FFCP PHASE1:Hg19::chr1:8483821..8483845,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=473 | |EntrezGene=473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9965 | |HGNC=9965 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P2R6 | |UniProt=Q9P2R6 | ||
|association_with_transcript=-74bp_to_NM_001042682,uc001apd.2_5end | |association_with_transcript=-74bp_to_NM_001042682,uc001apd.2_5end | ||
|cluster_id=chr1:8483821..8483845,- | |||
|description=CAGE_peak_11_at_RERE_5end | |description=CAGE_peak_11_at_RERE_5end | ||
|id=chr1:8483821..8483845,- | |id=chr1:8483821..8483845,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.73e-23!115;UBERON:0001049!2.35e-09!57;UBERON:0005068!2.35e-09!57;UBERON:0006241!2.35e-09!57;UBERON:0007135!2.35e-09!57;UBERON:0003075!4.46e-09!86;UBERON:0007284!4.46e-09!86;UBERON:0002346!8.73e-09!90;UBERON:0001869!2.28e-08!32;UBERON:0002616!2.64e-08!59;UBERON:0000956!4.21e-08!25;UBERON:0000203!4.21e-08!25;UBERON:0002619!7.38e-08!22;UBERON:0003056!8.64e-08!61;UBERON:0005743!8.75e-08!86;UBERON:0001893!1.05e-07!34;UBERON:0000955!1.10e-07!69;UBERON:0006238!1.10e-07!69;UBERON:0000153!1.15e-07!129;UBERON:0007811!1.15e-07!129;UBERON:0003080!1.53e-07!42;UBERON:0004111!2.00e-07!241;UBERON:0001017!2.07e-07!82;UBERON:0002780!2.64e-07!41;UBERON:0001890!2.64e-07!41;UBERON:0006240!2.64e-07!41;UBERON:0002791!2.74e-07!33;UBERON:0001950!4.72e-07!20;UBERON:0002020!6.24e-07!34;UBERON:0003528!6.24e-07!34;UBERON:0000477!7.25e-07!286 | |ontology_enrichment_uberon=UBERON:0007023!2.73e-23!115;UBERON:0001049!2.35e-09!57;UBERON:0005068!2.35e-09!57;UBERON:0006241!2.35e-09!57;UBERON:0007135!2.35e-09!57;UBERON:0003075!4.46e-09!86;UBERON:0007284!4.46e-09!86;UBERON:0002346!8.73e-09!90;UBERON:0001869!2.28e-08!32;UBERON:0002616!2.64e-08!59;UBERON:0000956!4.21e-08!25;UBERON:0000203!4.21e-08!25;UBERON:0002619!7.38e-08!22;UBERON:0003056!8.64e-08!61;UBERON:0005743!8.75e-08!86;UBERON:0001893!1.05e-07!34;UBERON:0000955!1.10e-07!69;UBERON:0006238!1.10e-07!69;UBERON:0000153!1.15e-07!129;UBERON:0007811!1.15e-07!129;UBERON:0003080!1.53e-07!42;UBERON:0004111!2.00e-07!241;UBERON:0001017!2.07e-07!82;UBERON:0002780!2.64e-07!41;UBERON:0001890!2.64e-07!41;UBERON:0006240!2.64e-07!41;UBERON:0002791!2.74e-07!33;UBERON:0001950!4.72e-07!20;UBERON:0002020!6.24e-07!34;UBERON:0003528!6.24e-07!34;UBERON:0000477!7.25e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.69e-09;22!UBERON:0000956;4.94e-09;25!UBERON:0000203;4.94e-09;25!UBERON:0001950;3.66e-08;20!UBERON:0001869;5.78e-08;32!UBERON:0001893;3.22e-07;34!UBERON:0002791;5.21e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0002619;4.69e-09;22!UBERON:0000956;4.94e-09;25!UBERON:0000203;4.94e-09;25!UBERON:0001950;3.66e-08;20!UBERON:0001869;5.78e-08;32!UBERON:0001893;3.22e-07;34!UBERON:0002791;5.21e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.75e-25,114;UBERON:0000956,6.88e-10,25;UBERON:0000203,6.88e-10,25;UBERON:0002619,1.22e-09,22;UBERON:0001869,1.30e-09,32;UBERON:0000073,2.20e-09,53;UBERON:0002616,2.20e-09,53;UBERON:0001049,2.56e-09,56;UBERON:0005068,2.56e-09,56;UBERON:0006241,2.56e-09,56;UBERON:0007135,2.56e-09,56;UBERON:0001950,1.08e-08,20;UBERON:0003075,1.48e-08,82;UBERON:0007284,1.48e-08,82;UBERON:0002791,1.71e-08,32;UBERON:0001893,2.10e-08,34;UBERON:0010314,2.27e-08,132;UBERON:0002346,2.60e-08,86;UBERON:0000955,1.13e-07,68;UBERON:0006238,1.13e-07,68;UBERON:0002780,1.47e-07,41;UBERON:0001890,1.47e-07,41;UBERON:0003080,1.47e-07,41;UBERON:0006240,1.47e-07,41;UBERON:0003528,2.13e-07,34;UBERON:0002020,2.13e-07,34;UBERON:0003056,3.08e-07,61;UBERON:0001017,3.61e-07,81;UBERON:0000479,6.43e-07,773;UBERON:0004111,7.27e-07,240 | |||
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| ||
|short_description=p11@RERE | |short_description=p11@RERE | ||
}} | }} |
Latest revision as of 11:48, 19 September 2015
Short description: | p11@RERE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RERE_5end |
Coexpression cluster: | NA |
Association with transcript: | -74bp_to_NM_001042682, uc001apd.2_5end |
EntrezGene: | RERE |
HGNC: | 9965 |
UniProt: | Q9P2R6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.75e-25 | 114 |
cerebral cortex | 6.88e-10 | 25 |
pallium | 6.88e-10 | 25 |
regional part of cerebral cortex | 1.22e-09 | 22 |
cerebral hemisphere | 1.30e-09 | 32 |
regional part of nervous system | 2.20e-09 | 53 |
regional part of brain | 2.20e-09 | 53 |
neural tube | 2.56e-09 | 56 |
neural rod | 2.56e-09 | 56 |
future spinal cord | 2.56e-09 | 56 |
neural keel | 2.56e-09 | 56 |
neocortex | 1.08e-08 | 20 |
neural plate | 1.48e-08 | 82 |
presumptive neural plate | 1.48e-08 | 82 |
regional part of telencephalon | 1.71e-08 | 32 |
telencephalon | 2.10e-08 | 34 |
structure with developmental contribution from neural crest | 2.27e-08 | 132 |
neurectoderm | 2.60e-08 | 86 |
brain | 1.13e-07 | 68 |
future brain | 1.13e-07 | 68 |
regional part of forebrain | 1.47e-07 | 41 |
forebrain | 1.47e-07 | 41 |
anterior neural tube | 1.47e-07 | 41 |
future forebrain | 1.47e-07 | 41 |
brain grey matter | 2.13e-07 | 34 |
gray matter | 2.13e-07 | 34 |
pre-chordal neural plate | 3.08e-07 | 61 |
central nervous system | 3.61e-07 | 81 |
tissue | 6.43e-07 | 773 |
anatomical conduit | 7.27e-07 | 240 |