FFCP PHASE1:Hg19::chrX:132435576..132435582,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:132435576..132435582,- to FFCP PHASE1:Hg19::chrX:132435576..132435582,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2239 | |EntrezGene=2239 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4452 | |HGNC=4452 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_AF088063_5end | |||
|cluster_id=chrX:132435576..132435582,- | |||
|description=CAGE_peak_6_at_GPC4_5end | |||
|id=chrX:132435576..132435582,- | |||
|ontology_enrichment_celltype=CL:0002319!2.67e-07!25;CL:0000540!4.18e-07!6;CL:0000031!4.18e-07!6;CL:0000404!4.18e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002580;3.40e-16;3!CL:0002617;8.69e-11;2!CL:0002334;2.21e-10;12!CL:0000540;4.08e-08;6!CL:0000404;4.08e-08;6!CL:0002541;7.78e-08;3!CL:0002615;1.13e-07;3!CL:0002605;1.80e-07;3!CL:0002579;1.80e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.93e-16,3;CL:0002617,6.13e-11,2;CL:0002334,2.08e-10,12;CL:0000540,2.75e-08,6;CL:0000031,2.75e-08,6;CL:0000404,2.75e-08,6;CL:0002541,8.06e-08,3;CL:0002615,1.13e-07,3;CL:0002605,1.25e-07,3;CL:0002579,2.35e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;4.08e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;8.69e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,6.78e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.84e-07!6;UBERON:0002358!1.84e-07!6;UBERON:0003684!1.84e-07!6;UBERON:0001178!1.84e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.75e-13;6!UBERON:0002358;1.75e-13;6!UBERON:0003684;1.75e-13;6!UBERON:0001178;1.75e-13;6!UBERON:0000310;1.65e-12;10!UBERON:0001443;2.38e-11;11!UBERON:0004457;4.99e-09;9!UBERON:0000042;4.99e-09;9!UBERON:0003124;7.78e-08;3!UBERON:0000920;7.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.28e-13,6;UBERON:0002358,2.28e-13,6;UBERON:0003684,2.28e-13,6;UBERON:0001178,2.28e-13,6;UBERON:0000310,1.06e-12,10;UBERON:0001443,1.60e-11,11;UBERON:0000920,8.06e-08,3;UBERON:0003124,2.73e-07,7;UBERON:0004457,9.82e-07,12;UBERON:0000042,9.82e-07,12 | |||
|phase1_expression=1.2717486548939,1.71280419112787,0.422863212287913,2.00146596706261,1.34088328328186,0.872338524100369,0,0,0.261185628199839,0,0,0.873765488520689,0.527533956456907,0,0,0,0,0,0,0.246242116153576,0,0,0.85870796139317,1.50561867580173,1.50651167513763,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0,0,0,0.472674085820339,0.886917589850256,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.298897361103602,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0.427114777637135,0.211931901159562,0,0,0,0.18611685633159,0.506328996723799,0.292311015483596,0,0.276149695926898,0,0.355009592516614,0.201504196455281,0,0,0.272746120590835,0,0.853815942907168,0.662648841607426,1.16193942869518,0.518305275076852,0.756962552626885,5.10968302706162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.439001141634502,0,0.201057944823262,0.185176890317059,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0.936017060556951,0.297262324577456,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.531876233169741,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,3.64871341923571,0.502257091432126,2.10833939483032,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0.303127571446259,4.99306318531491,0,1.73675465473144,3.37616341233737,3.92924132206303,0.768834895534206,1.02341449813341,1.44768529029247,0,0,0,0.0821271560138091,0,0.232420756919918,0,1.60405176242628,0,0,0,0,0,0.616122696835318,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0.206082023295445,0.183138929636687,0.330037999682352,0,0.650060246036521,0,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0,0,0.356128142586949,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,1.06824071127473,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,2.74463030566391,0,0,0,0.613612095012929,0,0,0.718946809178615,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0.718061155278177,0.108647371922008,1.27600463892768,0.549585560411174,4.26427820814908,0,0,0,0,0,0,0,0,1.47698645169619,1.30586246527318,0,1.29833183845255,0,0,1.22206028986725,0,0.370691816839509,0,0.067401132980677,0.802577647298789,0,0,0,0,0.394584402849391,1.20990716048664,0.61214552326098,0.189559738885464,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0.694238953340524,0,0,0.17472666824203,0.51595809741485,0,0,0,0.387956065953678,0.0882561266915003,0,0,0,0,0,0,0.640358984218058,0,0.144090417154106,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,1.92903778158023,3.16340704173638,1.66176135211674,0,0,0,0,0.315222829196793,0.104909176269996,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0,0.221858103073705,0.0620964029413835,0.276697269872462,0.249960815924213,0,0,0,0.468334905806882,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0.512483037175893,0,0,0,0.389720617678777,0.132864840313363,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,3.87943538059752,2.7562092961788,0,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0.397832444232549,0.150420656698515,0.20170506870352,0,1.04762677792569,0,0,0,0,0,0,1.09394961803644,0.548257766857182,0,0,0.894336993477167,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0.111231401892069,0.235479278551542,0.157115589916002,0,0,0.431855182437243,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0.955538938977433,1.23040974977572,0,0.121917924982269,0.647428837187895,0.102662806856247,5.799072156691,0,0,0,0,0,0,0.301925687133347,0.0771741581079447,0,4.23285566725371,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0.946629373159108,0,0,0,3.71995018166751,0,0.865253124247578,2.