FFCP PHASE1:Hg19::chr1:85462749..85462760,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:85462749..85462760,- to FFCP PHASE1:Hg19::chr1:85462749..85462760,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=255231 | |EntrezGene=255231 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13357 | |HGNC=13357 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=34bp_to_ENST00000284027_5end | |||
|cluster_id=chr1:85462749..85462760,- | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_3_at_MCOLN2_5end | |||
|id=chr1:85462749..85462760,- | |||
|ontology_enrichment_celltype=CL:0000738!4.72e-31!140;CL:0002087!7.28e-28!119;CL:0002031!3.53e-24!124;CL:0000542!4.53e-24!53;CL:0000051!4.53e-24!53;CL:0000988!3.00e-23!182;CL:0000838!5.04e-23!52;CL:0000037!1.09e-22!172;CL:0000566!1.09e-22!172;CL:0002032!5.46e-20!165;CL:0000837!5.46e-20!165;CL:0000451!5.37e-15!10;CL:0000990!1.75e-12!8;CL:0000084!3.72e-11!25;CL:0000827!3.72e-11!25;CL:0000945!3.20e-10!24;CL:0000826!3.20e-10!24;CL:0000791!9.30e-10!18;CL:0000789!9.30e-10!18;CL:0002420!9.30e-10!18;CL:0002419!9.30e-10!18;CL:0000790!9.30e-10!18;CL:0000625!8.31e-09!11;CL:0000840!1.04e-08!5;CL:0001029!1.04e-08!5;CL:0000453!3.15e-08!5;CL:0000080!4.09e-08!6;CL:0002009!2.65e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.09e-25;24!CL:0000451;5.01e-23;10!CL:0000453;4.83e-21;5!CL:0000542;2.85e-16;53!CL:0000990;2.87e-16;8!CL:0002087;8.30e-14;104!CL:0000784;7.23e-13;3!CL:0000738;2.75e-11;136!CL:0001014;4.64e-10;2!CL:0001016;4.64e-10;2!CL:0000860;7.04e-10;33!CL:0002057;7.04e-10;33!CL:0000840;4.59e-07;5!CL:0000988;7.59e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.76e-46,136;CL:0000988,1.60e-39,177;CL:0002031,1.07e-37,120;CL:0002087,5.99e-37,115;CL:0000037,1.59e-35,168;CL:0002032,2.18e-33,161;CL:0000837,2.18e-33,161;CL:0000542,4.95e-31,53;CL:0000051,4.95e-31,53;CL:0000838,1.04e-28,52;CL:0000945,3.48e-25,24;CL:0000826,3.48e-25,24;CL:0000451,3.86e-23,10;CL:0000453,3.14e-21,5;CL:0000990,2.29e-16,8;CL:0002009,2.19e-13,61;CL:0000784,7.70e-13,3;CL:0000134,4.68e-12,354;CL:0000557,7.06e-12,67;CL:0002320,1.21e-11,361;CL:0000219,5.46e-11,386;CL:0002194,2.87e-10,59;CL:0000576,2.87e-10,59;CL:0000040,2.87e-10,59;CL:0000559,2.87e-10,59;CL:0001014,4.65e-10,2;CL:0001016,4.65e-10,2;CL:0000763,3.66e-09,108;CL:0000049,3.66e-09,108;CL:0000839,7.03e-09,66;CL:0000048,2.05e-08,427;CL:0000785,2.22e-08,2;CL:0000955,2.22e-08,2;CL:0000818,2.22e-08,2;CL:0000954,2.22e-08,2;CL:0000816,2.22e-08,2;CL:0000723,3.61e-08,433;CL:0000860,6.08e-08,42;CL:0002057,6.08e-08,42;CL:0000766,6.61e-08,72;CL:0000034,7.46e-08,441;CL:0000840,4.78e-07,5;CL:0001029,4.78e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000051;2.85e-16;53!CL:0000954;1.39e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!2.33e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.24e-19;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.62e-19,10;DOID:2531,4.97e-09,51;DOID:0060083,4.97e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.97e-08!102;UBERON:0003061!1.97e-08!102;UBERON:0002193!5.51e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.41e-12,98;UBERON:0003061,4.41e-12,98;UBERON:0002384,4.43e-11,371;UBERON:0002193,1.53e-10,108;UBERON:0002371,4.59e-10,76;UBERON:0001474,4.44e-09,82;UBERON:0002405,9.16e-09,93;UBERON:0004765,5.67e-08,90;UBERON:0001434,7.60e-07,100 | |||
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| ||
|short_description=p3@MCOLN2 | |||
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Latest revision as of 12:40, 19 September 2015
Short description: | p3@MCOLN2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MCOLN2_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 34bp_to_ENST00000284027_5end |
EntrezGene: | MCOLN2 |
HGNC: | 13357 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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hematopoietic system | 4.41e-12 | 98 |
blood island | 4.41e-12 | 98 |
connective tissue | 4.43e-11 | 371 |
hemolymphoid system | 1.53e-10 | 108 |
bone marrow | 4.59e-10 | 76 |
bone element | 4.44e-09 | 82 |
immune system | 9.16e-09 | 93 |
skeletal element | 5.67e-08 | 90 |
skeletal system | 7.60e-07 | 100 |
Ontology term | p-value | n |
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lymphoma | 2.62e-19 | 10 |
hematologic cancer | 4.97e-09 | 51 |
immune system cancer | 4.97e-09 | 51 |