FFCP PHASE1:Hg19::chr11:65625643..65625659,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:65625643..65625659,-
|short_description=p1@CFL1
|description=CAGE_peak_1_at_CFL1_5end
|association_with_transcript=5bp_to_ENST00000530945_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1072 | |EntrezGene=1072 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1874 | |HGNC=1874 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_ENST00000530945_5end | |||
|cluster_id=chr11:65625643..65625659,- | |||
|coexpression_cluster_id=C2155 | |||
|description=CAGE_peak_1_at_CFL1_5end | |||
|id=chr11:65625643..65625659,- | |||
|ontology_enrichment_celltype=CL:0002371!5.53e-50!591;CL:0000144!7.90e-48!625;CL:0000548!2.87e-47!679;CL:0000004!2.87e-47!679;CL:0000255!2.87e-47!679;CL:0000012!4.10e-46!682;CL:0000003!1.51e-39!722;CL:0000222!3.42e-26!119;CL:0000220!1.08e-23!246;CL:0002321!1.59e-23!248;CL:0000063!2.89e-20!578;CL:0000055!9.96e-20!180;CL:0000723!5.88e-17!436;CL:0000048!1.17e-16!430;CL:0000183!3.37e-16!59;CL:0000192!3.48e-16!42;CL:0000514!3.48e-16!42;CL:0000034!4.06e-16!444;CL:0000680!1.42e-15!57;CL:0000056!1.42e-15!57;CL:0000355!1.42e-15!57;CL:0000187!8.66e-15!54;CL:0000393!1.77e-14!60;CL:0000211!1.77e-14!60;CL:0000359!3.55e-14!32;CL:0000115!4.12e-13!35;CL:0002078!2.50e-11!44;CL:0002139!1.55e-10!24;CL:0000213!2.95e-10!57;CL:0000215!2.95e-10!57;CL:0000071!1.18e-09!18;CL:0002546!1.18e-09!18;CL:1000449!1.52e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.70e-13;32!CL:0000115;2.02e-11;36!CL:0000192;5.37e-11;43!CL:0002139;1.56e-10;24!CL:0000071;1.19e-09;18!CL:1000449;1.58e-08;15!CL:0002078;7.43e-08;45!CL:0000187;7.59e-08;55!CL:1000497;5.62e-07;17!CL:0002518;5.62e-07;17!CL:0002681;5.69e-07;12!CL:0002584;5.69e-07;12!CL:0000393;5.88e-07;61!CL:0000211;5.88e-07;61!CL:0000213;7.35e-07;58!CL:0000215;7.35e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.73e-26,121;CL:0002321,1.66e-23,250;CL:0000723,8.49e-17,433;CL:0000048,1.67e-16,427;CL:0000034,5.85e-16,441;CL:0000192,2.36e-15,43;CL:0000514,2.36e-15,43;CL:0000680,6.49e-15,58;CL:0000056,6.49e-15,58;CL:0000355,6.49e-15,58;CL:0000359,3.55e-14,32;CL:0000187,3.94e-14,55;CL:0000393,7.13e-14,61;CL:0000211,7.13e-14,61;CL:0000115,1.86e-13,36;CL:0002078,1.16e-11,45;CL:0000213,1.43e-10,58;CL:0000215,1.43e-10,58;CL:0002139,1.55e-10,24;CL:0000071,1.18e-09,18;CL:0002546,1.18e-09,18;CL:1000449,1.59e-08,15;CL:1000497,5.63e-07,17;CL:0002518,5.63e-07,17;CL:0002681,5.71e-07,12;CL:0002584,5.71e-07,12;CL:0000076,7.53e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000514;5.37e-11;43!CL:0002546;1.19e-09;18!CL:0000222;4.28e-08;121!CL:0000355;4.41e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.34e-21!79;UBERON:0007798!3.34e-21!79;UBERON:0000055!6.20e-19!69;UBERON:0001981!2.19e-17!60;UBERON:0007500!2.19e-17!60;UBERON:0004537!2.19e-17!60;UBERON:0006965!2.19e-17!60;UBERON:0001637!3.79e-16!42;UBERON:0003509!3.79e-16!42;UBERON:0004572!3.79e-16!42;UBERON:0004535!5.09e-15!110;UBERON:0004872!5.76e-15!84;UBERON:0000914!9.56e-15!83;UBERON:0002329!9.56e-15!83;UBERON:0003077!9.56e-15!83;UBERON:0003059!9.56e-15!83;UBERON:0007