FFCP PHASE1:Hg19::chr1:85155881..85155892,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=117178 | |EntrezGene=117178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16509 | |HGNC=16509 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=79bp_to_uc001dkg.2,uc001dkh.2,uc009wci.2,uc010orz.1_5end | |association_with_transcript=79bp_to_uc001dkg.2,uc001dkh.2,uc009wci.2,uc010orz.1_5end | ||
|cluster_id=chr1:85155881..85155892,- | |||
|description=CAGE_peak_9_at_SSX2IP_5end | |description=CAGE_peak_9_at_SSX2IP_5end | ||
|id=chr1:85155881..85155892,- | |id=chr1:85155881..85155892,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;6.17e-09;2!CL:0000242;6.17e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.08e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.38e-07;10!UBERON:0005564;3.38e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.14e-17!82;UBERON:0000955!2.34e-17!69;UBERON:0006238!2.34e-17!69;UBERON:0002780!7.16e-17!41;UBERON:0001890!7.16e-17!41;UBERON:0006240!7.16e-17!41;UBERON:0000073!9.68e-17!94;UBERON:0001016!9.68e-17!94;UBERON:0005743!2.46e-16!86;UBERON:0003080!2.66e-16!42;UBERON:0001049!2.67e-16!57;UBERON:0005068!2.67e-16!57;UBERON:0006241!2.67e-16!57;UBERON:0007135!2.67e-16!57;UBERON:0001869!9.80e-16!32;UBERON:0002616!1.87e-15!59;UBERON:0001893!1.78e-14!34;UBERON:0002020!3.46e-14!34;UBERON:0003528!3.46e-14!34;UBERON:0002791!2.37e-13!33;UBERON:0000956!2.58e-13!25;UBERON:0000203!2.58e-13!25;UBERON:0000153!3.56e-12!129;UBERON:0007811!3.56e-12!129;UBERON:0003075!3.66e-12!86;UBERON:0007284!3.66e-12!86;UBERON:0003056!5.18e-12!61;UBERON:0002619!6.72e-12!22;UBERON:0004121!1.64e-11!169;UBERON:0001950!2.23e-11!20;UBERON:0002346!3.34e-11!90;UBERON:0000033!4.81e-11!123;UBERON:0000924!6.24e-11!173;UBERON:0006601!6.24e-11!173;UBERON:0000200!1.28e-10!6;UBERON:0007023!1.86e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002902;1.53e-16;1!UBERON:0009899;1.53e-16;1!UBERON:0002021;3.88e-13;5!UBERON:0001950;6.75e-12;20!UBERON:0002619;6.88e-11;22!UBERON:0000956;1.15e-09;25!UBERON:0000203;1.15e-09;25!UBERON:0000007;6.17e-09;2!UBERON:0000473;8.78e-09;8!UBERON:0002780;1.37e-07;41!UBERON:0001890;1.37e-07;41!UBERON:0002791;2.01e-07;32!UBERON:0001869;2.01e-07;32!UBERON:0001893;7.28e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002902,2.25e-16,1;UBERON:0009899,2.25e-16,1;UBERON:0002021,4.39e-13,5;UBERON:0001950,8.48e-12,20;UBERON:0002619,8.47e-11,22;UBERON:0000073,7.11e-10,53;UBERON:0002616,7.11e-10,53;UBERON:0000956,1.38e-09,25;UBERON:0000203,1.38e-09,25;UBERON:0001049,2.43e-09,56;UBERON:0005068,2.43e-09,56;UBERON:0006241,2.43e-09,56;UBERON:0007135,2.43e-09,56;UBERON:0002780,5.22e-09,41;UBERON:0001890,5.22e-09,41;UBERON:0003080,5.22e-09,41;UBERON:0006240,5.22e-09,41;UBERON:0000007,6.42e-09,2;UBERON:0000473,8.62e-09,8;UBERON:0007023,6.37e-08,114;UBERON:0002791,1.32e-07,32;UBERON:0001869,1.32e-07,32;UBERON:0000955,1.48e-07,68;UBERON:0006238,1.48e-07,68;UBERON:0003528,3.49e-07,34;UBERON:0002020,3.49e-07,34;UBERON:0001893,3.49e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0,0.125542639594803,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0.916853528483988,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.206105058476878,0,0,1.68776332241266,1.36411807225678,0,0,0,0.355009592516614,0.906768884048762,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0,0.280660094433074,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0.121