FFCP PHASE1:Hg19::chr7:73483509..73483536,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2006 | |EntrezGene=2006 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3327 | |HGNC=3327 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-257bp_to_AF086171_5end | |association_with_transcript=-257bp_to_AF086171_5end | ||
|cluster_id=chr7:73483509..73483536,+ | |||
|coexpression_cluster_id=C379 | |coexpression_cluster_id=C379 | ||
|description=CAGE_peak_10_at_ELN_5end | |description=CAGE_peak_10_at_ELN_5end | ||
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|ontology_enrichment_celltype=CL:0000057!2.22e-11!75;CL:0000136!6.20e-09!15;CL:0000055!3.04e-08!180;CL:0002620!4.44e-08!23;CL:0000153!6.96e-08!9;CL:0000447!6.96e-08!9;CL:0002334!3.22e-07!12 | |ontology_enrichment_celltype=CL:0000057!2.22e-11!75;CL:0000136!6.20e-09!15;CL:0000055!3.04e-08!180;CL:0002620!4.44e-08!23;CL:0000153!6.96e-08!9;CL:0000447!6.96e-08!9;CL:0002334!3.22e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.03e-12;12!CL:0000136;2.22e-12;13!CL:0000153;2.85e-12;9!CL:0000447;2.85e-12;9!CL:0002615;1.39e-11;3!CL:0002580;3.30e-11;3!CL:0000135;1.63e-10;3!CL:0002579;1.63e-10;3!CL:0000388;1.63e-10;3!CL:0000138;1.25e-08;6!CL:0002617;4.04e-08;2!CL:0000499;1.11e-07;28!CL:0000327;4.37e-07;15 | |ontology_enrichment_celltype_v019=CL:0002334;1.03e-12;12!CL:0000136;2.22e-12;13!CL:0000153;2.85e-12;9!CL:0000447;2.85e-12;9!CL:0002615;1.39e-11;3!CL:0002580;3.30e-11;3!CL:0000135;1.63e-10;3!CL:0002579;1.63e-10;3!CL:0000388;1.63e-10;3!CL:0000138;1.25e-08;6!CL:0002617;4.04e-08;2!CL:0000499;1.11e-07;28!CL:0000327;4.37e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.22e-13,76;CL:0002334,9.37e-13,12;CL:0000153,2.22e-12,9;CL:0000447,2.22e-12,9;CL:0002615,1.44e-11,3;CL:0002580,2.85e-11,3;CL:0000136,1.33e-10,15;CL:0002579,1.80e-10,3;CL:0000135,1.92e-10,3;CL:0000388,1.92e-10,3;CL:0000058,1.18e-08,6;CL:0000138,1.18e-08,6;CL:0002617,3.72e-08,2;CL:0000499,1.04e-07,28;CL:0000327,3.79e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.12e-07;2 | |ontology_enrichment_development_v019=UBERON:0006965;2.12e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!3.03e-11!12;UBERON:0000042!3.03e-11!12;UBERON:0003688!3.72e-10!6;UBERON:0002358!3.72e-10!6;UBERON:0003684!3.72e-10!6;UBERON:0001178!3.72e-10!6;UBERON:0000475!7.27e-07!365;UBERON:0002199!7.89e-07!45;UBERON:0002416!7.89e-07!45 | |ontology_enrichment_uberon=UBERON:0004457!3.03e-11!12;UBERON:0000042!3.03e-11!12;UBERON:0003688!3.72e-10!6;UBERON:0002358!3.72e-10!6;UBERON:0003684!3.72e-10!6;UBERON:0001178!3.72e-10!6;UBERON:0000475!7.27e-07!365;UBERON:0002199!7.89e-07!45;UBERON:0002416!7.89e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.27e-23;9!UBERON:0000042;4.27e-23;9!UBERON:0003688;2.37e-20;6!UBERON:0002358;2.37e-20;6!UBERON:0003684;2.37e-20;6!UBERON:0001178;2.37e-20;6!UBERON:0001443;5.13e-11;11!UBERON:0007846;1.63e-10;3!UBERON:0000043;1.63e-10;3!UBERON:0007845;1.63e-10;3!UBERON:0000310;1.35e-08;10!UBERON:0005406;1.78e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0004457;4.27e-23;9!UBERON:0000042;4.27e-23;9!UBERON:0003688;2.37e-20;6!UBERON:0002358;2.37e-20;6!UBERON:0003684;2.37e-20;6!UBERON:0001178;2.37e-20;6!UBERON:0001443;5.13e-11;11!UBERON:0007846;1.63e-10;3!UBERON:0000043;1.63e-10;3!UBERON:0007845;1.63e-10;3!UBERON:0000310;1.35e-08;10!UBERON:0005406;1.78e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.72e-20,6;UBERON:0002358,2.72e-20,6;UBERON:0003684,2.72e-20,6;UBERON:0001178,2.72e-20,6;UBERON:0004457,5.36e-17,12;UBERON:0000042,5.36e-17,12;UBERON:0001443,4.51e-11,11;UBERON:0007846,1.92e-10,3;UBERON:0000043,1.92e-10,3;UBERON:0007845,1.92e-10,3;UBERON:0000310,1.21e-08,10;UBERON:0005406,1.56e-07,2 | |||
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| ||
|short_description=p10@ELN | |short_description=p10@ELN | ||
}} | }} |
Latest revision as of 11:01, 19 September 2015
Short description: | p10@ELN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ELN_5end |
Coexpression cluster: | C379_Preadipocyte_Adipocyte_tenocyte_Chondrocyte_basal_aorta_trachea |
Association with transcript: | -257bp_to_AF086171_5end |
EntrezGene: | ELN |
HGNC: | 3327 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.22e-13 | 76 |
preadipocyte | 9.37e-13 | 12 |
GAG secreting cell | 2.22e-12 | 9 |
carbohydrate secreting cell | 2.22e-12 | 9 |
adipocyte of omentum tissue | 1.44e-11 | 3 |
preadipocyte of the breast | 2.85e-11 | 3 |
fat cell | 1.33e-10 | 15 |
omentum preadipocyte | 1.80e-10 | 3 |
fibrocyte | 1.92e-10 | 3 |
tendon cell | 1.92e-10 | 3 |
chondroblast | 1.18e-08 | 6 |
chondrocyte | 1.18e-08 | 6 |
adipocyte of breast | 3.72e-08 | 2 |
stromal cell | 1.04e-07 | 28 |
extracellular matrix secreting cell | 3.79e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.72e-20 | 6 |
peritoneum | 2.72e-20 | 6 |
abdominal cavity | 2.72e-20 | 6 |
visceral peritoneum | 2.72e-20 | 6 |
cavity lining | 5.36e-17 | 12 |
serous membrane | 5.36e-17 | 12 |
chest | 4.51e-11 | 11 |
dense regular connective tissue | 1.92e-10 | 3 |
tendon | 1.92e-10 | 3 |
regular connective tissue | 1.92e-10 | 3 |
breast | 1.21e-08 | 10 |
perirenal fat | 1.56e-07 | 2 |