282!9.56e-15!83;UBERON:0009618!9.56e-15!83;UBERON:0007285!9.56e-15!83;UBERON:0001009!1.06e-13!113;UBERON:0003914!1.18e-13!118;UBERON:0000490!1.18e-13!138;UBERON:0003081!1.55e-13!216;UBERON:0004290!2.26e-13!70;UBERON:0000486!4.43e-13!82;UBERON:0005256!9.13e-13!143;UBERON:0001134!4.74e-12!61;UBERON:0002036!4.74e-12!61;UBERON:0003082!4.74e-12!61;UBERON:0002385!1.59e-11!63;UBERON:0001015!1.59e-11!63;UBERON:0000383!1.59e-11!63;UBERON:0004573!3.61e-11!33;UBERON:0004571!3.61e-11!33;UBERON:0002204!8.47e-10!167;UBERON:0000487!1.15e-09!22;UBERON:0001986!1.18e-09!18;UBERON:0004638!1.18e-09!18;UBERON:0004852!1.18e-09!18;UBERON:0004211!1.52e-07!16;UBERON:0001285!1.52e-07!16;UBERON:0007684!1.52e-07!16;UBERON:0003220!1.52e-07!16;UBERON:0004208!1.52e-07!16;UBERON:0006914!2.75e-07!25;UBERON:0002100!6.15e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;2.48e-12;74!UBERON:0007500;3.87e-12;56!UBERON:0001981;3.87e-12;56!UBERON:0004537;3.87e-12;56!UBERON:0001637;1.34e-11;42!UBERON:0003509;1.34e-11;42!UBERON:0004572;1.34e-11;42!UBERON:0000055;1.45e-10;65!UBERON:0004573;3.43e-10;33!UBERON:0004571;3.43e-10;33!UBERON:0002049;4.23e-10;75!UBERON:0007798;4.23e-10;75!UBERON:0000487;1.16e-09;22!UBERON:0004638;1.19e-09;18!UBERON:0001986;1.19e-09;18!UBERON:0004852;1.19e-09;18!UBERON:0000490;1.39e-08;33!UBERON:0006555;1.58e-08;15!UBERON:0004819;1.58e-08;15!UBERON:0001285;1.58e-08;15!UBERON:0007684;1.58e-08;15!UBERON:0006914;2.78e-07;25!UBERON:0000353;3.27e-07;15!UBERON:0001225;5.69e-07;12!UBERON:0008987;5.69e-07;12!UBERON:0000025;5.76e-07;93 | |||
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| ||
|short_description=p1@CFL1 | |||
}} | }} |
Latest revision as of 11:24, 19 September 2015
Short description: | p1@CFL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CFL1_5end |
Coexpression cluster: | C2155_Alveolar_Mesenchymal_Renal_Hair_Smooth_Fibroblast_Bronchial |
Association with transcript: | 5bp_to_ENST00000530945_5end |
EntrezGene: | CFL1 |
HGNC: | 1874 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.73e-26 | 121 |
embryonic cell | 1.66e-23 | 250 |
somatic stem cell | 8.49e-17 | 433 |
multi fate stem cell | 1.67e-16 | 427 |
stem cell | 5.85e-16 | 441 |
smooth muscle cell | 2.36e-15 | 43 |
smooth muscle myoblast | 2.36e-15 | 43 |
muscle precursor cell | 6.49e-15 | 58 |
myoblast | 6.49e-15 | 58 |
multi-potent skeletal muscle stem cell | 6.49e-15 | 58 |
vascular associated smooth muscle cell | 3.55e-14 | 32 |
muscle cell | 3.94e-14 | 55 |
electrically responsive cell | 7.13e-14 | 61 |
electrically active cell | 7.13e-14 | 61 |
endothelial cell | 1.86e-13 | 36 |
meso-epithelial cell | 1.16e-11 | 45 |
lining cell | 1.43e-10 | 58 |
barrier cell | 1.43e-10 | 58 |
endothelial cell of vascular tree | 1.55e-10 | 24 |
blood vessel endothelial cell | 1.18e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.18e-09 | 18 |
epithelial cell of nephron | 1.59e-08 | 15 |
kidney cell | 5.63e-07 | 17 |
kidney epithelial cell | 5.63e-07 | 17 |
kidney cortical cell | 5.71e-07 | 12 |
renal cortical epithelial cell | 5.71e-07 | 12 |
squamous epithelial cell | 7.53e-07 | 63 |