FFCP PHASE1:Hg19::chr8:93978346..93978355,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:93978346..93978355,- to FFCP PHASE1:Hg19::chr8:93978346..93978355,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=286144 | |EntrezGene=286144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27828 | |HGNC=27828 | ||
|TSSclassifier=strong | |||
|UniProt=E5RG44 | |UniProt=E5RG44 | ||
|association_with_transcript=0bp_to_ENST00000523580_5end | |||
|cluster_id=chr8:93978346..93978355,- | |||
|description=CAGE_peak_5_at_C8orf83_5end | |||
|id=chr8:93978346..93978355,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.39e-13!94;UBERON:0001016!1.39e-13!94;UBERON:0001017!1.86e-13!82;UBERON:0005743!3.65e-13!86;UBERON:0001049!1.66e-12!57;UBERON:0005068!1.66e-12!57;UBERON:0006241!1.66e-12!57;UBERON:0007135!1.66e-12!57;UBERON:0000955!2.05e-12!69;UBERON:0006238!2.05e-12!69;UBERON:0002616!2.85e-11!59;UBERON:0003080!1.03e-10!42;UBERON:0002780!1.66e-10!41;UBERON:0001890!1.66e-10!41;UBERON:0006240!1.66e-10!41;UBERON:0000924!3.81e-10!173;UBERON:0006601!3.81e-10!173;UBERON:0002346!6.63e-10!90;UBERON:0004121!6.96e-10!169;UBERON:0003075!1.07e-09!86;UBERON:0007284!1.07e-09!86;UBERON:0002020!5.73e-09!34;UBERON:0003528!5.73e-09!34;UBERON:0000033!2.85e-08!123;UBERON:0007023!4.48e-08!115;UBERON:0001893!5.45e-08!34;UBERON:0001869!6.80e-08!32;UBERON:0002791!1.01e-07!33;UBERON:0003056!2.30e-07!61;UBERON:0000153!2.33e-07!129;UBERON:0007811!2.33e-07!129;UBERON:0002619!2.57e-07!22;UBERON:0001950!3.12e-07!20;UBERON:0000062!4.23e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.88e-09;34!UBERON:0002020;1.88e-09;34!UBERON:0001950;2.21e-09;20!UBERON:0002780;2.33e-09;41!UBERON:0001890;2.33e-09;41!UBERON:0002791;2.92e-09;32!UBERON:0000073;5.09e-09;53!UBERON:0002616;5.09e-09;53!UBERON:0002619;7.79e-09;22!UBERON:0001869;1.14e-08;32!UBERON:0001893;2.40e-08;34!UBERON:0000956;5.71e-07;25!UBERON:0000203;5.71e-07;25!UBERON:0000955;9.45e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.23e-15,89;UBERON:0001049,6.71e-15,56;UBERON:0005068,6.71e-15,56;UBERON:0006241,6.71e-15,56;UBERON:0007135,6.71e-15,56;UBERON:0001017,1.24e-14,81;UBERON:0000955,2.40e-14,68;UBERON:0006238,2.40e-14,68;UBERON:0000073,2.41e-14,53;UBERON:0002616,2.41e-14,53;UBERON:0002780,8.54e-13,41;UBERON:0001890,8.54e-13,41;UBERON:0003080,8.54e-13,41;UBERON:0006240,8.54e-13,41;UBERON:0003528,2.06e-11,34;UBERON:0002020,2.06e-11,34;UBERON:0002791,3.15e-10,32;UBERON:0001869,5.06e-10,32;UBERON:0001893,5.68e-10,34;UBERON:0001950,2.41e-09,20;UBERON:0010371,2.96e-09,104;UBERON:0002619,5.25e-09,22;UBERON:0004121,6.18e-09,171;UBERON:0000924,6.18e-09,171;UBERON:0006601,6.18e-09,171;UBERON:0002346,2.36e-08,86;UBERON:0003075,2.49e-08,82;UBERON:0007284,2.49e-08,82;UBERON:0003056,1.51e-07,61;UBERON:0010314,3.54e-07,132;UBERON:0000956,4.02e-07,25;UBERON:0000203,4.02e-07,25 | |||
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| ||
|short_description=p5@C8orf83 | |||
}} | }} |
Latest revision as of 12:10, 19 September 2015
Short description: | p5@C8orf83 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C8orf83_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000523580_5end |
EntrezGene: | C8orf83 |
HGNC: | 27828 |
UniProt: | E5RG44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 3.23e-15 | 89 |
neural tube | 6.71e-15 | 56 |
neural rod | 6.71e-15 | 56 |
future spinal cord | 6.71e-15 | 56 |
neural keel | 6.71e-15 | 56 |
central nervous system | 1.24e-14 | 81 |
brain | 2.40e-14 | 68 |
future brain | 2.40e-14 | 68 |
regional part of nervous system | 2.41e-14 | 53 |
regional part of brain | 2.41e-14 | 53 |
regional part of forebrain | 8.54e-13 | 41 |
forebrain | 8.54e-13 | 41 |
anterior neural tube | 8.54e-13 | 41 |
future forebrain | 8.54e-13 | 41 |
brain grey matter | 2.06e-11 | 34 |
gray matter | 2.06e-11 | 34 |
regional part of telencephalon | 3.15e-10 | 32 |
cerebral hemisphere | 5.06e-10 | 32 |
telencephalon | 5.68e-10 | 34 |
neocortex | 2.41e-09 | 20 |
ecto-epithelium | 2.96e-09 | 104 |
regional part of cerebral cortex | 5.25e-09 | 22 |
ectoderm-derived structure | 6.18e-09 | 171 |
ectoderm | 6.18e-09 | 171 |
presumptive ectoderm | 6.18e-09 | 171 |
neurectoderm | 2.36e-08 | 86 |
neural plate | 2.49e-08 | 82 |
presumptive neural plate | 2.49e-08 | 82 |
pre-chordal neural plate | 1.51e-07 | 61 |
structure with developmental contribution from neural crest | 3.54e-07 | 132 |
cerebral cortex | 4.02e-07 | 25 |
pallium | 4.02e-07 | 25 |