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| |phase1_expression=1.2717486548939,1.71280419112787,0.422863212287913,2.00146596706261,1.34088328328186,0.872338524100369,0,0,0.261185628199839,0,0,0.873765488520689,0.527533956456907,0,0,0,0,0,0,0.246242116153576,0,0,0.85870796139317,1.50561867580173,1.50651167513763,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0,0,0,0.472674085820339,0.886917589850256,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.298897361103602,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0.427114777637135,0.211931901159562,0,0,0,0.18611685633159,0.506328996723799,0.292311015483596,0,0.276149695926898,0,0.355009592516614,0.201504196455281,0,0,0.272746120590835,0,0.853815942907168,0.662648841607426,1.16193942869518,0.518305275076852,0.756962552626885,5.10968302706162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.439001141634502,0,0.201057944823262,0.185176890317059,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0.936017060556951,0.297262324577456,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.531876233169741,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,3.64871341923571,0.502257091432126,2.10833939483032,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0.303127571446259,4.99306318531491,0,1.73675465473144,3.37616341233737,3.92924132206303,0.768834895534206,1.02341449813341,1.44768529029247,0,0,0,0.0821271560138091,0,0.232420756919918,0,1.60405176242628,0,0,0,0,0,0.616122696835318,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0.206082023295445,0.183138929636687,0.330037999682352,0,0.650060246036521,0,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0,0,0.356128142586949,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,1.06824071127473,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,2.74463030566391,0,0,0,0.613612095012929,0,0,0.718946809178615,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0.718061155278177,0.108647371922008,1.27600463892768,0.549585560411174,4.26427820814908,0,0,0,0,0,0,0,0,1.47698645169619,1.30586246527318,0,1.29833183845255,0,0,1.22206028986725,0,0.370691816839509,0,0.067401132980677,0.802577647298789,0,0,0,0,0.394584402849391,1.20990716048664,0.61214552326098,0.189559738885464,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0.694238953340524,0,0,0.17472666824203,0.51595809741485,0,0,0,0.387956065953678,0.0882561266915003,0,0,0,0,0,0,0.640358984218058,0,0.144090417154106,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,1.92903778158023,3.16340704173638,1.66176135211674,0,0,0,0,0.315222829196793,0.104909176269996,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0,0.221858103073705,0.0620964029413835,0.276697269872462,0.249960815924213,0,0,0,0.468334905806882,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0.512483037175893,0,0,0,0.389720617678777,0.132864840313363,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,3.87943538059752,2.7562092961788,0,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0.397832444232549,0.150420656698515,0.20170506870352,0,1.04762677792569,0,0,0,0,0,0,1.09394961803644,0.548257766857182,0,0,0.894336993477167,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0.111231401892069,0.235479278551542,0.157115589916002,0,0,0.431855182437243,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0.955538938977433,1.23040974977572,0,0.121917924982269,0.647428837187895,0.102662806856247,5.799072156691,0,0,0,0,0,0,0.301925687133347,0.0771741581079447,0,4.23285566725371,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0.946629373159108,0,0,0,3.71995018166751,0,0.865253124247578,2.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| ||
|short_description=p6@GPC4 | |||
}} | }} |
Latest revision as of 12:00, 19 September 2015
Short description: | p6@GPC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GPC4_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_AF088063_5end |
EntrezGene: | GPC4 |
HGNC: | 4452 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.93e-16 | 3 |
adipocyte of breast | 6.13e-11 | 2 |
preadipocyte | 2.08e-10 | 12 |
neuron | 2.75e-08 | 6 |
neuroblast | 2.75e-08 | 6 |
electrically signaling cell | 2.75e-08 | 6 |
chorionic membrane mesenchymal stem cell | 8.06e-08 | 3 |
adipocyte of omentum tissue | 1.13e-07 | 3 |
astrocyte of the cerebral cortex | 1.25e-07 | 3 |
omentum preadipocyte | 2.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.28e-13 | 6 |
peritoneum | 2.28e-13 | 6 |
abdominal cavity | 2.28e-13 | 6 |
visceral peritoneum | 2.28e-13 | 6 |
breast | 1.06e-12 | 10 |
chest | 1.60e-11 | 11 |
egg chorion | 8.06e-08 | 3 |
chorion | 2.73e-07 | 7 |
cavity lining | 9.82e-07 | 12 |
serous membrane | 9.82e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 6.78e-11 | 2 |