FFCP PHASE1:Hg19::chr19:50836762..50836777,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3748 | |EntrezGene=3748 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6235 | |HGNC=6235 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZSE9,E9PQY4 | |UniProt=Q6ZSE9,E9PQY4 | ||
|association_with_transcript=0bp_to_ENST00000391818,ENST00000474951_5end | |association_with_transcript=0bp_to_ENST00000391818,ENST00000474951_5end | ||
|cluster_id=chr19:50836762..50836777,- | |||
|description=CAGE_peak_5_at_KCNC3_5end | |description=CAGE_peak_5_at_KCNC3_5end | ||
|id=chr19:50836762..50836777,- | |id=chr19:50836762..50836777,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;3.40e-11;1!UBERON:0008425;3.40e-11;1!UBERON:0007123;1.79e-08;5 | |ontology_enrichment_development_v019=UBERON:0005754;3.40e-11;1!UBERON:0008425;3.40e-11;1!UBERON:0007123;1.79e-08;5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-24!115;UBERON:0001049!1.24e-17!57;UBERON:0005068!1.24e-17!57;UBERON:0006241!1.24e-17!57;UBERON:0007135!1.24e-17!57;UBERON:0003075!7.85e-15!86;UBERON:0007284!7.85e-15!86;UBERON:0002616!1.17e-14!59;UBERON:0005743!1.95e-14!86;UBERON:0002780!3.41e-14!41;UBERON:0001890!3.41e-14!41;UBERON:0006240!3.41e-14!41;UBERON:0001017!5.75e-14!82;UBERON:0003080!1.24e-13!42;UBERON:0002346!1.67e-13!90;UBERON:0000955!2.52e-13!69;UBERON:0006238!2.52e-13!69;UBERON:0000073!2.02e-12!94;UBERON:0001016!2.02e-12!94;UBERON:0003056!8.18e-12!61;UBERON:0002619!5.76e-11!22;UBERON:0001950!7.97e-11!20;UBERON:0001893!3.33e-10!34;UBERON:0002020!4.31e-10!34;UBERON:0003528!4.31e-10!34;UBERON:0001869!5.64e-10!32;UBERON:0002791!1.68e-09!33;UBERON:0000956!4.87e-09!25;UBERON:0000203!4.87e-09!25;UBERON:0000153!1.53e-08!129;UBERON:0007811!1.53e-08!129;UBERON:0000033!1.70e-07!123;UBERON:0000062!1.87e-07!511;UBERON:0001871!9.29e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!1.22e-24!115;UBERON:0001049!1.24e-17!57;UBERON:0005068!1.24e-17!57;UBERON:0006241!1.24e-17!57;UBERON:0007135!1.24e-17!57;UBERON:0003075!7.85e-15!86;UBERON:0007284!7.85e-15!86;UBERON:0002616!1.17e-14!59;UBERON:0005743!1.95e-14!86;UBERON:0002780!3.41e-14!41;UBERON:0001890!3.41e-14!41;UBERON:0006240!3.41e-14!41;UBERON:0001017!5.75e-14!82;UBERON:0003080!1.24e-13!42;UBERON:0002346!1.67e-13!90;UBERON:0000955!2.52e-13!69;UBERON:0006238!2.52e-13!69;UBERON:0000073!2.02e-12!94;UBERON:0001016!2.02e-12!94;UBERON:0003056!8.18e-12!61;UBERON:0002619!5.76e-11!22;UBERON:0001950!7.97e-11!20;UBERON:0001893!3.33e-10!34;UBERON:0002020!4.31e-10!34;UBERON:0003528!4.31e-10!34;UBERON:0001869!5.64e-10!32;UBERON:0002791!1.68e-09!33;UBERON:0000956!4.87e-09!25;UBERON:0000203!4.87e-09!25;UBERON:0000153!1.53e-08!129;UBERON:0007811!1.53e-08!129;UBERON:0000033!1.70e-07!123;UBERON:0000062!1.87e-07!511;UBERON:0001871!9.29e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;2.24e-22;4!UBERON:0010133;2.24e-22;4!UBERON:0000007;1.25e-20;2!UBERON:0006947;8.42e-14;3!UBERON:0004054;8.42e-14;3!UBERON:0001894;4.76e-13;7!UBERON:0000998;3.40e-11;1!UBERON:0006868;3.40e-11;1!UBERON:0002581;9.04e-11;1!UBERON:0001000;9.04e-11;1!UBERON:0005352;9.04e-11;1!UBERON:0005904;1.40e-10;4!UBERON:0002046;1.79e-08;5!UBERON:0001872;1.79e-08;5!UBERON:0000955;2.40e-07;68!UBERON:0000200;3.35e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0003296;2.24e-22;4!UBERON:0010133;2.24e-22;4!UBERON:0