON:0000073,4.97e-35,53;UBERON:0002616,4.97e-35,53;UBERON:0000955,2.73e-33,68;UBERON:0006238,2.73e-33,68;UBERON:0001049,7.72e-33,56;UBERON:0005068,7.72e-33,56;UBERON:0006241,7.72e-33,56;UBERON:0007135,7.72e-33,56;UBERON:0002619,2.61e-32,22;UBERON:0001016,4.96e-32,89;UBERON:0001017,2.36e-31,81;UBERON:0002346,2.59e-29,86;UBERON:0003075,8.33e-29,82;UBERON:0007284,8.33e-29,82;UBERON:0004121,5.39e-22,171;UBERON:0000924,5.39e-22,171;UBERON:0006601,5.39e-22,171;UBERON:0000200,6.73e-22,6;UBERON:0010371,3.29e-21,104;UBERON:0010314,1.60e-19,132;UBERON:0000025,7.68e-14,192;UBERON:0011216,1.32e-13,223;UBERON:0001872,2.64e-12,5;UBERON:0002021,1.00e-11,5;UBERON:0001870,1.54e-11,3;UBERON:0004111,3.75e-11,240;UBERON:0007023,4.50e-11,114;UBERON:0000483,1.12e-09,306;UBERON:0000119,1.72e-09,309;UBERON:0010077,1.42e-08,4;UBERON:0005389,1.42e-08,4;UBERON:0000484,1.42e-08,4;UBERON:0002546,1.42e-08,4;UBERON:0000965,1.42e-08,4;UBERON:0001803,1.42e-08,4;UBERON:0003073,1.42e-08,4;UBERON:0005426,1.42e-08,4;UBERON:0002771,2.68e-08,2;UBERON:0002702,3.33e-08,2;UBERON:0000923,5.70e-07,560;UBERON:0010316,5.70e-07,560;UBERON:0005291,5.70e-07,560;UBERON:0006598,5.70e-07,560;UBERON:0010317,5.70e-07,560;UBERON:0002532,5.70e-07,560;UBERON:0005423,6.66e-07,581;UBERON:0002050,7.74e-07,564 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,1.10808952269109,0.204000691244253,1.25381888591235,1.43117993565528,3.28498620174922,1.38096903554283,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443067789167242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,1.60709189178915,0.221729397462564,0.790513071238134,0.523916301990851,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0.66944122552934,0.805658634218294,0,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,2.78059279707759,1.43418310374407,0.354668382198357,0,0,0.24666754841716,0,0,0,0.605429710579726,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0.286804595389004,0.487894824518382,0.265059536642971,0,0.621966330092223,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.514703430895577,0.219500570817251,0,0,0.0925884451585296,0,0,1.44331342025273,4.28942498407784,0.234817388471643,0,0,0.570762456703795,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0.646358578788889,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,1.00509759200609,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0.601519410909855,0,0.574072240823034,0,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,1.66215201785745,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0,0.62962469366128,0,0.924100740528266,1.06461206063404,0,0.18532421910392,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0,0,0.353437207037059,0,0,0.421258456238981,0,0.731140468893853,0,0,0.565621727814851,0,0,1.32687795048244,0.876901770507525,0,0,1.01455188481352,0.30982349809975,0,0.573645408816206,0,0.35667105148125,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,1.98895302764489,0,0,0,0,0.422008249231538,0.222617410045812,0,0,0.19924798825107,0,0,7.36334514015515,0,0,0.269605053441981,0,0,0.0986434056369336,0,0,2.90799823828566,3.4324196319885,0,0,0,0,0,0.254253650292766,0,0,0,0,0.885741385813839,0.844175070377856,0,0.221158519862449,0,1.97446857438575,0,0.139423744278603,0,0.91153644677601,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.816164040795739,0,0,0,0,0,0,0,0,0.202203398942031,0,1.1713222286267,0,0.391329237864179,0.242780379534093,0,0,0.30607276163049,0,0.150323419414493,0,0,0.330991955875499,0.941798755221676,0,0,0,0.173559738335131,0.195984794828755,1.21882889212564,0,0,0,0,0,0,0.0882561266915003,0,0.959293472527256,0.794858446811959,2.21587785845575,0,2.80555870880368,0,0,0,0,0,0,0.869767748958028,0,0.815425236441684,0.523014231561666,0,0.288950589901519,1.20084057741958,0,0,0.429765441419957,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.408610218334727,0,0.275078873194468,0.415440338029185,0.2249738915515,0,2.00473536971481,0,0,0,0,0,1.34340638123612,0,0,0.5085370753095,0,0.864221491201268,0,1.19730191562487,0,0.170388021785422,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0.157054096250234,3.54427271986794,3.05065662254908,1.251909307065,0.573409195690071,0.110929051536852,0.248385611765534,0,0,0.303298235083296,0,0.941063278792687,0,0.579684114443301,0,0,1.10961172300523,0,0,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0,0.449803112163605,0.310525913752519,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,1.54095864325843,0,0,0,0.694567422971502,0.97894681802587,0,0,0,1.23682402162117,0.192914038270915,0.675769762612291,0,0,0,1.52084279766904,0,0,0,0.327609848846413,0,1.69049698686902,0,0,0,0.567515953566836,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66995985250795,1.41696576325585,1.27707087245721,2.87162909937057,0.252071696221718,3.04291910842559,2.26065903884592,0,1.27592034051333,0.943757786781923,0.733714394086716,3.81234698296116,0,0,0,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0.147856086217045,3.44441681553813,3.12431239445539,2.48024155801421,1.71222687523548,0,0,0,1.58284119923659,1.14986184875636,0.535701835878287,0,0,0,0,0,0.685952037749674,0.271878931907327,3.28863867814245,0,0,0,1.88538707899202,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,2.60330401607244,2.30076192849726,0,0,0,0,0,0.588901401691458,0,0,0,0,0,0.233939463462106,0,1.30812099855325,0.67767649223376,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0.357107877211315,0.352894871715692,0.320965466756673,0,0,0,0,3.05961705859116,0,0.5290268405154,0,0.462175628631418,0,0,0.109265571963696,0,0,0.26721740526556,0.0918948995348449,0,0,0,0.829169439458779,0.310298987585686,0,0,0,0,0.224263725161227,0,0,0,0,0,0.215166616178029,0,0.976839223331694,1.60091018816573,0,0,0,0,0,0,0,0 | |||
|short_description=p8@PDP1 | |||
}} |
Latest revision as of 12:41, 19 September 2015
Short description: | p8@PDP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PDP1_5end |
Coexpression cluster: | C2932_occipital_astrocytoma_gall_medial_postcentral_parietal_brain |
Association with transcript: | 0bp_to_ENST00000517764_5end |
EntrezGene: | PDP1 |
HGNC: | 9279 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.19e-17 | 7 |
macroglial cell | 1.19e-17 | 7 |
astrocyte | 1.19e-17 | 7 |
oligodendrocyte precursor cell | 1.19e-17 | 7 |
glial cell (sensu Vertebrata) | 3.58e-12 | 15 |
glial cell | 3.58e-12 | 15 |
glioblast | 3.58e-12 | 15 |
glioblast (sensu Vertebrata) | 3.58e-12 | 15 |
astrocyte of the cerebral cortex | 2.36e-11 | 3 |
neuron associated cell | 9.53e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 9.53e-11 | 17 |
neural cell | 6.19e-09 | 25 |
crystallin accumulating cell | 1.42e-08 | 4 |
vertebrate lens cell | 1.42e-08 | 4 |
lens epithelial cell | 1.42e-08 | 4 |