360521749513,0,0,0,0,0,0,0,0,0,2.74463030566391,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.834912883456661,0,0,0,0,0,0,0,1.03423011972439,0,0,0,0.361789315876224,0,1.54810963903714,0.886642856860642,0.658156191461918,0,0.139423744278603,0,0.227884111694002,0,0,0,0,0,0,0,0,0.166211681900156,0.451191321234361,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0.0967563312890851,0,0.0821154570532092,0,0.970817393606503,0.90392296312213,0,0,1.13959432720582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0.0824158583811665,0.0674035438541849,0.0984274815147488,0.0846733320657845,0.795229689809303,0,0,0,0,0,0,0.485996453264197,0,0.315222829196793,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.854183854313742,0.751145584238999,0.573409195690071,0,0,0.415045904808692,0.249960815924213,0,0,0,1.40500471742064,0.434763085832475,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0.466311601748341,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0.157265941855896,0,0,0,0,0,0,0,0,0,0.3062454773532,0.834979926253974,0,0.478901577171454,1.23069818544453,0,1.10651603942749,0.484426936895553,0,0.196295437002051,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.675375846183947,0,1.03343398250592,0.443910671357348,0,0,0.496211178389294,0,0.127762427639595,0,0,1.21393120847326,0.682986574053893,0,0,0,0.135939465953663,0.328863867814245,0.118193840883968,0.111231401892069,0,0.157115589916002,0,0,0,0,0,0.158013611732727,0,0,0,0.207216164163037,0,0.691259661814092,0,0.236664001461131,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0.467878926924211,0.198950775161368,0.118920090777569,0.11294608203896,0.219881033490858,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,3.10692662694782,2.94760543171796,0,0.103432995861895,0,0.476128862927481,0.0645889098360061,0.186224142887574,0,0,0.202117188958219,0,0,0,0,0.332660356546013,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 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| ||
|short_description=p9@SSX2IP | |short_description=p9@SSX2IP | ||
}} | }} |
Latest revision as of 12:23, 19 September 2015
Short description: | p9@SSX2IP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SSX2IP_5end |
Coexpression cluster: | NA |
Association with transcript: | 79bp_to_uc001dkg.2, uc001dkh.2, uc009wci.2, uc010orz.1_5end |
EntrezGene: | SSX2IP |
HGNC: | 16509 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.08e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
occipital pole | 2.25e-16 | 1 |
pole of cerebral hemisphere | 2.25e-16 | 1 |
occipital lobe | 4.39e-13 | 5 |
neocortex | 8.48e-12 | 20 |
regional part of cerebral cortex | 8.47e-11 | 22 |
regional part of nervous system | 7.11e-10 | 53 |
regional part of brain | 7.11e-10 | 53 |
cerebral cortex | 1.38e-09 | 25 |
pallium | 1.38e-09 | 25 |
neural tube | 2.43e-09 | 56 |
neural rod | 2.43e-09 | 56 |
future spinal cord | 2.43e-09 | 56 |
neural keel | 2.43e-09 | 56 |
regional part of forebrain | 5.22e-09 | 41 |
forebrain | 5.22e-09 | 41 |
anterior neural tube | 5.22e-09 | 41 |
future forebrain | 5.22e-09 | 41 |
pituitary gland | 6.42e-09 | 2 |
testis | 8.62e-09 | 8 |
adult organism | 6.37e-08 | 114 |
regional part of telencephalon | 1.32e-07 | 32 |
cerebral hemisphere | 1.32e-07 | 32 |
brain | 1.48e-07 | 68 |
future brain | 1.48e-07 | 68 |
brain grey matter | 3.49e-07 | 34 |
gray matter | 3.49e-07 | 34 |
telencephalon | 3.49e-07 | 34 |