000007;1.25e-20;2!UBERON:0006947;8.42e-14;3!UBERON:0004054;8.42e-14;3!UBERON:0001894;4.76e-13;7!UBERON:0000998;3.40e-11;1!UBERON:0006868;3.40e-11;1!UBERON:0002581;9.04e-11;1!UBERON:0001000;9.04e-11;1!UBERON:0005352;9.04e-11;1!UBERON:0005904;1.40e-10;4!UBERON:0002046;1.79e-08;5!UBERON:0001872;1.79e-08;5!UBERON:0000955;2.40e-07;68!UBERON:0000200;3.35e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,3.23e-22,4;UBERON:0010133,3.23e-22,4;UBERON:0000007,1.26e-20,2;UBERON:0006947,5.04e-14,3;UBERON:0004054,5.04e-14,3;UBERON:0001894,5.85e-13,7;UBERON:0006222,5.85e-13,7;UBERON:0000998,2.79e-11,1;UBERON:0006868,2.79e-11,1;UBERON:0001000,5.05e-11,1;UBERON:0005352,5.05e-11,1;UBERON:0002581,8.22e-11,1;UBERON:0005904,9.52e-11,4;UBERON:0002046,1.66e-08,5;UBERON:0004117,1.66e-08,5;UBERON:0007689,1.66e-08,5;UBERON:0007123,1.66e-08,5;UBERON:0003091,1.66e-08,5;UBERON:0001872,2.24e-08,5;UBERON:0000073,6.92e-08,53;UBERON:0002616,6.92e-08,53;UBERON:0000955,9.99e-08,68;UBERON:0006238,9.99e-08,68;UBERON:0002780,1.09e-07,41;UBERON:0001890,1.09e-07,41;UBERON:0003080,1.09e-07,41;UBERON:0006240,1.09e-07,41;UBERON:0001049,1.97e-07,56;UBERON:0005068,1.97e-07,56;UBERON:0006241,1.97e-07,56;UBERON:0007135,1.97e-07,56;UBERON:0002530,2.79e-07,59;UBERON:0000200,3.46e-07,6;UBERON:0007023,7.30e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0.671746422719773,0,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0.545812300115692,0,0,0,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0,0,0.605399502633369,0.368277635987565,0,0.211255286311942,0,0.209658645508376,0.22465726229299,0,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0.541607727530031,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.654895377488563,0.364295288292542,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,1.10689594688802,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0.231860809950154,0.234817388471643,0,0,0,0,0,0.492434012174795,0.468008530278475,0.594524649154913,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0.213455115606889,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0.308061348417659,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0.1605880751037,0.201799707191048,1.27753871307098,0,0.307240764308458,0.447352215784832,0.333698283423817,0,0,0,0,0,0,0.561421621224659,0,0.36408156524854,0.111443384277478,0,0.71623345421307,0.593929361665277,0.614321404198464,0.994147647766298,0.844016498463076,0,1.97764649072111,0,0.398495976502139,0.276283915531148,0.503865495708552,0,0,0,0.179736702294654,0,2.04628948090749,0.197286811273867,0,0,0,0.463840490809256,3.99227596002388,0.260427761085233,2.18649999990489,0,0,0.508507300585533,0,0,0,0,0,0.241192877250816,0,0.774054819518572,1.77328571372128,0.438770794307945,0,0,0.0769502585037971,0,0.922255617552241,0.718061155278177,0.108647371922008,0.31900115973192,0.366390373607449,0,0,0,0,0.451191321234361,0.392125068635479,0,0,0.158936578980379,0,0.163232808159148,0.424059214301822,0,0.995261931078505,0,0,1.48260564340311,0.370691816839509,0.104421949505455,0.67401132980677,0,0.234264445725339,0,0.391329237864179,0,1.97292201424695,0,0.61214552326098,0.505492637027904,0.150323419414493,0,0,0,0.313932918407225,0,0,0.693373365065693,0,0,0.261177619741208,0.698906672968121,0.51595809741485,0,0,0,0,0.176512253383001,0.451961481561065,0,0,0.696