FFCP PHASE1:Hg19::chr3:109128858..109128884,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=401082 | |EntrezGene=401082 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENST00000497996,NM_001145553,uc003dxr.1_5end | |association_with_transcript=21bp_to_ENST00000497996,NM_001145553,uc003dxr.1_5end | ||
|cluster_id=chr3:109128858..109128884,+ | |||
|description=CAGE_peak_1_at_FLJ25363_5end | |description=CAGE_peak_1_at_FLJ25363_5end | ||
|id=chr3:109128858..109128884,+ | |id=chr3:109128858..109128884,+ | ||
|ontology_enrichment_celltype=CL:0000039!3.64e-49!7;CL:0000586!3.64e-49!7;CL:0002553!2.02e-08!1 | |ontology_enrichment_celltype=CL:0000039!3.64e-49!7;CL:0000586!3.64e-49!7;CL:0002553!2.02e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.94e-57;7!CL:0000586;1.94e-57;7!CL:0002553;2.33e-12;1!CL:1000415;4.97e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.25e-57,7;CL:0000586,2.25e-57,7;CL:0002553,2.20e-12,1;CL:1000415,5.11e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.09e-18;10!UBERON:0005564;4.09e-18;10!UBERON:0003124;2.33e-12;1 | |||
|ontology_enrichment_disease=DOID:3095!7.80e-25!22;DOID:2994!7.80e-25!22;DOID:0050687!3.00e-12!143;DOID:305!3.82e-10!106;DOID:162!5.87e-09!235;DOID:14566!1.09e-08!239;DOID:0050619!4.11e-08!1;DOID:1357!4.11e-08!1;DOID:1799!5.07e-08!1;DOID:10165!5.07e-08!1;DOID:1798!5.07e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.17e-31;22!DOID:2994;1.17e-31;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.06e-31,22;DOID:2994,1.06e-31,22;DOID:0050687,1.46e-09,143;DOID:305,2.14e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.40e-31!8;UBERON:0003135!1.71e-22!11;UBERON:0000991!1.51e-11!21;UBERON:0009196!1.51e-11!21;UBERON:0009117!1.51e-11!21;UBERON:0005564!1.51e-11!21;UBERON:0004176!5.33e-11!22;UBERON:0003101!5.33e-11!22;UBERON:0000079!5.33e-11!22;UBERON:0002323!1.27e-08!46;UBERON:0001764!4.11e-08!1;UBERON:0001825!4.11e-08!1;UBERON:0004458!5.01e-08!49;UBERON:0001282!5.43e-08!1;UBERON:0009842!5.43e-08!1;UBERON:0003704!5.43e-08!1;UBERON:0001171!5.43e-08!1;UBERON:0001172!5.43e-08!1 | |ontology_enrichment_uberon=UBERON:0000473!4.40e-31!8;UBERON:0003135!1.71e-22!11;UBERON:0000991!1.51e-11!21;UBERON:0009196!1.51e-11!21;UBERON:0009117!1.51e-11!21;UBERON:0005564!1.51e-11!21;UBERON:0004176!5.33e-11!22;UBERON:0003101!5.33e-11!22;UBERON:0000079!5.33e-11!22;UBERON:0002323!1.27e-08!46;UBERON:0001764!4.11e-08!1;UBERON:0001825!4.11e-08!1;UBERON:0004458!5.01e-08!49;UBERON:0001282!5.43e-08!1;UBERON:0009842!5.43e-08!1;UBERON:0003704!5.43e-08!1;UBERON:0001171!5.43e-08!1;UBERON:0001172!5.43e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.46e-22;8!UBERON:0003135;1.70e-16;11!UBERON:0000991;9.49e-09;21!UBERON:0003101;2.33e-08;22!UBERON:0000079;2.33e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.38e-22,8;UBERON:0003135,1.63e-16,11;UBERON:0000991,9.30e-09,21;UBERON:0009196,9.30e-09,21;UBERON:0009117,9.30e-09,21;UBERON:0005564,9.30e-09,21;UBERON:0004176,2.28e-08,22;UBERON:0003101,2.28e-08,22;UBERON:0000079,2.28e-08,22 | |||
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|short_description=p1@FLJ25363 | |short_description=p1@FLJ25363 | ||
}} | }} |
Latest revision as of 12:02, 19 September 2015
Short description: | p1@FLJ25363 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FLJ25363_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000497996, NM_001145553, uc003dxr.1_5end |
EntrezGene: | FLJ25363 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.25e-57 | 7 |
germ cell | 2.25e-57 | 7 |
lung fibroblast | 2.20e-12 | 1 |
epithelial cell of gall bladder | 5.11e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 1.38e-22 | 8 |
male reproductive organ | 1.63e-16 | 11 |
gonad | 9.30e-09 | 21 |
indifferent external genitalia | 9.30e-09 | 21 |
indifferent gonad | 9.30e-09 | 21 |
gonad primordium | 9.30e-09 | 21 |
external genitalia | 2.28e-08 | 22 |
male organism | 2.28e-08 | 22 |
male reproductive system | 2.28e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.06e-31 | 22 |
germ cell cancer | 1.06e-31 | 22 |
cell type cancer | 1.46e-09 | 143 |
carcinoma | 2.14e-07 | 106 |