FFCP PHASE1:Hg19::chr7:73483893..73483905,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2006 | |EntrezGene=2006 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3327 | |HGNC=3327 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=99bp_to_AF086171_5end | |association_with_transcript=99bp_to_AF086171_5end | ||
|cluster_id=chr7:73483893..73483905,+ | |||
|coexpression_cluster_id=C2001 | |coexpression_cluster_id=C2001 | ||
|description=CAGE_peak_20_at_ELN_5end | |description=CAGE_peak_20_at_ELN_5end | ||
|id=chr7:73483893..73483905,+ | |id=chr7:73483893..73483905,+ | ||
|ontology_enrichment_celltype=CL:0000057!7.91e-12!75;CL:0002334!3.67e-09!12;CL:0002615!6.24e-09!3;CL:0002580!1.54e-08!3;CL:0002620!3.04e-08!23;CL:0002579!4.69e-08!3;CL:0000136!9.67e-08!15 | |ontology_enrichment_celltype=CL:0000057!7.91e-12!75;CL:0002334!3.67e-09!12;CL:0002615!6.24e-09!3;CL:0002580!1.54e-08!3;CL:0002620!3.04e-08!23;CL:0002579!4.69e-08!3;CL:0000136!9.67e-08!15 | ||
|ontology_enrichment_celltype_v019=CL:0002615;2.07e-34;3!CL:0000136;7.68e-31;13!CL:0002617;2.10e-23;2!CL:0002580;1.27e-15;3!CL:0002579;1.27e-15;3!CL:0002334;6.60e-15;12!CL:0002616;7.88e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,2.75e-34,3;CL:0000136,1.12e-26,15;CL:0002617,1.78e-23,2;CL:0002580,1.22e-15,3;CL:0002579,1.77e-15,3;CL:0002334,7.63e-15,12;CL:0002616,7.89e-13,1;CL:0000057,2.36e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!1.40e-15!12;UBERON:0000042!1.40e-15!12;UBERON:0003688!2.75e-15!6;UBERON:0002358!2.75e-15!6;UBERON:0003684!2.75e-15!6;UBERON:0001178!2.75e-15!6;UBERON:0001443!4.53e-08!11;UBERON:0002097!4.27e-07!40 | |ontology_enrichment_uberon=UBERON:0004457!1.40e-15!12;UBERON:0000042!1.40e-15!12;UBERON:0003688!2.75e-15!6;UBERON:0002358!2.75e-15!6;UBERON:0003684!2.75e-15!6;UBERON:0001178!2.75e-15!6;UBERON:0001443!4.53e-08!11;UBERON:0002097!4.27e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.90e-46;6!UBERON:0002358;2.90e-46;6!UBERON:0003684;2.90e-46;6!UBERON:0001178;2.90e-46;6!UBERON:0004457;6.93e-31;9!UBERON:0000042;6.93e-31;9!UBERON:0000310;5.10e-18;10!UBERON:0001443;2.08e-16;11!UBERON:0005406;4.82e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.58e-46,6;UBERON:0002358,5.58e-46,6;UBERON:0003684,5.58e-46,6;UBERON:0001178,5.58e-46,6;UBERON:0004457,4.86e-23,12;UBERON:0000042,4.86e-23,12;UBERON:0000310,4.67e-18,10;UBERON:0001443,1.92e-16,11;UBERON:0009569,1.47e-08,112;UBERON:0005406,4.83e-07,2 | |||
|phase1_expression=4.36028110249336,2.78330681058278,6.62485699251064,2.00146596706261,6.25745532198203,7.85104671690332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2889311810753,0,0.434539556882471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,1.22595118319608,0.300476117813194,0,2.69084453533293,0.213557388818567,0.211931901159562,0,0,0.515281080091258,0,0,0.194874010322397,0.504867548488229,0.368199594569197,0,2.4850671476163,0.302256294682921,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67737398844108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.315404830067869,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,2.97729369382532,0.61384789315225,1.12264037773229,2.17836553734692,1.02341449813341,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0.987884678879706,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0.933118762985422,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,1.12990370390266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687481272035051,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0.471612915298998,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.8453114551668,0.169927114687817,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0.371995018166751,0,1.73050624849516,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,0.606351566874658,0,0.342233301085281,0,0,0.99798106963804,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=4.36028110249336,2.78330681058278,6.62485699251064,2.00146596706261,6.25745532198203,7.85104671690332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2889311810753,0,0.434539556882471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,1.22595118319608,0.300476117813194,0,2.69084453533293,0.213557388818567,0.211931901159562,0,0,0.515281080091258,0,0,0.194874010322397,0.504867548488229,0.368199594569197,0,2.4850671476163,0.302256294682921,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67737398844108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.315404830067869,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,2.97729369382532,0.61384789315225,1.12264037773229,2.17836553734692,1.02341449813341,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0.987884678879706,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0.933118762985422,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,1.12990370390266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687481272035051,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0.471612915298998,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.8453114551668,0.169927114687817,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0.371995018166751,0,1.73050624849516,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,0.606351566874658,0,0.342233301085281,0,0,0.99798106963804,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p20@ELN | |short_description=p20@ELN | ||
}} | }} |
Latest revision as of 11:10, 19 September 2015
Short description: | p20@ELN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_ELN_5end |
Coexpression cluster: | C2001_Chondrocyte_Adipocyte_Preadipocyte_basal_trachea_Fibroblast_Multipotent |
Association with transcript: | 99bp_to_AF086171_5end |
EntrezGene: | ELN |
HGNC: | 3327 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 2.75e-34 | 3 |
fat cell | 1.12e-26 | 15 |
adipocyte of breast | 1.78e-23 | 2 |
preadipocyte of the breast | 1.22e-15 | 3 |
omentum preadipocyte | 1.77e-15 | 3 |
preadipocyte | 7.63e-15 | 12 |
perirenal adipocyte cell | 7.89e-13 | 1 |
fibroblast | 2.36e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.58e-46 | 6 |
peritoneum | 5.58e-46 | 6 |
abdominal cavity | 5.58e-46 | 6 |
visceral peritoneum | 5.58e-46 | 6 |
cavity lining | 4.86e-23 | 12 |
serous membrane | 4.86e-23 | 12 |
breast | 4.67e-18 | 10 |
chest | 1.92e-16 | 11 |
subdivision of trunk | 1.47e-08 | 112 |
perirenal fat | 4.83e-07 | 2 |