418755514666,0.195551382734803,0.561111741760736,0,0.999048047910651,0,0.80175617316141,0.171594997861965,0,0,0,0.407712618220842,0,0,0,0,0.273810757783986,0,0,0.262887354279314,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0.817220436669454,0,0,0.415440338029185,0,0,0.91124334987037,0,0.394028536495991,1.36381929150995,0.950403028674658,0,0.575745591958336,0,0,0.25426853765475,0,0,0,0,0,0,0,0.58620893471233,0,0.517131825446202,0.52893040697076,0.171086837884329,0,0,0.78602152549833,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0.488105059607853,0.250381861413,0.573409195690071,0.221858103073705,0.372578417648301,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0.389720617678777,0.132864840313363,0.817826971279221,0,0,0,0.79994958341972,0.106691729694141,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0.834979926253974,0,0.159633859057151,0.615349092722265,0.504143392443436,0.622415272177961,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0.295712172434091,0.607838261565552,0,1.03343398250592,0.634158101939068,0,0,0,0,0,1.07140367175657,0.672567444437648,2.42786241694653,2.04895972216168,0.177404740325278,0.115233987555779,0,0.815636795721981,1.31545547125698,0.118193840883968,0,0.313972371402056,0,0.560544326627578,0,0,0,0.78624198594322,0,0,0.173858272302579,0,0,0,0,0,0,0,2.54032230114557,0.22910686854405,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0,0.150962843566674,0.0771741581079447,0,0.940634592723046,0.245148321753905,0.471353094203252,0.196308467114945,0.297046400327086,0,0,0,0.193373663920732,0,0.178553938605658,0,0,0,0,0,0,0.883889372481891,1.30905207102113,0.5290268405154,0,0,0,0.126166424835079,0,0,0,0,0,0,0.07577869821823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| ||
|short_description=p5@KCNC3 | |short_description=p5@KCNC3 | ||
}} | }} |
Latest revision as of 10:54, 19 September 2015
Short description: | p5@KCNC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KCNC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000391818, ENST00000474951_5end |
EntrezGene: | KCNC3 |
HGNC: | 6235 |
UniProt: | Q6ZSE9E9PQY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 3.23e-22 | 4 |
neuroendocrine gland | 3.23e-22 | 4 |
pituitary gland | 1.26e-20 | 2 |
male genital duct | 5.04e-14 | 3 |
internal male genitalia | 5.04e-14 | 3 |
diencephalon | 5.85e-13 | 7 |
future diencephalon | 5.85e-13 | 7 |
seminal vesicle | 2.79e-11 | 1 |
seminal fluid secreting gland | 2.79e-11 | 1 |
vas deferens | 5.05e-11 | 1 |
spermatic cord | 5.05e-11 | 1 |
postcentral gyrus | 8.22e-11 | 1 |
duct of male reproductive system | 9.52e-11 | 4 |
thyroid gland | 1.66e-08 | 5 |
pharyngeal pouch | 1.66e-08 | 5 |
thyroid diverticulum | 1.66e-08 | 5 |
pharyngeal pouch 2 | 1.66e-08 | 5 |
thyroid primordium | 1.66e-08 | 5 |
parietal lobe | 2.24e-08 | 5 |
regional part of nervous system | 6.92e-08 | 53 |
regional part of brain | 6.92e-08 | 53 |
brain | 9.99e-08 | 68 |
future brain | 9.99e-08 | 68 |
regional part of forebrain | 1.09e-07 | 41 |
forebrain | 1.09e-07 | 41 |
anterior neural tube | 1.09e-07 | 41 |
future forebrain | 1.09e-07 | 41 |
neural tube | 1.97e-07 | 56 |
neural rod | 1.97e-07 | 56 |
future spinal cord | 1.97e-07 | 56 |
neural keel | 1.97e-07 | 56 |
gland | 2.79e-07 | 59 |
gyrus | 3.46e-07 | 6 |
adult organism | 7.30e-07 | 114 |