FFCP PHASE1:Hg19::chr22:26875345..26875357,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89781 | |EntrezGene=89781 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15844 | |HGNC=15844 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000398141_5end | |association_with_transcript=0bp_to_ENST00000398141_5end | ||
|cluster_id=chr22:26875345..26875357,- | |||
|coexpression_cluster_id=C96 | |coexpression_cluster_id=C96 | ||
|description=CAGE_peak_8_at_HPS4_5end | |description=CAGE_peak_8_at_HPS4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000037!6.55e-09!172;CL:0000566!6.55e-09!172;CL:0000988!4.07e-08!182;CL:0002032!1.19e-07!165;CL:0000837!1.19e-07!165;CL:0000817!6.40e-07!3 | |ontology_enrichment_celltype=CL:0000037!6.55e-09!172;CL:0000566!6.55e-09!172;CL:0000988!4.07e-08!182;CL:0002032!1.19e-07!165;CL:0000837!1.19e-07!165;CL:0000817!6.40e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000817;2.78e-26;1!CL:0002032;3.58e-26;1!CL:0000557;3.58e-26;1!CL:0000785;7.62e-26;1!CL:0000819;7.62e-26;1!CL:0000236;1.26e-08;13 | |ontology_enrichment_celltype_v019=CL:0000817;2.78e-26;1!CL:0002032;3.58e-26;1!CL:0000557;3.58e-26;1!CL:0000785;7.62e-26;1!CL:0000819;7.62e-26;1!CL:0000236;1.26e-08;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000817,4.66e-34,3;CL:0000819,4.61e-26,1;CL:0000785,9.40e-14,2;CL:0000955,9.40e-14,2;CL:0000818,9.40e-14,2;CL:0000954,9.40e-14,2;CL:0000816,9.40e-14,2;CL:0000236,4.19e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000954;1.21e-13;2 | |ontology_enrichment_development_v019=CL:0000954;1.21e-13;2 | ||
|ontology_enrichment_disease=DOID:2531!8.07e-28!51;DOID:0060083!8.07e-28!51;DOID:1240!7.10e-27!39;DOID:8692!1.00e-19!31;DOID:0050686!2.10e-11!137;DOID:162!1.68e-08!235;DOID:14566!3.46e-08!239 | |ontology_enrichment_disease=DOID:2531!8.07e-28!51;DOID:0060083!8.07e-28!51;DOID:1240!7.10e-27!39;DOID:8692!1.00e-19!31;DOID:0050686!2.10e-11!137;DOID:162!1.68e-08!235;DOID:14566!3.46e-08!239 | ||
|ontology_enrichment_disease_v019=DOID:0060073;7.62e-26;1!DOID:8675;7.62e-26;1!DOID:1240;1.77e-10;39!DOID:2531;3.10e-10;51!DOID:0060083;3.10e-10;51 | |ontology_enrichment_disease_v019=DOID:0060073;7.62e-26;1!DOID:8675;7.62e-26;1!DOID:1240;1.77e-10;39!DOID:2531;3.10e-10;51!DOID:0060083;3.10e-10;51 | ||
|ontology_enrichment_disease_v019_2=DOID:0060073,4.61e-26,1;DOID:8675,4.61e-26,1;DOID:2531,2.35e-12,51;DOID:0060083,2.35e-12,51;DOID:1240,1.46e-10,39 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p8@HPS4 | |short_description=p8@HPS4 | ||
}} | }} |
Latest revision as of 12:39, 19 September 2015
Short description: | p8@HPS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_HPS4_5end |
Coexpression cluster: | C96_non_acute_tonsil_spleen_Burkitt_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000398141_5end |
EntrezGene: | HPS4 |
HGNC: | 15844 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 4.66e-34 | 3 |
B-1 B cell | 4.61e-26 | 1 |
mature B cell | 9.40e-14 | 2 |
pre-B-II cell | 9.40e-14 | 2 |
transitional stage B cell | 9.40e-14 | 2 |
small pre-B-II cell | 9.40e-14 | 2 |
immature B cell | 9.40e-14 | 2 |
B cell | 4.19e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 4.61e-26 | 1 |
lymphosarcoma | 4.61e-26 | 1 |
hematologic cancer | 2.35e-12 | 51 |
immune system cancer | 2.35e-12 | 51 |
leukemia | 1.46e-10 | 39 |