FFCP PHASE1:Hg19::chr7:73483893..73483905,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2006 | |EntrezGene=2006 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3327 | |HGNC=3327 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=99bp_to_AF086171_5end | |association_with_transcript=99bp_to_AF086171_5end | ||
|cluster_id=chr7:73483893..73483905,+ | |||
|coexpression_cluster_id=C2001 | |coexpression_cluster_id=C2001 | ||
|description=CAGE_peak_20_at_ELN_5end | |description=CAGE_peak_20_at_ELN_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000057!7.91e-12!75;CL:0002334!3.67e-09!12;CL:0002615!6.24e-09!3;CL:0002580!1.54e-08!3;CL:0002620!3.04e-08!23;CL:0002579!4.69e-08!3;CL:0000136!9.67e-08!15 | |ontology_enrichment_celltype=CL:0000057!7.91e-12!75;CL:0002334!3.67e-09!12;CL:0002615!6.24e-09!3;CL:0002580!1.54e-08!3;CL:0002620!3.04e-08!23;CL:0002579!4.69e-08!3;CL:0000136!9.67e-08!15 | ||
|ontology_enrichment_celltype_v019=CL:0002615;2.07e-34;3!CL:0000136;7.68e-31;13!CL:0002617;2.10e-23;2!CL:0002580;1.27e-15;3!CL:0002579;1.27e-15;3!CL:0002334;6.60e-15;12!CL:0002616;7.88e-13;1 | |ontology_enrichment_celltype_v019=CL:0002615;2.07e-34;3!CL:0000136;7.68e-31;13!CL:0002617;2.10e-23;2!CL:0002580;1.27e-15;3!CL:0002579;1.27e-15;3!CL:0002334;6.60e-15;12!CL:0002616;7.88e-13;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002615,2.75e-34,3;CL:0000136,1.12e-26,15;CL:0002617,1.78e-23,2;CL:0002580,1.22e-15,3;CL:0002579,1.77e-15,3;CL:0002334,7.63e-15,12;CL:0002616,7.89e-13,1;CL:0000057,2.36e-08,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!1.40e-15!12;UBERON:0000042!1.40e-15!12;UBERON:0003688!2.75e-15!6;UBERON:0002358!2.75e-15!6;UBERON:0003684!2.75e-15!6;UBERON:0001178!2.75e-15!6;UBERON:0001443!4.53e-08!11;UBERON:0002097!4.27e-07!40 | |ontology_enrichment_uberon=UBERON:0004457!1.40e-15!12;UBERON:0000042!1.40e-15!12;UBERON:0003688!2.75e-15!6;UBERON:0002358!2.75e-15!6;UBERON:0003684!2.75e-15!6;UBERON:0001178!2.75e-15!6;UBERON:0001443!4.53e-08!11;UBERON:0002097!4.27e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.90e-46;6!UBERON:0002358;2.90e-46;6!UBERON:0003684;2.90e-46;6!UBERON:0001178;2.90e-46;6!UBERON:0004457;6.93e-31;9!UBERON:0000042;6.93e-31;9!UBERON:0000310;5.10e-18;10!UBERON:0001443;2.08e-16;11!UBERON:0005406;4.82e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0003688;2.90e-46;6!UBERON:0002358;2.90e-46;6!UBERON:0003684;2.90e-46;6!UBERON:0001178;2.90e-46;6!UBERON:0004457;6.93e-31;9!UBERON:0000042;6.93e-31;9!UBERON:0000310;5.10e-18;10!UBERON:0001443;2.08e-16;11!UBERON:0005406;4.82e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.58e-46,6;UBERON:0002358,5.58e-46,6;UBERON:0003684,5.58e-46,6;UBERON:0001178,5.58e-46,6;UBERON:0004457,4.86e-23,12;UBERON:0000042,4.86e-23,12;UBERON:0000310,4.67e-18,10;UBERON:0001443,1.92e-16,11;UBERON:0009569,1.47e-08,112;UBERON:0005406,4.83e-07,2 | |||
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| ||
|short_description=p20@ELN | |short_description=p20@ELN | ||
}} | }} |
Latest revision as of 11:10, 19 September 2015
Short description: | p20@ELN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_ELN_5end |
Coexpression cluster: | C2001_Chondrocyte_Adipocyte_Preadipocyte_basal_trachea_Fibroblast_Multipotent |
Association with transcript: | 99bp_to_AF086171_5end |
EntrezGene: | ELN |
HGNC: | 3327 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 2.75e-34 | 3 |
fat cell | 1.12e-26 | 15 |
adipocyte of breast | 1.78e-23 | 2 |
preadipocyte of the breast | 1.22e-15 | 3 |
omentum preadipocyte | 1.77e-15 | 3 |
preadipocyte | 7.63e-15 | 12 |
perirenal adipocyte cell | 7.89e-13 | 1 |
fibroblast | 2.36e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.58e-46 | 6 |
peritoneum | 5.58e-46 | 6 |
abdominal cavity | 5.58e-46 | 6 |
visceral peritoneum | 5.58e-46 | 6 |
cavity lining | 4.86e-23 | 12 |
serous membrane | 4.86e-23 | 12 |
breast | 4.67e-18 | 10 |
chest | 1.92e-16 | 11 |
subdivision of trunk | 1.47e-08 | 112 |
perirenal fat | 4.83e-07 | 2 |