FFCP PHASE1:Hg19::chr1:196743893..196743902,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10878 | |EntrezGene=10878 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16980 | |HGNC=16980 | ||
|TSSclassifier=strong | |||
|UniProt=Q02985 | |UniProt=Q02985 | ||
|association_with_transcript=-22bp_to_ENST00000367425_5end | |association_with_transcript=-22bp_to_ENST00000367425_5end | ||
|cluster_id=chr1:196743893..196743902,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_CFHR3_5end | |description=CAGE_peak_4_at_CFHR3_5end | ||
|id=chr1:196743893..196743902,+ | |id=chr1:196743893..196743902,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.57e-14!12;CL:0000417!2.57e-14!12;CL:0000668!2.57e-14!12;CL:0000414!2.57e-14!12;CL:0000412!2.57e-14!12;CL:0000182!2.57e-14!12 | |ontology_enrichment_celltype=CL:0000181!2.57e-14!12;CL:0000417!2.57e-14!12;CL:0000668!2.57e-14!12;CL:0000414!2.57e-14!12;CL:0000412!2.57e-14!12;CL:0000182!2.57e-14!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.33e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.33e-17,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.48e-19!19;UBERON:0006925!1.48e-19!19;UBERON:0008836!1.48e-19!19;UBERON:0008835!5.13e-17!22;UBERON:0003894!5.13e-17!22;UBERON:0009854!2.57e-16!23;UBERON:0007499!4.40e-15!25;UBERON:0009497!4.40e-15!25;UBERON:0000015!4.40e-15!25;UBERON:0002423!4.40e-15!25;UBERON:0006235!4.40e-15!25;UBERON:0004161!4.40e-15!25;UBERON:0005057!1.55e-14!26;UBERON:0009856!1.55e-14!26;UBERON:0002365!2.48e-12!31;UBERON:0002330!2.48e-12!31;UBERON:0002368!5.12e-11!35;UBERON:0000949!9.62e-09!45;UBERON:0003929!2.08e-07!54;UBERON:0005172!2.75e-07!55;UBERON:0005173!2.75e-07!55;UBERON:0002530!7.68e-07!59 | |ontology_enrichment_uberon=UBERON:0002107!1.48e-19!19;UBERON:0006925!1.48e-19!19;UBERON:0008836!1.48e-19!19;UBERON:0008835!5.13e-17!22;UBERON:0003894!5.13e-17!22;UBERON:0009854!2.57e-16!23;UBERON:0007499!4.40e-15!25;UBERON:0009497!4.40e-15!25;UBERON:0000015!4.40e-15!25;UBERON:0002423!4.40e-15!25;UBERON:0006235!4.40e-15!25;UBERON:0004161!4.40e-15!25;UBERON:0005057!1.55e-14!26;UBERON:0009856!1.55e-14!26;UBERON:0002365!2.48e-12!31;UBERON:0002330!2.48e-12!31;UBERON:0002368!5.12e-11!35;UBERON:0000949!9.62e-09!45;UBERON:0003929!2.08e-07!54;UBERON:0005172!2.75e-07!55;UBERON:0005173!2.75e-07!55;UBERON:0002530!7.68e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.55e-11;19!UBERON:0006925;1.55e-11;19!UBERON:0002423;5.06e-09;25!UBERON:0002368;1.10e-07;33!UBERON:0002365;1.10e-07;31!UBERON:0002330;1.10e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.55e-11,19;UBERON:0006925,1.55e-11,19;UBERON:0008836,1.55e-11,19;UBERON:0008835,4.14e-10,22;UBERON:0003894,4.14e-10,22;UBERON:0009854,1.02e-09,23;UBERON:0007499,5.06e-09,25;UBERON:0009497,5.06e-09,25;UBERON:0000015,5.06e-09,25;UBERON:0002423,5.06e-09,25;UBERON:0006235,5.06e-09,25;UBERON:0004161,5.06e-09,25;UBERON:0009856,1.03e-08,26;UBERON:0002365,1.80e-07,31;UBERON:0002330,1.80e-07,31;UBERON:0002368,9.98e-07,35 | |||
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|short_description=p4@CFHR3 | |short_description=p4@CFHR3 | ||
}} | }} |
Latest revision as of 12:33, 19 September 2015
Short description: | p4@CFHR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CFHR3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -22bp_to_ENST00000367425_5end |
EntrezGene: | CFHR3 |
HGNC: | 16980 |
UniProt: | Q02985 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.33e-17 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.55e-11 | 19 |
digestive gland | 1.55e-11 | 19 |
liver bud | 1.55e-11 | 19 |
hepatic diverticulum | 4.14e-10 | 22 |
liver primordium | 4.14e-10 | 22 |
digestive tract diverticulum | 1.02e-09 | 23 |
epithelial sac | 5.06e-09 | 25 |
epithelium of foregut-midgut junction | 5.06e-09 | 25 |
anatomical boundary | 5.06e-09 | 25 |
hepatobiliary system | 5.06e-09 | 25 |
foregut-midgut junction | 5.06e-09 | 25 |
septum transversum | 5.06e-09 | 25 |
sac | 1.03e-08 | 26 |
exocrine gland | 1.80e-07 | 31 |
exocrine system | 1.80e-07 | 31 |
endocrine gland | 9.98e-07 | 35 |